Dystrobrevin
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Dystrobrevin is a
protein Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residue (biochemistry), residues. Proteins perform a vast array of functions within organisms, including Enzyme catalysis, catalysing metab ...
that binds to
dystrophin Dystrophin is a rod-shaped cytoplasmic protein, and a vital part of a protein complex that connects the cytoskeleton of a muscle fiber to the surrounding extracellular matrix through the cell membrane. This complex is variously known as the costa ...
in the
costamere The costamere is a structural-functional component of striated muscle cells which connects the sarcomere of the muscle to the cell membrane (i.e. the sarcolemma).20: 2327-2331 Costameres are sub-sarcolemmal protein assemblies circumferentially ...
of skeletal
muscle cell A muscle cell, also known as a myocyte, is a mature contractile Cell (biology), cell in the muscle of an animal. In humans and other vertebrates there are three types: skeletal muscle, skeletal, smooth muscle, smooth, and Cardiac muscle, cardiac ...
s. In humans, there are at least two
isoforms A protein isoform, or "protein variant", is a member of a set of highly similar proteins that originate from a single gene and are the result of genetic differences. While many perform the same or similar biological roles, some isoforms have uniqu ...
of dystrobrevin, dystrobrevin alpha and dystrobrevin beta. Dystrobrevins are members of dystrophin-related protein family which are thought to play an important role in intracellular
signal transduction Signal transduction is the process by which a chemical or physical signal is transmitted through a cell as a biochemical cascade, series of molecular events. Proteins responsible for detecting stimuli are generally termed receptor (biology), rece ...
and provide a membrane scaffold in muscle. Defects in dystrobrevins and their associated proteins cause a range of
neuromuscular disease A neuromuscular disease is any disease affecting the peripheral nervous system (PNS), the neuromuscular junctions, or skeletal muscles, all of which are components of the motor unit. Damage to any of these structures can cause muscle atrophy and we ...
s such as
muscular dystrophies Muscular dystrophies (MD) are a genetically and clinically heterogeneous group of rare neuromuscular diseases that cause progressive weakness and breakdown of skeletal muscles over time. The disorders differ as to which muscles are primarily aff ...
. Dystrobrevin was first identified by isolating from the electric organ of the electric ray '' Torpedo californica.'' It is a
phosphoprotein A phosphoprotein is a protein that is posttranslationally modified by the attachment of either a single phosphate group, or a complex molecule such as 5'-phospho-DNA, through a phosphate group. The target amino acid is most often serine, threonin ...
, which weights 87 kDa, associated with the postsynaptic membrane at the cytoplasmic face. Dystrobrevin proteins have been said to participates in the formation and stability of synapses because it copurifies with acetylcholine receptors from ''Torpedo'' electric organ membranes. In 1997, an experiment was done using the yeast two-hybrid model to identify protein-protein interaction between dystrobrevin and
dystrophin-associated protein complex The dystrophin-associated protein complex, also known as the dystrophin-associated glycoprotein complex is a multiprotein complex that includes dystrophin and the dystrophin-associated proteins. It is one of the two protein complexes that make up ...
(DPC). The evidence suggested that dystrobrevin works as a motor protein receptor that might play an important role in the transport of components of the dystrophin-associated protein complex to specific intracellular sites. The DPC is expressed in both muscle and non-muscle tissues. It works as a mechanical component of cells and a dynamic multifunctional structure that can serve as a scaffold for signaling molecules. The dystrophin-associated proteins can be divided into three groups depending on their cellular localization: extracellular,
transmembrane A transmembrane protein is a type of integral membrane protein that spans the entirety of the cell membrane. Many transmembrane proteins function as gateways to permit the transport of specific substances across the membrane. They frequently u ...
, and
cytoplasm The cytoplasm describes all the material within a eukaryotic or prokaryotic cell, enclosed by the cell membrane, including the organelles and excluding the nucleus in eukaryotic cells. The material inside the nucleus of a eukaryotic cell a ...
ic. Dystrobrevin protein is a part of the cytoplasmic complex and an intracellular protein that binds directly to dystrophin. In invertebrates, dystrobrevin is present as a single protein, while in vertebrates, there are two isoforms, a-dystrobrevin (DTNA) and β-dystrobrevin (DTNB). Each dystrobrevin isoform has a unique structure with carboxyl termini and
sequence homology Sequence homology is the homology (biology), biological homology between DNA sequence, DNA, RNA sequence, RNA, or Protein primary structure, protein sequences, defined in terms of shared ancestry in the evolutionary history of life. Two segments ...
with the cysteine-rich carboxyl-terminal region of dystrophin. This region of similarity can be divided into several functional domains such as two coiled-coil regions, two
EF hand The EF hand is a helix–loop–helix structural domain or ''motif'' found in a large family of calcium-binding proteins. The EF-hand motif contains a helix–loop–helix topology, much like the spread thumb and forefinger of the human hand, in ...
s or a ZZ-type zinc finger.


