Histone deacetylase 1 (HDAC1) is an
enzyme
An enzyme () is a protein that acts as a biological catalyst by accelerating chemical reactions. The molecules upon which enzymes may act are called substrate (chemistry), substrates, and the enzyme converts the substrates into different mol ...
that in humans is encoded by the ''HDAC1''
gene
In biology, the word gene has two meanings. The Mendelian gene is a basic unit of heredity. The molecular gene is a sequence of nucleotides in DNA that is transcribed to produce a functional RNA. There are two types of molecular genes: protei ...
.
Function
Histone acetylation and deacetylation
Histone acetylation and deacetylation are the processes by which the lysine residues within the N-terminus, N-terminal tail protruding from the histone core of the nucleosome are acetylated and deacetylated as part of gene regulation.
Histone acet ...
, catalyzed by multisubunit complexes, play a key role in the regulation of
eukaryotic
The eukaryotes ( ) constitute the Domain (biology), domain of Eukaryota or Eukarya, organisms whose Cell (biology), cells have a membrane-bound cell nucleus, nucleus. All animals, plants, Fungus, fungi, seaweeds, and many unicellular organisms ...
gene expression. The protein encoded by this gene belongs to the histone deacetylase/acuc/apha family and is a component of the histone deacetylase complex. It also interacts with
retinoblastoma
Retinoblastoma (Rb) is a rare form of cancer that rapidly develops from the immature cells of a retina, the light-detecting tissue of the eye. It is the most common primary malignant intraocular cancer in children, and 80% of retinoblastoma cas ...
tumor-suppressor protein and this complex is a key element in the control of cell proliferation and differentiation. Together with metastasis-associated protein-2
MTA2
Metastasis-associated protein MTA2 is a protein that in humans is encoded by the ''MTA2'' gene.
MTA2 is the second member of the MTA family of genes. MTA2 protein localizes in the nucleus and is a component of the nucleosome remodeling and the ...
, it deacetylates
p53
p53, also known as tumor protein p53, cellular tumor antigen p53 (UniProt name), or transformation-related protein 53 (TRP53) is a regulatory transcription factor protein that is often mutated in human cancers. The p53 proteins (originally thou ...
and modulates its effect on cell growth and apoptosis.
Interactions
HDAC1 has been shown to
interact with:
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Androgen receptor
The androgen receptor (AR), also known as NR3C4 (nuclear receptor subfamily 3, group C, member 4), is a type of nuclear receptor that is activated by binding any of the androgenic hormones, including testosterone and dihydrotestosterone, in th ...
,
*
BCL6
Bcl-6 (B-cell lymphoma 6) is a protein that in humans is encoded by the ''BCL6'' gene. BCL6 is a master transcription factor for regulation of T follicular helper cells (TFH cells) proliferation. BCL6 has three evolutionary conserved structural d ...
,
*
BTG2
Protein BTG2 also known as BTG family member 2 or NGF-inducible anti-proliferative protein PC3 or NGF-inducible protein TIS21, is a protein that in humans is encoded by the ''BTG2'' gene (B-cell translocation gene 2) and in other mammals by the ho ...
,
*
BUB1B
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta is an enzyme that in humans is encoded by the ''BUB1B'' gene. Also known as BubR1, this protein is recognized for its mitotic roles in the spindle assembly checkpoint (SAC) and kinetoch ...
,
*
BUB1
Mitotic checkpoint serine/threonine-protein kinase BUB1 also known as BUB1 (budding uninhibited by benzimidazoles 1) is an enzyme that in humans is encoded by the ''BUB1'' gene.
Bub1 is a serine/threonine protein kinase first identified in genet ...
,
*
BUB3
Mitotic checkpoint protein BUB3 is a protein that in humans is encoded by the ''BUB3'' gene.
Bub3 is a protein involved with the regulation of the Spindle Assembly Checkpoint (SAC); though BUB3 is non-essential in yeast, it is essential in highe ...
