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A calixarene is a
macrocycle Macrocycles are often described as molecules and ions containing a ring of twelve or more atoms. Classical examples include the crown ethers, calixarenes, porphyrins, and cyclodextrins. Macrocycles describe a large, mature area of chemistry. ...
or cyclic
oligomer In chemistry and biochemistry, an oligomer () is a molecule that consists of a few repeating units which could be derived, actually or conceptually, from smaller molecules, monomers.Quote: ''Oligomer molecule: A molecule of intermediate relativ ...
based on a methylene-linked
phenol Phenol (also known as carbolic acid, phenolic acid, or benzenol) is an aromatic organic compound with the molecular formula . It is a white crystalline solid that is volatile and can catch fire. The molecule consists of a phenyl group () ...
s. With
hydrophobic In chemistry, hydrophobicity is the chemical property of a molecule (called a hydrophobe) that is seemingly repelled from a mass of water. In contrast, hydrophiles are attracted to water. Hydrophobic molecules tend to be nonpolar and, thu ...
cavities that can hold smaller molecules or ions, calixarenes belong to the class of cavitands known in
host–guest chemistry In supramolecular chemistry, host–guest chemistry describes inclusion compound, complexes that are composed of two or more molecules or ions that are held together in unique structural relationships by forces other than those of full covalent bo ...
.


Nomenclature

Calixarene
nomenclature Nomenclature (, ) is a system of names or terms, or the rules for forming these terms in a particular field of arts or sciences. (The theoretical field studying nomenclature is sometimes referred to as ''onymology'' or ''taxonymy'' ). The principl ...
is straightforward and involves counting the number of repeating units in the ring and including it in the name. A calix rene has 4 units in the ring and a calix rene has 6. A
substituent In organic chemistry, a substituent is one or a group of atoms that replaces (one or more) atoms, thereby becoming a moiety in the resultant (new) molecule. The suffix ''-yl'' is used when naming organic compounds that contain a single bond r ...
in the meso position Rb is added to the name with a prefix C- as in C-methylcalix rene The word calixarene is derived from the Greek calix or
chalice A chalice (from Latin 'cup', taken from the Ancient Greek () 'cup') is a drinking cup raised on a stem with a foot or base. Although it is a technical archaeological term, in modern parlance the word is now used almost exclusively for the ...
because this type of molecule resembles a vase (or cup) and from the word arene that refers to the aromatic building block.


Synthesis

Calixarenes are generally produced by condensation of two components: an electron-rich aromatic compound, classically a 4-substituted phenol, and an aldehyde, classically formaldehyde. *The scope for the aromatic component is broad diverse. The key attribute is susceptibility toward hydroxyalkylation. The related resorcinarenes and pyrogallolarenes are produced from
resorcinol Resorcinol (or resorcin) is a phenolic compound. It is an organic compound with the formula C6H4(OH)2. It is one of three isomeric benzenediols, the 1,3-isomer (or ''meta- (chemistry), meta''-isomer). Resorcinol crystallizes from benzene as co ...
and
pyrogallol Pyrogallol is an organic compound with the formula C6H3(OH)3. It is a water-soluble, white solid although samples are typically brownish because of its sensitivity toward oxygen. It is one of three isomers of benzenetriols. Production and reac ...
, respectively. *The aldehyde most often used is
formaldehyde Formaldehyde ( , ) (systematic name methanal) is an organic compound with the chemical formula and structure , more precisely . The compound is a pungent, colourless gas that polymerises spontaneously into paraformaldehyde. It is stored as ...
, while larger aldehydes, like
acetaldehyde Acetaldehyde (IUPAC systematic name ethanal) is an organic compound, organic chemical compound with the chemical formula, formula , sometimes abbreviated as . It is a colorless liquid or gas, boiling near room temperature. It is one of the most ...
, are usually required in condensation reactions with resorcinol and pyrogallol to facilitate formation of the C4v symmetric vase conformation. Additionally, substituted aldehydes and some heterocycles (e.g.
furan Furan is a Heterocyclic compound, heterocyclic organic compound, consisting of a five-membered aromatic Ring (chemistry), ring with four carbon Atom, atoms and one oxygen atom. Chemical compounds containing such rings are also referred to as f ...
) may be used to impart additional functional groups onto the pendent groups of resorcinarenes and pyrogallolarenes. Calixarenes can be challenging to synthesize, producing instead complex mixtures of linear and cyclic oligomers. With finely tuned starting materials and reaction conditions, synthesis can also be surprisingly efficient. Calixarenes are sparingly soluble as parent compounds and have high melting points.