Evolutionary History

A phylogenic tree for the dystrophin protein family has been proposed based on the analysis of known dystrobrevin and dystrophin sequences that were extracted from human and fruit fly proteins. The
phylogeny A phylogenetic tree or phylogeny is a graphical representation which shows the evolutionary history between a set of species or Taxon, taxa during a specific time.Felsenstein J. (2004). ''Inferring Phylogenies'' Sinauer Associates: Sunderland, M ...
postulated a non-metazoan ancestor that had a single dystrophin/dystrobrevin protein, which probably functioned as a
homodimer In biochemistry, a protein dimer is a macromolecular complex or protein multimer, multimer formed by two protein monomers, or single proteins, which are usually Non-covalent interaction, non-covalently bound. Many macromolecules, such as proteins ...
. At some point before the last common ancestor of metazoans, a duplication lead to a separation of dystrophin and dystrobrevin genes, their protein products forming a heterodimer of more specialized components. In vertebrates, two other duplications occurred. The first gave rise to DRP2, a common ancestor of dystrophin and utrophin, and to α- and β-dystrobrevin. The second resulted in the separate dystrophin and utrophin genes. In addition, sequence alignments of dystrophin family protein strongly support the concept that two distinct subfamilies exist, one consisted of dystrophin, utrophin, and DRP2 and the other consisted of α- and β-dystrobrevin.


Classification

Dystrobrevins are the product of two distinct genes coding for two highly homologous proteins, dystrobrevin α, and dystrobrevin β. Several different transcripts are derived from each gene by
alternative splicing Alternative splicing, alternative RNA splicing, or differential splicing, is an alternative RNA splicing, splicing process during gene expression that allows a single gene to produce different splice variants. For example, some exons of a gene ma ...
or initiation sites, generating a large family of dystrobrevin isoforms.


Dystrobrevin alpha

The α-dystrobrevin structure is homologous to the cysteine-rich carboxy-terminal domain of dystrophin. This protein is expressed predominantly in skeletal muscle, heart, lung, and central nervous system. It is thought to be involved in
synaptic transmission Neurotransmission (Latin: ''transmissio'' "passage, crossing" from ''transmittere'' "send, let through") is the process by which signaling molecules called neurotransmitters are released by the axon terminal of a neuron (the presynaptic neuron) ...
at the
neuromuscular junction A neuromuscular junction (or myoneural junction) is a chemical synapse between a motor neuron and a muscle fiber. It allows the motor neuron to transmit a signal to the muscle fiber, causing muscle contraction. Muscles require innervation to ...
and in
intracellular signaling In biology, cell signaling (cell signalling in British English) is the Biological process, process by which a Cell (biology), cell interacts with itself, other cells, and the environment. Cell signaling is a fundamental property of all Cell (biol ...
.


Dystrobrevin beta

The β-dystrobrevin, is only found in non-muscle tissues, predominantly expressed in kidney and brain, and forms complexes with dystrophin-associated proteins and syntrophin in liver and brain. In the brain, β-dystrobrevin associates with dystrophin isoforms in the cortex,
hippocampus The hippocampus (: hippocampi; via Latin from Ancient Greek, Greek , 'seahorse'), also hippocampus proper, is a major component of the brain of humans and many other vertebrates. In the human brain the hippocampus, the dentate gyrus, and the ...
, and Purkinje neurons.