,
*
CBFA2T3
Protein CBFA2T3 (core-binding factor, runt domain, alpha subunit 2; translocated to, 3) is a protein that in humans is encoded by the ''CBFA2T3'' gene.
Function
The t(16;21)(q24;q22) translocation is a rare but recurrent chromosomal abnormali ...
,
*
CDC20
The cell division cycle protein 20 homolog is an essential regulator of cell division that is encoded by the ''CDC20'' gene in humans. To the best of current knowledge its most important function is to activate the anaphase promoting complex (AP ...
,
*
CDH1,
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CHD3
Chromodomain-helicase-DNA-binding protein 3 is an enzyme that in humans is encoded by the ''CHD3'' gene
In biology, the word gene has two meanings. The Mendelian gene is a basic unit of heredity. The molecular gene is a sequence of nucleot ...
,
*
CHD4
Chromodomain-helicase-DNA-binding protein 4 is an enzyme that in humans is encoded by the ''CHD4'' gene
In biology, the word gene has two meanings. The Mendelian gene is a basic unit of heredity. The molecular gene is a sequence of nucleo ...
,
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COUP-TFII,
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CTBP1,
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DDX17,
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DDX5,
*
DNMT3A,
*
DNMT3L,
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Death-associated protein 6,
*
EED,
*
EVI1,
*
EZH2,
*
FKBP3,
*
GATA1
GATA-binding factor 1 or GATA-1 (also termed Erythroid transcription factor) is the founding member of the GATA family of transcription factors. This protein is widely expressed throughout vertebrate species. In humans and mice, it is encoded b ...
,
*
HMG20B,
*
HSPA4
Heat shock 70 kDa protein 4 is a protein that in humans is encoded by the ''HSPA4'' gene.
The protein
Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residue (biochemistry), residues. ...
,
*
HUS1,
*
Histone deacetylase 2,
*
Homeobox protein TGIF1,
*
Host cell factor C1
Host cell factor 1 (HCFC1, HCF1, or HCF-1), also known as VP16-accessory protein, is a protein that in humans is encoded by the ''HCFC1'' gene.
Structure
HCF1 is a member of the highly conserved host cell factor family and encodes a protein wi ...
,
*
IFRD1,
*
IKZF1,
*
ING1,
*
MBD3
Methyl-CpG-binding domain protein 3 is a protein that in humans is encoded by the ''MBD3'' gene.
Function
DNA methylation is the major modification of eukaryotic genomes and plays an essential role in mammalian development. Human proteins ME ...
,
*
MIER1,
*
MLL,
*
MTA1
Metastasis-associated protein MTA1 is a protein that in humans is encoded by the ''MTA1'' gene. MTA1 is the founding member of the MTA family of genes. MTA1 is primarily localized in the nucleus but also found to be distributed in the extra-nuc ...
,
*
MTA2
Metastasis-associated protein MTA2 is a protein that in humans is encoded by the ''MTA2'' gene.
MTA2 is the second member of the MTA family of genes. MTA2 protein localizes in the nucleus and is a component of the nucleosome remodeling and the ...
,
*
Mad1,
*
Mdm2,
*
Methyl-CpG-binding domain protein 2,
*
Mothers against decapentaplegic homolog 2
Mothers against decapentaplegic homolog 2, also known as SMAD family member 2 or SMAD2, is a protein that in humans is encoded by the ''SMAD2'' gene. MAD homolog 2 belongs to the SMAD, a family of proteins similar to the gene products of the ''Dr ...
,
*
MyoD
MyoD, also known as myoblast determination protein 1, is a protein in animals that plays a major role in regulating muscle differentiation. MyoD, which was discovered in the laboratory of Harold M. Weintraub, belongs to a family of proteins kn ...
,
*
NFKB1,
*
Nuclear receptor co-repressor 2
The nuclear receptor co-repressor 2 () is a transcriptional coregulatory protein that contains several nuclear receptor-interacting domains. In addition, NCOR2 appears to recruit histone deacetylases to DNA promoter regions. Hence NCOR2 assist ...