Structure

Calixarenes are characterised by a three-dimensional basket, cup or bucket shape. In calix renes the internal
volume Volume is a measure of regions in three-dimensional space. It is often quantified numerically using SI derived units (such as the cubic metre and litre) or by various imperial or US customary units (such as the gallon, quart, cubic inch) ...
is around 10 cubic angstroms. Calixarenes are characterised by a wide upper rim and a narrow lower rim and a central annulus. With phenol as a starting material the 4
hydroxyl In chemistry, a hydroxy or hydroxyl group is a functional group with the chemical formula and composed of one oxygen atom covalently bonded to one hydrogen atom. In organic chemistry, alcohols and carboxylic acids contain one or more hydroxy ...
groups are intrannular on the lower rim. In a resorcin rene 8 hydroxyl groups are placed extraannular on the upper ring. Calixarenes exist in different chemical conformations because rotation around the methylene bridge is not difficult. In calix rene 4 up–down conformations exist: cone (
point group In geometry, a point group is a group (mathematics), mathematical group of symmetry operations (isometry, isometries in a Euclidean space) that have a Fixed point (mathematics), fixed point in common. The Origin (mathematics), coordinate origin o ...
C2v,C4v), partial cone Cs, 1,2 alternate C2h and 1,3 alternate D2d. The 4 hydroxyl groups interact by
hydrogen bond In chemistry, a hydrogen bond (H-bond) is a specific type of molecular interaction that exhibits partial covalent character and cannot be described as a purely electrostatic force. It occurs when a hydrogen (H) atom, Covalent bond, covalently b ...
ing and stabilize the cone conformation. This conformation is in dynamic equilibrium with the other conformations. Conformations can be locked in place with proper substituents replacing the hydroxyl groups which increase the rotational barrier. Alternatively placing a bulky substituent on the upper rim also locks a conformation. The calixarene based on ''p''-''tert''-butyl phenol is also a cone. Calixarenes are structurally related to the pillararenes.


History

In 1872
Adolf von Baeyer Johann Friedrich Wilhelm Adolf von Baeyer (; 31 October 1835 – 20 August 1917) was a German chemist who synthesised indigo dye, indigo and developed a Von Baeyer nomenclature, nomenclature for cyclic compounds (that was subsequently extended a ...
mixed various aldehydes, including formaldehyde, with phenols in a strongly acidic solution. The resultant tars defied characterization; but represented the typical products of a phenol/formaldehyde polymerization.
Leo Baekeland Leo Hendrik Baekeland ( , ; November 14, 1863 – February 23, 1944) was a Belgian chemist. Educated in Belgium and Germany, he spent most of his career in the United States. He is best known for the inventions of Velox photographic paper ...
discovered that these tars could be cured into a brittle substance which he marketed as "
Bakelite Bakelite ( ), formally , is a thermosetting polymer, thermosetting phenol formaldehyde resin, formed from a condensation reaction of phenol with formaldehyde. The first plastic made from synthetic components, it was developed by Belgian chemist ...
". This polymer was the first commercial synthetic plastic. The success of Bakelite spurred scientific investigations into the chemistry of the phenol/formaldehyde reaction. One result was the discovery made in 1942 by Alois Zinke, that p-alkyl phenols and formaldehyde in a strongly basic solution yield mixtures containing cyclic tetramers. Concomitantly, Joseph Niederl and H. J. Vogel obtained similar cyclic tetramers from the acid-catalyzed reaction of resorcinol and aldehydes such as benzaldehyde. A number of years later, John Cornforth showed that the product from p-tert-butylphenol and formaldehyde is a mixture of the cyclic tetramer and another ambiguous cyclomer. His interest in these compounds was in the tuberculostatic properties of their oxyethylated derivatives. In the early 1970s C. David Gutsche recognized the calix shape of the cyclic tetramer and thought that it might furnish the structure for building an enzyme xenologue. He initiated a study that lasted for three decades. His attention to these compounds came from acquaintance with the Petrolite company's commercial demulsifiers, made by
ethoxylation In organic chemistry, ethoxylation is a chemical reaction in which ethylene oxide () adds to a substrate. It is the most widely practiced alkoxylation, which involves the addition of epoxides to substrates. In the usual application, alcoh ...
of the still ambiguous products from p-alkylphenols and formaldehyde. He introduced the name "calixarene": from "calix", the Greek name for a chalice, and "arene" for the presence of aryl groups in the cyclic array. He also determined the structures for the cyclic tetramer, hexamer, and octamer, along with procedures for obtaining these materials in good to excellent yields. He then established procedures for attaching functional groups to both the upper and lower rims and mapped the conformational states of these flexible molecules. Additionally, he proved that the cyclic tetramer can be frozen into a cone conformation, by the addition of measurably large substituents to the lower "rim" of the calix shape. Concomitant with Gutsche's work was that of the Hermann Kämmerer and Volker Böhmer. They developed methods for the stepwise synthesis of calixarenes. Chemists of University of Parma, Giovanni Andreetti, Rocco Ungaro and Andrea Pochini were the first to resolve X-ray crystallographic images of calixarenes. In the mid 1980s, other investigators joined the field of calixarene chemistry. It has become an important aspect of supramolecular chemistry and attracts the attention of hundreds of scientists around the world. The Niederl cyclic tetramers from resorcinol and aldehydes were studied in detail by Donald J. Cram, who called the derived compounds " cavitands" and " carcerands". An accurate and detailed history of the calixarenes along with extensive discussion of calixarene chemistry can be found in Gutsche's monograph.