Gene and transcripts

The human α-dystrobrevin gene is localized to
chromosome A chromosome is a package of DNA containing part or all of the genetic material of an organism. In most chromosomes, the very long thin DNA fibers are coated with nucleosome-forming packaging proteins; in eukaryotic cells, the most import ...
18 and consists of 23 coding
exon An exon is any part of a gene that will form a part of the final mature RNA produced by that gene after introns have been removed by RNA splicing. The term ''exon'' refers to both the DNA sequence within a gene and to the corresponding sequence ...
s. α-Dystrobrevin is known to be subject to extensive splicing regulation. The alternative usage of three exons 21, 17B, and 11B generates RNA molecules with different lengths encoding three major α-dystrobrevin products in human skeletal muscle: α-dystrobrevin 1, α-dystrobrevin 2, and α-dystrobrevin 3. Due to
alternative splicing Alternative splicing, alternative RNA splicing, or differential splicing, is an alternative RNA splicing, splicing process during gene expression that allows a single gene to produce different splice variants. For example, some exons of a gene ma ...
within the coding regions, supplemental diversity is observed referred to as variable regions 1, 2, and 3 Firstly, variable region 1 (vr1) consists of a short exon containing three
amino acid Amino acids are organic compounds that contain both amino and carboxylic acid functional groups. Although over 500 amino acids exist in nature, by far the most important are the 22 α-amino acids incorporated into proteins. Only these 22 a ...
s. In mice, the transcripts including this exon are primarily restricted to the brain but are present in the brain, heart, and skeletal muscle in humans. Secondly, variable region 2 (vr2) consists of exons 17A and 17B which encodes the unique C-terminal tail of α-dystrobrevin 2. Lastly, variable region 3 (vr3) consists of exons 11A, 11B, and 12, and exon 11B encodes the unique C-terminal tail of α-dystrobrevin 3. In mouse skeletal muscle, the splicing of vr2 and vr3 has been reported to be developmentally controlled. The human β-dystrobrevin gene was localized to the short arm of chromosome 2. Pair-wise comparison between α- and β-dystrobrevin sequences revealed that the two dystrobrevins have 76% identity.


Structure of protein

α- and β-Dystrobrevin proteins structure consisted of four major domains, a ZZ -type
zinc finger A zinc finger is a small protein structural motif that is characterized by the coordination of one or more zinc ions (Zn2+) which stabilizes the fold. The term ''zinc finger'' was originally coined to describe the finger-like appearance of a ...
domain, two
EF-hand The EF hand is a helix–loop–helix structural domain or ''motif'' found in a large family of calcium-binding proteins. The EF-hand motif contains a helix–loop–helix topology, much like the spread thumb and forefinger of the human hand, in ...
regions, an α-helical
coiled-coil A coiled coil is a structural motif in proteins in which two to seven alpha-helices are coiled together like the strands of a rope. ( Dimers and trimers are the most common types.) They have been found in roughly 5-10% of proteins and have a v ...
domain containing a dystrophin
binding site In biochemistry and molecular biology, a binding site is a region on a macromolecule such as a protein that binds to another molecule with specificity. The binding partner of the macromolecule is often referred to as a ligand. Ligands may includ ...
, and a
tyrosine kinase A tyrosine kinase is an enzyme that can transfer a phosphate group from ATP to the tyrosine residues of specific proteins inside a cell. It functions as an "on" or "off" switch in many cellular functions. Tyrosine kinases belong to a larger cla ...
substrate domain. α-Dystrobrevin 1, α-Dystrobrevin 2, and α-dystrobrevin 3 binds to the dystrophin-glycoprotein complex via the amino-terminus region. α-Dystrobrevin 1 and α-Dystrobrevin 2 bind dystrophin through a highly conserved coiled-coil domain. β-dystrobrevin is detected as a 61-kDa protein in the brain, kidney, liver, and lung. β-dystrobrevin can be distinguished from α-dystrobrevin 2 because it has lower relative mobility. Slight differences in the size of the β-dystrobrevin were observed in the brain compared with the kidney, liver, and lung.


