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Ectomycorrhizal extramatrical mycelium (also known as extraradical mycelium) is the collection of filamentous
fungal A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from ...
hyphae A hypha (; ) is a long, branching, filamentous structure of a fungus, oomycete, or actinobacterium. In most fungi, hyphae are the main mode of vegetative growth, and are collectively called a mycelium. Structure A hypha consists of one or ...
emanating from ectomycorrhizas. It may be composed of fine,
hydrophilic A hydrophile is a molecule or other molecular entity that is attracted to water molecules and tends to be dissolved by water.Liddell, H.G. & Scott, R. (1940). ''A Greek-English Lexicon'' Oxford: Clarendon Press. In contrast, hydrophobes are ...
hypha which branches frequently to explore and exploit the
soil matrix The soil matrix is the solid phase of soils, and comprise the solid particles that make up soils. Soil particles can be classified by their chemical composition (mineralogy) as well as their size. The particle size distribution of a soil, its textu ...
or may aggregate to form rhizomorphs; highly differentiated,
hydrophobic In chemistry, hydrophobicity is the physical property of a molecule that is seemingly repelled from a mass of water (known as a hydrophobe). In contrast, hydrophiles are attracted to water. Hydrophobic molecules tend to be nonpolar and, ...
, enduring, transport structures.


Characteristics


Overview

Apart from mycorrhizas, extramatrical mycelium is the primary vegetative body of ectomycorrhizal fungi. It is the location of
mineral In geology and mineralogy, a mineral or mineral species is, broadly speaking, a solid chemical compound with a fairly well-defined chemical composition and a specific crystal structure that occurs naturally in pure form.John P. Rafferty, ed. ...
acquisition,
enzyme Enzymes () are proteins that act as biological catalysts by accelerating chemical reactions. The molecules upon which enzymes may act are called substrate (chemistry), substrates, and the enzyme converts the substrates into different molecule ...
production, and a key means of colonizing new root tips. Extramatrical mycelium facilitates the movement of
carbon Carbon () is a chemical element with the symbol C and atomic number 6. It is nonmetallic and tetravalent—its atom making four electrons available to form covalent chemical bonds. It belongs to group 14 of the periodic table. Carbon makes ...
into the
rhizosphere The rhizosphere is the narrow region of soil or substrate that is directly influenced by root secretions and associated soil microorganisms known as the root microbiome. Soil pores in the rhizosphere can contain many bacteria and other microor ...
, moves carbon and nutrients between hosts and is an important food source for
invertebrates Invertebrates are a paraphyletic group of animals that neither possess nor develop a vertebral column (commonly known as a ''backbone'' or ''spine''), derived from the notochord. This is a grouping including all animals apart from the chordate ...
.


Exploration type

The mycelial growth pattern, extent of biomass accumulation, and the presence or absence of rhizomorphs are used to classify fungi by exploration type. Agerer first proposed the designation of exploration types in 2001, and the concept has since been widely employed in studies of ectomycorrhizal
ecology Ecology () is the study of the relationships between living organisms, including humans, and their physical environment. Ecology considers organisms at the individual, population, community, ecosystem, and biosphere level. Ecology overl ...
. Four exploration types are commonly recognized: Contact, Short-distance, Medium-distance and Long-distance. ''Contact'' exploration types possess a predominantly smooth mantle and lack rhizomorphs with ectomycorrhizas in close contact with the surrounding
substrate Substrate may refer to: Physical layers *Substrate (biology), the natural environment in which an organism lives, or the surface or medium on which an organism grows or is attached ** Substrate (locomotion), the surface over which an organism lo ...
. ''Short-distance'' exploration types also lack rhizomorphs but the mantle is surrounded by frequent projections of hyphae, which emanate a short distance into the surrounding substrate. Most ectomycorrhizal
ascomycetes Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The defi ...
are included in this group. ''Medium-distance'' exploration types are further divided into three subtypes defined by the growth range and differentiation of its rhizomorphs. ''Medium-distance Fringe'' form interconnected hyphal networks with rhizomorphs that divide and fuse repeatedly. ''Medium-distance Mat'' types form dense hyphal mats which aggregate into a homogeneous mass. Finally, the ''Medium-distance Smooth'' sub-type has rhizomorphs with smooth mantles and margins. ''Long-distance'' exploration types are highly differentiated, forming rhizomorphs that contain hollow vessel-like transport tubes. Long distance types are associated with increased levels of organic nitrogen uptake compared to other exploration types and are thought to be less competitive in disturbed systems in contrast to short distance types which are able to regenerate more efficiently after a disturbance event. Exploration type is primarily consistent within a given lineage. However, some fungal genera which contain a large number of
species In biology, a species is the basic unit of Taxonomy (biology), classification and a taxonomic rank of an organism, as well as a unit of biodiversity. A species is often defined as the largest group of organisms in which any two individuals of ...
have a great diversity of extramatrical hyphal morphology and are known to contain more than one exploration type. Because of this, extrapolating exploration type to species known only by lineage is difficult. Often, fungi fail to fit into a defined exploration type, falling instead along a gradient. Exploration type also fails to take into account other aspects of hyphal morphology, such as the extent to which hyphae cross into deeper
soil horizons A soil horizon is a layer parallel to the soil surface whose physical, chemical and biological characteristics differ from the layers above and beneath. Horizons are defined in many cases by obvious physical features, mainly colour and texture. ...
. Field studies have shown that extramatrical mycelium is more likely to proliferate in mineral soils than in
organic material Organic matter, organic material, or natural organic matter refers to the large source of carbon-based compounds found within natural and engineered, terrestrial, and aquatic environments. It is matter composed of organic compounds that have c ...
, and may be particularly absent in fresh
leaf litter Plant litter (also leaf litter, tree litter, soil litter, litterfall or duff) is dead plant material (such as leaves, bark, needles, twigs, and cladodes) that have fallen to the ground. This detritus or dead organic material and its constituent ...
. However, the presence of different ectomycorrhizal groups in different
soil horizons A soil horizon is a layer parallel to the soil surface whose physical, chemical and biological characteristics differ from the layers above and beneath. Horizons are defined in many cases by obvious physical features, mainly colour and texture. ...
suggest that different groups have evolved specialized niche separation, possibly attributable to exploration type.


