Center For Applied Internet Data Analysis
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The San Diego Supercomputer Center (SDSC) is an organized research unit of the
University of California, San Diego The University of California, San Diego (UC San Diego in communications material, formerly and colloquially UCSD) is a public university, public Land-grant university, land-grant research university in San Diego, California, United States. Es ...
. Founded in 1985, it was one of the five original NSF supercomputing centers. Its research pursuits are
high performance computing High-performance computing (HPC) is the use of supercomputers and computer clusters to solve advanced computation problems. Overview HPC integrates systems administration (including network and security knowledge) and parallel programming into ...
,
grid computing Grid computing is the use of widely distributed computer resources to reach a common goal. A computing grid can be thought of as a distributed system with non-interactive workloads that involve many files. Grid computing is distinguished fro ...
,
computational biology Computational biology refers to the use of techniques in computer science, data analysis, mathematical modeling and Computer simulation, computational simulations to understand biological systems and relationships. An intersection of computer sci ...
,
geoinformatics Geoinformatics is a scientific field primarily within the domains of Computer Science and technical geography. It focuses on the programming of applications, spatial data structures, and the analysis of objects and space-time phenomena relate ...
,
computational physics Computational physics is the study and implementation of numerical analysis to solve problems in physics. Historically, computational physics was the first application of modern computers in science, and is now a subset of computational science ...
,
computational chemistry Computational chemistry is a branch of chemistry that uses computer simulations to assist in solving chemical problems. It uses methods of theoretical chemistry incorporated into computer programs to calculate the structures and properties of mol ...
,
data management Data management comprises all disciplines related to handling data as a valuable resource, it is the practice of managing an organization's data so it can be analyzed for decision making. Concept The concept of data management emerged alongsi ...
,
scientific visualization Scientific visualization ( also spelled scientific visualisation) is an interdisciplinary branch of science concerned with the visualization of scientific phenomena. Michael Friendly (2008)"Milestones in the history of thematic cartography, st ...
,
cyberinfrastructure United States federal government agencies use the term cyberinfrastructure to describe research environments that support advanced data acquisition, data storage, data management, data integration, data mining, data visualization and other computin ...
, and
computer network A computer network is a collection of communicating computers and other devices, such as printers and smart phones. In order to communicate, the computers and devices must be connected by wired media like copper cables, optical fibers, or b ...
ing. SDSC computational biosciences contributions and earth science and genomics computational approaches are internationally recognized. The current SDSC director is Frank Würthwein, Ph.D., UC San Diego physics professor and a founding faculty member of the Halıcıoğlu Data Science Institute of UC San Diego. Würthwein assumed the role in July 2021. He succeeded Michael L. Norman, also a physics professor at UC San Diego, and who was the SDSC director since September 2010.


Divisions and projects

SDSC roles include creating and maintaining the
Protein Data Bank The Protein Data Bank (PDB) is a database for the three-dimensional structural data of large biological molecules such as proteins and nucleic acids, which is overseen by the Worldwide Protein Data Bank (wwPDB). This structural data is obtained a ...
, the George E. Brown Jr. Network for Earthquake Engineering Simulation Cyberinfrastructure Center (NEESit), cyberinfrastructure for the geosciences (GEON), and the Tree of Life Project (TOL) are especially well known. SDSC is one of the four original
TeraGrid TeraGrid was an e-Science grid computing infrastructure combining resources at eleven partner sites. The project started in 2001 and operated from 2004 through 2011. The TeraGrid integrated high-performance computers, data resources and tools, an ...
project sites with
National Center for Supercomputing Applications The National Center for Supercomputing Applications (NCSA) is a unit of the University of Illinois Urbana-Champaign, and provides high-performance computing resources to researchers in the United States. NCSA is currently led by Professor Bill ...
(NCSA),
Argonne National Laboratory Argonne National Laboratory is a Federally funded research and development centers, federally funded research and development center in Lemont, Illinois, Lemont, Illinois, United States. Founded in 1946, the laboratory is owned by the United Sta ...
, and the Center for Advanced Computing Research (CACR). SDSC is a data management software development pioneer, having developed the
Rocks In geology, rock (or stone) is any naturally occurring solid mass or aggregate of minerals or mineraloid matter. It is categorized by the minerals included, its chemical composition, and the way in which it is formed. Rocks form the Earth's ...
cluster computing environment and
storage resource broker Storage Resource Broker (SRB) is data grid management computer software used in computational science research projects. SRB is a logical distributed file system based on a client-server architecture which presents users with a single global log ...
(SRB). SDSC is home to the Performance Modeling and Characterization (PMaC) laboratory, whose mission is to bring scientific rigor to the prediction and understanding of factors affecting the performance of current and projected High Performance Computing (HPC) platforms. PMaC is funded by the Department of Energy (SciDac PERC research grant), the Department of Defense (Navy DSRC PET program), DARPA, and the National Science Foundation. Allan E. Snavely founded the PMaC laboratory in 2001. In 2009 a combined team from SDSC and Lawrence Berkeley National Labs led by Allan Snavely won the prestigious Data Challenge competition held in Portland Oregon, at SC09, the annual premier conference in High Performance Computing, Networking, Storage, and Analysis for their design of a new kind of supercomputer that makes extensive use of flash memory and nicknamed "Dash". Dash was a prototype for a much larger system nicknamed "Gordon" that the team deployed at SDSC in 2011 with more than 256 TB of flash memory. "Gordon" became operational in 2011, with a formal launch on December 5, 2011. The and the Computational and Applied Statistics Laboratory (CASL) is also located at the SDSC.


CAIDA

SDSC is also home to the Center for Applied Internet Data Analysis (CAIDA). CAIDA is a collaboration of government, research, and commercial entities working together to improve the Internet. It features an academic network test infrastructure called the ''Archipelago Measurement Infrastructure'' (Ark), similar to networks such as
PlanetLab PlanetLab was a group of computers available as a testbed for computer networking and distributed systems research. It was established in 2002 by Prof. Larry L. Peterson and Prof. David Culler, and by 2005 it had been deployed at 252 sites in ...
and
RIPE Atlas RIPE Atlas is a global, open, distributed Internet measurement platform, consisting of thousands of measurement devices that measure Internet connectivity in real time. History RIPE Atlas was established in 2010 by the RIPE Network Coordination C ...
.


See also

*
National Digital Library Program The National Digital Library Program (NDLP) is a project by the United States Library of Congress to assemble a digital library of reproductions of primary source materials to support the study of the history and culture of the United States. ...
(NDLP) *
National Digital Information Infrastructure and Preservation Program The National Digital Information Infrastructure and Preservation Program (NDIIPP) of the United States was an archival program led by the Library of Congress to preserve and provide access to digital resources. The program convened several workin ...
(NDIIPP)


References


External links


SDSC



PMac

Allan E. Snavely

NEESit

Chronopolis
{{authority control University of California, San Diego Supercomputer sites E-Science Cyberinfrastructure La Jolla, San Diego 1985 establishments in California