,
*
P21,
*
PCNA
Proliferating cell nuclear antigen (PCNA) is a DNA clamp that acts as a processivity factor for DNA polymerase delta, DNA polymerase δ in eukaryotic cell (biology), cells and is essential for replication. PCNA is a homotrimer and achieves its ...
,
*
PHF21A,
*
Prohibitin,
*
Promyelocytic leukemia protein
Promyelocytic leukemia protein (PML) (also known as MYL, RNF71, PP8675 or TRIM19) is the protein product of the ''PML'' gene. PML protein is a tumor suppressor protein required for the assembly of a number of nuclear structures, called PML-nucle ...
,
*
RAD9A
Cell cycle checkpoint control protein RAD9A is a protein that in humans is encoded by the ''RAD9A'' gene.''Rad9'' has been shown to induce G2 arrest in the cell cycle in response to DNA damage in yeast cells. ''Rad9'' was originally found in budd ...
,
*
RBBP4,
*
RBBP7
Histone-binding protein RBBP7 is a protein that in humans is encoded by the ''RBBP7'' gene.
Function
This protein is a ubiquitously expressed nuclear protein and belongs to a highly conserved subfamily of WD-repeat proteins. It is found amon ...
,
*
RCOR1,
*
RELA
Transcription factor p65 also known as nuclear factor NF-kappa-B p65 subunit is a protein that in humans is encoded by the ''RELA'' gene.
RELA, also known as p65, is a REL-associated protein involved in NF-κB heterodimer formation, nuclear tra ...
,
*
RFC1,
*
Retinoblastoma protein
Retinoblastoma (Rb) is a rare form of cancer that rapidly develops from the immature cells of a retina, the light-detecting tissue of the eye. It is the most common primary malignant intraocular cancer in children, and 80% of retinoblastoma cas ...
,
*
Retinoblastoma-like protein 1,
*
Retinoblastoma-like protein 2,
*
SAP30,
*
SATB1,
*
SIN3A
Paired amphipathic helix protein Sin3a is a protein that in humans is encoded by the ''SIN3A'' gene.
Function
The protein encoded by this gene is a transcriptional regulatory protein. It contains paired amphipathic helix (PAH) domains, whic ...
,
*
SIN3B,
*
SPEN Spen may refer to:
*SPEN, human gene
*Spen, West Yorkshire, a List of United Kingdom locations: Sow-Stao#Sp, location in England
*River Spen, river in West Yorkshire, England, the United Kingdom
*SS Spen, SS ''Spen'', British steamship built in 190 ...
,
*
SUDS3,
*
SUV39H1,
*
Sp1 transcription factor
Transcription factor Sp1, also known as specificity protein 1* is a protein that in humans is encoded by the ''SP1'' gene.
Function
The protein encoded by this gene is a zinc finger transcription factor that binds to GC-rich motifs of many p ...
,
*
TOP2A
DNA topoisomerase IIα is a human enzyme encoded by the ''TOP2A'' gene.
Topoisomerase IIα relieves topological DNA stress during transcription, condenses chromosomes, and separates chromatids. It catalyzes the transient breaking and rejoining o ...
,
*
TOP2B,
and
*
Zinc finger and BTB domain-containing protein 16.
See also
*
Histone deacetylase
Histone deacetylases (, HDAC) are a class of enzymes that remove acetyl groups (O=C-CH3) from an ε-N-acetyl lysine amino acid on both histone and non-histone proteins. HDACs allow histones to wrap the DNA more tightly. This is important becaus ...
*
Histone deacetylase inhibitor
Histone deacetylase inhibitors (HDAC inhibitors, HDACi, HDIs) are chemical compounds that enzyme inhibitor, inhibit histone deacetylases. Since acetylation of histones, deacetylation of histones produces transcriptionally silenced heterochromatin ...
References
Further reading
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External links
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EC 3.5.1
Genes mutated in mice
Δ1