Ecological implications


Community assembly

Because ectomycorrhizas are small and possess a limited contact area with the surrounding soil, the presence of extramatrical hyphae significantly increases the
surface area The surface area of a solid object is a measure of the total area that the surface of the object occupies. The mathematical definition of surface area in the presence of curved surfaces is considerably more involved than the definition of ...
in contact with the surrounding environment. Increased surface area means greater access to necessary nutrient sources. Additionally, the presence of rhizomorphs or mycelial cords, can act comparably to
xylem Xylem is one of the two types of transport tissue in vascular plants, the other being phloem. The basic function of xylem is to transport water from roots to stems and leaves, but it also transports nutrients. The word ''xylem'' is derived fr ...
tissue in plants, where hollow tubes of vessel hyphae shuttle water and
solubilized Micellar solubilization (solubilization) is the process of incorporating the solubilizate (the component that undergoes solublization) into or onto micelles. Solublization may occur in a system consisting of a solvent, an association colloid (a ...
nutrients over long distances. The abundance and spatial distribution of host root tips in the
rhizosphere The rhizosphere is the narrow region of soil or substrate that is directly influenced by root secretions and associated soil microorganisms known as the root microbiome. Soil pores in the rhizosphere can contain many bacteria and other microor ...
is an important factor mediating ectomycorrhizal community assembly. Root density may select for the exploration types best suited for a given root spacing. In
Pine A pine is any conifer tree or shrub in the genus ''Pinus'' () of the family (biology), family Pinaceae. ''Pinus'' is the sole genus in the subfamily Pinoideae. The World Flora Online created by the Royal Botanic Gardens, Kew and Missouri Botanic ...
systems, Fungi that display short-distance exploration types are less able to colonize new roots spaced far from the mycorrhiza, and long-distance types dominate areas of low root density. Conversely, short-distance exploration types tend to dominate areas of high root density where decreased carbon expenditure makes them more competitive than long-distance species. The growth of extramatrical mycelium has a direct effect on the mutualistic nutrient trading between ectomycorrhizal fungi and their hosts. Increased hyphal occupation of the soil allows the fungus to take greater advantage of water and nutrients otherwise inaccessible to plant roots and to more efficiently transport these resources back to the plant. Conversely, the increased costs in carbon allocation associated with supporting a fungal partner with an extensive mycelial system presents a number of questions related to the costs and benefits of ectomycorrhizal mutualism.