Localization

α-Dystrobrevin 1 is localized in the
sarcolemma The sarcolemma (''sarco'' (from ''sarx'') from Greek; flesh, and ''lemma'' from Greek; sheath), also called the myolemma, is the cell membrane surrounding a skeletal muscle fibre or a cardiomyocyte. It consists of a lipid bilayer and a thin ...
and is abundant at the neuromuscular junction, and concentrated in the crest of the junctional folds. α-Dystrobrevin 2 is localized around the entire circumference of the sarcolemmal plasma membrane including the
neuromuscular junction A neuromuscular junction (or myoneural junction) is a chemical synapse between a motor neuron and a muscle fiber. It allows the motor neuron to transmit a signal to the muscle fiber, causing muscle contraction. Muscles require innervation to ...
. α-Dystrobrevin 2 primarily co-localizes with dystrophin at the neuromuscular junction, while α-Dystrobrevin 1 co-localizes with both
dystrophin Dystrophin is a rod-shaped cytoplasmic protein, and a vital part of a protein complex that connects the cytoskeleton of a muscle fiber to the surrounding extracellular matrix through the cell membrane. This complex is variously known as the costa ...
and utrophin. α-Dystrobrevin 3 has been thought to be located on the cytoplasmic site.   The location and expression pattern of β-dystrobrevin was observed by using
Northern blot The northern blot, or RNA blot,Gilbert, S. F. (2000) Developmental Biology, 6th Ed. Sunderland MA, Sinauer Associates. is a technique used in molecular biology research to study gene expression by detection of RNA (or isolated mRNA) in a sample.Ke ...
s of mouse RNAs. A single 2.5-kb transcript was detected predominantly in the brain and kidney and to a lesser extent in liver and lung. No β-dystrobrevin transcripts were detected in skeletal and
cardiac muscle Cardiac muscle (also called heart muscle or myocardium) is one of three types of vertebrate muscle tissues, the others being skeletal muscle and smooth muscle. It is an involuntary, striated muscle that constitutes the main tissue of the wall o ...
even after long exposures. This evidence suggested that the β-dystrobrevin transcript was weakly expressed or absent in muscle.


Function

The fundamental role of the dystrobrevin protein family remains unclear. Much of what we do know has been observation from biochemical studies of associated proteins and the phenotypic consequences of their loss. α-Dystrobrevin proteins are suggested to involve in the structural integrity of muscle cells by interacting with cytoskeletal binding proteins and signal transduction by interacting with syntrophin. Firstly, α-Dystrobrevin is a component of the dystrophin-
glycoprotein Glycoproteins are proteins which contain oligosaccharide (sugar) chains covalently attached to amino acid side-chains. The carbohydrate is attached to the protein in a cotranslational or posttranslational modification. This process is known a ...
complex, which is extremely useful for maintenance of the skeletal cell integrity. α-dystrobrevin associated with dystrophin at its coil-coil region and with a sarcoglycan-protein complex at the amino-terminal. It has been proposed to function as a structural scaffold linking the dystrophin-glycoprotein complex to the intracellular cytoskeleton. Based on the yeast two-hybrid system and co-immunoprecipitation analysis, three other proteins were identified as additional to α-dystrobrevin-binding proteins: β-synemin,
syncoilin Discovery Syncoilin is a muscle-specific atypical Intermediate filament#Type III, type III intermediate filament protein encoded in the human by the gene ''SYNC''. It was first isolated as a binding partner to DTNA, α-dystrobrevin, as determine ...
, and dysbindin. Syncoilin and β-synemin are both
intermediate filament Intermediate filaments (IFs) are cytoskeleton, cytoskeletal structural components found in the cells of vertebrates, and many invertebrates. Homologues of the IF protein have been noted in an invertebrate, the cephalochordate ''Branchiostoma' ...
proteins. The intermediate filaments are responsible for forming the structure of the cell cytoskeleton and providing mechanical stability to the cells. Syncoilin co-localizes with α-dystrobrevin at both the neuromuscular junction and sarcolemma while β-Synemin co-localizes with α-dystrobrevin only at the neuromuscular junction. The interaction of α-dystrobrevin and β-synemin provides an additional connection between the intermediate filament system and the dytsrophin-glycoprotein complex. Dysbindin is located at the sarcolemma, and its expression in skeletal muscle is relatively low. Secondly, α-Dystrobrevins participate in intracellular signaling since they bind directly with syntrophin, which is a modular adaptor protein thought to be involved in signal transduction. In skeletal muscle, syntrophins have four main isoforms: α-, β1-, β2-, and γ2-syntrophin. β-dystrobrevin has been thought to play a structural role in the composition of the dystrophin-associated protein complex in the brain which differs from that in muscle. β-dystrobrevin coimmunoprecipitates with the dystrophin isoforms Dp71 and Dp140 in the brain. Dp140 is concentrated in the brain microvasculature while the Dp71 transcript is found throughout the brain but is particularly abundant in the
dentate gyrus The dentate gyrus (DG) is one of the subfields of the hippocampus, in the hippocampal formation. The hippocampal formation is located in the temporal lobe of the brain, and includes the hippocampus (including CA1 to CA4) subfields, and other su ...
of the
temporal lobe The temporal lobe is one of the four major lobes of the cerebral cortex in the brain of mammals. The temporal lobe is located beneath the lateral fissure on both cerebral hemispheres of the mammalian brain. The temporal lobe is involved in pr ...
, and the
olfactory bulb The olfactory bulb (Latin: ''bulbus olfactorius'') is a neural structure of the vertebrate forebrain involved in olfaction, the sense of smell. It sends olfactory information to be further processed in the amygdala, the orbitofrontal cortex (OF ...
.