Medical uses

Water soluble calixarenes, such as para-sulfontocalix rene, have not only been examined for drug delivery., but also for their potential as pharmaceutical drugs themselves, directly combating disease. Calix rene, for instance, has been shown to inhibit extracellular vesicle biogenesis of extracellular vesicles in
pancreatic cancer Pancreatic cancer arises when cell (biology), cells in the pancreas, a glandular organ behind the stomach, begin to multiply out of control and form a Neoplasm, mass. These cancerous cells have the malignant, ability to invade other parts of ...
. In turn, this impairs release of matrix metalloprotease enzymes in the tumor microenvironment, in turn slowing down metastasis of disease. Thus in conjunction with their low toxicity they are considered promising agents for combating oncological disease.


Host guest interactions

Calixarenes are used in commercial applications as sodium selective
electrode An electrode is an electrical conductor used to make contact with a nonmetallic part of a circuit (e.g. a semiconductor, an electrolyte, a vacuum or a gas). In electrochemical cells, electrodes are essential parts that can consist of a varie ...
s for the measurement of sodium levels in blood. Calixarenes also form complexes with
cadmium Cadmium is a chemical element; it has chemical symbol, symbol Cd and atomic number 48. This soft, silvery-white metal is chemically similar to the two other stable metals in group 12 element, group 12, zinc and mercury (element), mercury. Like z ...
,
lead Lead () is a chemical element; it has Chemical symbol, symbol Pb (from Latin ) and atomic number 82. It is a Heavy metal (elements), heavy metal that is density, denser than most common materials. Lead is Mohs scale, soft and Ductility, malleabl ...
,
lanthanide The lanthanide () or lanthanoid () series of chemical elements comprises at least the 14 metallic chemical elements with atomic numbers 57–70, from lanthanum through ytterbium. In the periodic table, they fill the 4f orbitals. Lutetium (el ...
s and
actinide The actinide () or actinoid () series encompasses at least the 14 metallic chemical elements in the 5f series, with atomic numbers from 89 to 102, actinium through nobelium. Number 103, lawrencium, is also generally included despite being part ...
s. Calix rene and the C70
fullerene A fullerene is an allotropes of carbon, allotrope of carbon whose molecules consist of carbon atoms connected by single and double bonds so as to form a closed or partially closed mesh, with fused rings of five to six atoms. The molecules may ...
in ''p''-xylene form a ball-and-socket supramolecular complex. Calixarenes also form exo-calix ammonium salts with aliphatic amines such as
piperidine Piperidine is an organic compound with the molecular formula (CH2)5NH. This heterocyclic amine consists of a six-membered ring containing five methylene bridges (–CH2–) and one amine bridge (–NH–). It is a colorless liquid with an odor de ...
. Derivatives or homologues of calix rene exhibit highly selective binding behavior towards anions (especially
halogen The halogens () are a group in the periodic table consisting of six chemically related elements: fluorine (F), chlorine (Cl), bromine (Br), iodine (I), and the radioactive elements astatine (At) and tennessine (Ts), though some authors would ...
anions) with changes in optical properties such as
fluorescence Fluorescence is one of two kinds of photoluminescence, the emission of light by a substance that has absorbed light or other electromagnetic radiation. When exposed to ultraviolet radiation, many substances will glow (fluoresce) with colore ...
. Calixarenes in general, and more specifically calix renes have been extensively investigated as platforms for catalysts. Some complexes compounds are active for hydrolytic reactions. Calixarenes are of interest as enzyme mimetics, components of ion sensitive electrodes or sensors, selective membranes, non-linear optics and in HPLC stationary phases.