Carbon cycling

Although there is evidence that certain species of mycorrhizal fungi may obtain at least a portion of their carbon via
saprotrophic nutrition Saprotrophic nutrition or lysotrophic nutrition is a process of chemoheterotrophic extracellular digestion involved in the processing of decayed (dead or waste) organic matter. It occurs in saprotrophs, and is most often associated with fungi ( ...
, the bulk of mycorrhizal carbon acquisition happens by way of trading for host-derived photosynthetic products. Mycorrhizal systems represent a major
carbon sink A carbon sink is anything, natural or otherwise, that accumulates and stores some carbon-containing chemical compound for an indefinite period and thereby removes carbon dioxide () from the atmosphere. Globally, the two most important carbon si ...
. Laboratory studies predict that around 23% of plant-derived carbon is allocated to extrametrical mycelium, although an estimated 15-30% of this is lost to fungal respiration. Carbon allocation is distributed unequally to extramatrical mycelium depending on fungal taxa, nutrient availability, and the age of the associated mycorrhizas. Much of the carbon allocated to extramatrical mycelium accumulates as fungal
biomass Biomass is plant-based material used as a fuel for heat or electricity production. It can be in the form of wood, wood residues, energy crops, agricultural residues, and waste from industry, farms, and households. Some people use the terms biom ...
, making up an estimated one-third of the total
microbial A microorganism, or microbe,, ''mikros'', "small") and ''organism'' from the el, ὀργανισμός, ''organismós'', "organism"). It is usually written as a single word but is sometimes hyphenated (''micro-organism''), especially in olde ...
biomass and one-half of the total
dissolved organic carbon Dissolved organic carbon (DOC) is the fraction of organic carbon operationally defined as that which can pass through a filter with a pore size typically between 0.22 and 0.7 micrometers. The fraction remaining on the filter is called partic ...
in some forest soils. Carbon also supports the production of sporocarps and
sclerotia A sclerotium (; (), is a compact mass of hardened fungal mycelium containing food reserves. One role of sclerotia is to survive environmental extremes. In some higher fungi such as ergot, sclerotia become detached and remain dormant until favor ...
, with various taxa investing differentially in these structures rather than in the proliferation of extramatrical mycelium. Carbon acquisition also goes toward the production of fungal exudates. Extramatrical hyphae excrete a range of compounds into the soil matrix, accounting for as much as 40% of total carbon usage. These exudates are released primarily at the growing front, and are used in functions such as
mineralization Mineralization may refer to: * Mineralization (biology), when an inorganic substance precipitates in an organic matrix ** Biomineralization, a form of mineralization ** Mineralization of bone, an example of mineralization ** Mineralized tissues are ...
and
homeostasis In biology, homeostasis (British English, British also homoeostasis) Help:IPA/English, (/hɒmɪə(ʊ)ˈsteɪsɪs/) is the state of steady internal, physics, physical, and chemistry, chemical conditions maintained by organism, living systems. Thi ...
. Many researchers have attempted projections of the role that extramatrical mycelium may play in
carbon sequestration Carbon sequestration is the process of storing carbon in a carbon pool. Carbon dioxide () is naturally captured from the atmosphere through biological, chemical, and physical processes. These changes can be accelerated through changes in land ...
. Although estimates of the life span of individual ectomycorrhizas very considerably, turnover is generally considered on a scale of months. After death, the presence ectomycorrhizas on root tips, may increase the rate of root
decomposition Decomposition or rot is the process by which dead organic substances are broken down into simpler organic or inorganic matter such as carbon dioxide, water, simple sugars and mineral salts. The process is a part of the nutrient cycle and is ...
for some fungal taxa. Besides host plant death and mycorrhizal turnover, rates of carbon sequestration may also be affected by disturbances in the soil, which cause sections of the extramatrical mycelium to become severed from the host plant. Such disturbances, such as those caused by animal disruption, mycophagous invertebrates or habitat destruction, may have a notable impact on turnover rates. These variables make it difficult to estimate the turnover rates of mycorrhizal biomass in forest soils and the relative contribution of extramatrical mycelium to carbon sequestration.


Mycelial networks

The presence of long-distance extramatrical hyphae may affect forest health via the formation of common mycelial networks, in which hyphal connections form between plant hosts and can facilitate the transfer of carbon and nutrients between hosts. Mycelial networks may also be responsible for facilitating the transport of allelopathic chemicals from the supplying plant directly to the rhizosphere of other plants. Ectomycorrhizal fungi increase
primary production In ecology, primary production is the synthesis of organic compounds from atmospheric or aqueous carbon dioxide. It principally occurs through the process of photosynthesis, which uses light as its source of energy, but it also occurs through c ...
in host plants, with multi trophic effects. In this way, extramatrical mycelium is important to the maintenance of soil food webs, supplying a significant nutritive source to invertebrates and
microorganisms A microorganism, or microbe,, ''mikros'', "small") and ''organism'' from the el, ὀργανισμός, ''organismós'', "organism"). It is usually written as a single word but is sometimes hyphenated (''micro-organism''), especially in olde ...
.