Dystrobrevins and muscle diseases

The consequences of null mutation are known for humans and
rodent Rodents (from Latin , 'to gnaw') are mammals of the Order (biology), order Rodentia ( ), which are characterized by a single pair of continuously growing incisors in each of the upper and Mandible, lower jaws. About 40% of all mammal specie ...
s in the case of
dystrophin Dystrophin is a rod-shaped cytoplasmic protein, and a vital part of a protein complex that connects the cytoskeleton of a muscle fiber to the surrounding extracellular matrix through the cell membrane. This complex is variously known as the costa ...
, utrophin, and α-dystrobrevin, and for nematode in the case of dystrophin and dystrobrevin. In human, the
Duchenne muscular dystrophy Duchenne muscular dystrophy (DMD) is a severe type of muscular dystrophy predominantly affecting boys. The onset of muscle weakness typically begins around age four, with rapid progression. Initially, muscle loss occurs in the thighs and pe ...
is a well-known muscle disease which highlights the importance of dystrophin/ dystrobrevin protein to function of muscle tissue. Duchenne muscular dystrophy (DMD) is a fatal progressive disease of both cardiac and skeletal muscle resulting from the
mutation In biology, a mutation is an alteration in the nucleic acid sequence of the genome of an organism, virus, or extrachromosomal DNA. Viral genomes contain either DNA or RNA. Mutations result from errors during DNA or viral replication, ...
s in the DMD gene and loss of the protein dystrophin. The lack of dystrophin that causes Duchenne muscular dystrophy results in secondary loss of other dystrophin-complex components from the membrane. The loss of protein dystrophin ultimately leads to a lethal syndrome of skeletal and cardiac
myopathy In medicine, myopathy is a disease of the muscle in which the muscle fibers do not function properly. ''Myopathy'' means muscle disease ( Greek : myo- ''muscle'' + patheia '' -pathy'' : ''suffering''). This meaning implies that the primary defec ...
, stationary night blindness, mental retardation, a cardiac-conduction defect, and a subtle smooth-muscle defect. Some of these traits are also found in a subset of the limb-girdle muscular dystrophies that result from sarcoglycan defects. α-Dystrobrevin proteins were found absent in a heart that is highly susceptible to injury during cardiac stress. The dystrobrevin loss resulted from a weakening of dystrophin's interaction with the membrane-bound dystrophin-glycoprotein complex, and lead to a significant loss of membrane integrity.


References


External links

* {{Muscle tissue