Dead link. --> In addition, in
nanotechnology Nanotechnology is the manipulation of matter with at least one dimension sized from 1 to 100 nanometers (nm). At this scale, commonly known as the nanoscale, surface area and quantum mechanical effects become important in describing propertie ...
calixarenes are used as negative resist for high-resolution
electron beam lithography Electron-beam lithography (often abbreviated as e-beam lithography or EBL) is the practice of scanning a focused beam of electrons to draw custom shapes on a surface covered with an electron-sensitive film called a resist (exposing). The electron ...
. A tetrathia rene is found to mimic some properties of the
aquaporin Aquaporins, also called water channels, are channel proteins from a larger family of major intrinsic proteins that form pores in the membrane of biological cells, mainly facilitating transport of water between cells. The cell membranes of ...
proteins. This calixarene adopts a 1,3-alternate conformation (methoxy groups populate the lower ring) and water is not contained in the basket but grabbed by two opposing tert-butyl groups on the outer rim in a pincer. The nonporous and
hydrophobic In chemistry, hydrophobicity is the chemical property of a molecule (called a hydrophobe) that is seemingly repelled from a mass of water. In contrast, hydrophiles are attracted to water. Hydrophobic molecules tend to be nonpolar and, thu ...
crystals are soaked in water for 8 hours in which time the calixarene:water ratio nevertheless acquires the value of one. Calixarenes accelerate reactions taking place inside the concavity by a combination of local concentration effect and polar stabilization of the
transition state In chemistry, the transition state of a chemical reaction is a particular configuration along the reaction coordinate. It is defined as the state corresponding to the highest potential energy along this reaction coordinate. It is often marked w ...
. An extended resorcin rene cavitand is found to accelerate the
reaction rate The reaction rate or rate of reaction is the speed at which a chemical reaction takes place, defined as proportional to the increase in the concentration of a product per unit time and to the decrease in the concentration of a reactant per u ...
of a
Menshutkin reaction In organic chemistry, the Menshutkin reaction converts a tertiary amine into a quaternary ammonium salt by reaction with an alkyl halide. Similar reactions occur when tertiary phosphines are treated with alkyl halides. The reaction is the m ...
between quinuclidine and butylbromide by a factor of 1600. In heterocalixarenes the phenolic units are replaced by heterocycles, for instance by
furan Furan is a Heterocyclic compound, heterocyclic organic compound, consisting of a five-membered aromatic Ring (chemistry), ring with four carbon Atom, atoms and one oxygen atom. Chemical compounds containing such rings are also referred to as f ...
s in calix uranes and by
pyridine Pyridine is a basic (chemistry), basic heterocyclic compound, heterocyclic organic compound with the chemical formula . It is structurally related to benzene, with one methine group replaced by a nitrogen atom . It is a highly flammable, weak ...
s in calix yridines. Calixarenes have been used as the
macrocycle Macrocycles are often described as molecules and ions containing a ring of twelve or more atoms. Classical examples include the crown ethers, calixarenes, porphyrins, and cyclodextrins. Macrocycles describe a large, mature area of chemistry. ...
portion of a
rotaxane A rotaxane () is a mechanically interlocked molecular architecture consisting of a dumbbell-shaped molecule which is threaded through a macrocycle (see graphical representation). The two components of a rotaxane are kinetically trapped since ...
and two calixarene molecules covalently joined together by the lower rims form carcerands.


References

{{Authority control Chelating agents Cyclophanes Alkylphenols