Mineral access


Enzyme production

The enzymatic activities of ectomycorrhizal fungi are highly variable between species. These differences are correlated with exploration type (particularly the presence or absence of rhizomorphs) rather than lineage or host association- suggesting that similar morphologies of extraradical mycelium are an example of
convergent evolution Convergent evolution is the independent evolution of similar features in species of different periods or epochs in time. Convergent evolution creates analogous structures that have similar form or function but were not present in the last com ...
. Differences in enzymatic activity, and hence the ability to degrade
organic compounds In chemistry, organic compounds are generally any chemical compounds that contain carbon-hydrogen or carbon-carbon bonds. Due to carbon's ability to catenate (form chains with other carbon atoms), millions of organic compounds are known. The ...
dictate fungal nutrient access, with wide-ranging ecological implications.


Phosphorus

Because diverse ectomycorrhizal fungal taxa differ greatly in their metabolic activity they also often differ in their capacity to trade nutrients with their hosts. Phosphorus acquisition by mycorrhizal fungi, and the subsequent transfer to plant hosts, is thought to be one of the main functions of ectomycorrhizal symbiosis. Extramatrical mycelium is the site of collection for phosphorus within the soil system. This relationship is so strong that starving host plants of phosphorus is known to increase the growth of extramatrical mycelium tenfold.


Nitrogen

Recently, Isotopic studies have been used to investigate relative trading between ectomycorrhizal fungi and plant hosts and to assess the relative importance of exploration type on nutrient trading ability. 15N values are elevated in ectomycorrhizal Fungi and depleted in fungal hosts, as a result of nutrient trading. Fungal species with exploration types producing greater amounts of extraradical mycelium are known to accumulate greater amounts 15N in both root tips and fruit bodies, a phenomenon partially attributed to higher levels of N cycling within these species.


Assessment methods

Determining the
longevity The word " longevity" is sometimes used as a synonym for "life expectancy" in demography. However, the term ''longevity'' is sometimes meant to refer only to especially long-lived members of a population, whereas ''life expectancy'' is always d ...
of extramatrical mycelium is difficult, and estimates range from just a few months to several years. Turnover rates are assessed in a variety of ways including direct observation and 14 C dating. Such estimates are an important variable in calculating the contribution that ectomycorrhizal fungi have to
carbon sequestration Carbon sequestration is the process of storing carbon in a carbon pool. Carbon dioxide () is naturally captured from the atmosphere through biological, chemical, and physical processes. These changes can be accelerated through changes in land ...
. In order to differentiate ectomycorrhizal mycelium from the mycelium of saprotrophic fungi, biomass estimates are often done by
ergosterol Ergosterol (ergosta-5,7,22-trien-3β-ol) is a sterol found in cell membranes of fungi and protozoa, serving many of the same functions that cholesterol serves in animal cells. Because many fungi and protozoa cannot survive without ergosterol, the ...
or phospholipid fatty acid analysis, or by using sand-filled bags, which are likely to be avoided by saprotrophic fungi because they lack
organic matter Organic matter, organic material, or natural organic matter refers to the large source of carbon-based compounds found within natural and engineered, terrestrial, and aquatic environments. It is matter composed of organic compounds that have c ...
. Detailed morphological characterization of exploration type has been defined for over 550 different ectomycorrhizal species and are compiled in www. deemy. de. Due to the difficulty in classifying exploration types of intermediate forms, other metrics have been proposed to qualify and quantify the growth of extramatrical mycelium, including Specific Actual/Potential Mycelium Space Occupation and Specific Extramatrical Mycelial Length which attempt to account for the contributions of mycelial
density Density (volumetric mass density or specific mass) is the substance's mass per unit of volume. The symbol most often used for density is ''ρ'' (the lower case Greek letter rho), although the Latin letter ''D'' can also be used. Mathematicall ...
,
surface area The surface area of a solid object is a measure of the total area that the surface of the object occupies. The mathematical definition of surface area in the presence of curved surfaces is considerably more involved than the definition of ...
and total
biomass Biomass is plant-based material used as a fuel for heat or electricity production. It can be in the form of wood, wood residues, energy crops, agricultural residues, and waste from industry, farms, and households. Some people use the terms biom ...
.


References

{{Reflist Fungal morphology and anatomy Fungus ecology Mycology