Allorecognition
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Allorecognition is the ability of an individual organism to distinguish its own tissues from those of another. It manifests itself in the recognition of antigens expressed on the surface of cells of non-self origin. Allorecognition has been described in nearly all multicellular phyla. This article focuses on allorecognition from the standpoint of its significance in the evolution of multicellular organisms. For other articles which focus on its importance in medicine, molecular biology, and so forth, the following topics are recommended as well as those in the Categories links at the bottom of this page. *
Immune system The immune system is a network of biological systems that protects an organism from diseases. It detects and responds to a wide variety of pathogens, from viruses to bacteria, as well as Tumor immunology, cancer cells, Parasitic worm, parasitic ...
,
Immunology Immunology is a branch of biology and medicine that covers the study of Immune system, immune systems in all Organism, organisms. Immunology charts, measures, and contextualizes the Physiology, physiological functioning of the immune system in ...
*
Transplant rejection Transplant rejection occurs when transplanted tissue is rejected by the recipient's immune system, which destroys the transplanted tissue. Transplant rejection can be lessened by determining the molecular similitude between donor and recipien ...
*
Tissue typing Tissue typing is a procedure in which the tissues of a prospective donor and recipient are tested for compatibility prior to transplantation. Mismatched donor and recipient tissues can lead to rejection of the tissues. There are multiple methods of ...
* Major histocompatibility complex (MHC) The ability to discriminate between self and non-self is a fundamental requirement for life. At the most basic level, even single-celled organisms need to be able to distinguish between food and non-food, to respond appropriately to invading pathogens, and to avoid cannibalism. In sexually reproducing organisms, self/non-self discrimination is essential to ensuring species-specific egg/sperm interaction during fertilization. Hermaphroditic organisms, such as
annelid The annelids (), also known as the segmented worms, are animals that comprise the phylum Annelida (; ). The phylum contains over 22,000 extant species, including ragworms, earthworms, and leeches. The species exist in and have adapted to vario ...
s and certain plants, require recognition mechanisms to prevent self-fertilization. Such functions are all carried out by the
innate immune system The innate immune system or nonspecific immune system is one of the two main immunity strategies in vertebrates (the other being the adaptive immune system). The innate immune system is an alternate defense strategy and is the dominant immune s ...
, which employs evolutionarily conserved
pattern recognition receptor Pattern recognition receptors (PRRs) play a crucial role in the proper function of the innate immune system. PRRs are germline-encoded host sensors, which detect molecules typical for the pathogens. They are proteins expressed mainly by cells of th ...
s to eliminate cells displaying "nonself markers."


Evolution of multicellularity

The evolution of
multicellularity A multicellular organism is an organism that consists of more than one cell, unlike unicellular organisms. All species of animals, land plants and most fungi are multicellular, as are many algae, whereas a few organisms are partially uni- and pa ...
brought about various challenges, many of which could be met by increasingly sophisticated innate immune systems, but which also served as an evolutionary driving force for the development of
adaptive immune system The adaptive immune system (AIS), also known as the acquired immune system, or specific immune system is a subsystem of the immune system that is composed of specialized cells, organs, and processes that eliminate pathogens specifically. The ac ...
s. The adaptive or "specific" immune system in its fully qualified form (''i.e.'' based on
major histocompatibility complex The major histocompatibility complex (MHC) is a large Locus (genetics), locus on vertebrate DNA containing a set of closely linked polymorphic genes that code for Cell (biology), cell surface proteins essential for the adaptive immune system. The ...
(MHC),
T-cell receptor The T-cell receptor (TCR) is a protein complex, located on the surface of T cells (also called T lymphocytes). They are responsible for recognizing fragments of antigen as peptides bound to major histocompatibility complex (MHC) molecules. ...
s (TCR), and
antibodies An antibody (Ab) or immunoglobulin (Ig) is a large, Y-shaped protein belonging to the immunoglobulin superfamily which is used by the immune system to identify and neutralize antigens such as bacteria and viruses, including those that caus ...
) exists only in
jawed vertebrate Gnathostomata (; from Ancient Greek: (') 'jaw' + (') 'mouth') are jawed vertebrates. Gnathostome diversity comprises roughly 60,000 species, which accounts for 99% of all extant vertebrates, including all living bony fishes (both ray-finned ...
s, but an independently evolved adaptive immune system has been identified in
hagfish Hagfish, of the Class (biology), class Myxini (also known as Hyperotreti) and Order (biology), order Myxiniformes , are eel-shaped Agnatha, jawless fish (occasionally called slime eels). Hagfish are the only known living Animal, animals that h ...
and
lamprey Lampreys (sometimes inaccurately called lamprey eels) are a group of Agnatha, jawless fish comprising the order (biology), order Petromyzontiformes , sole order in the Class (biology), class Petromyzontida. The adult lamprey is characterize ...
s (non-jawed vertebrates). Multicellularity has arisen independently dozens of times in the history of life, in plants, animals, fungi, and prokaryotes, appearing first several billion years ago in
cyanobacteria Cyanobacteria ( ) are a group of autotrophic gram-negative bacteria that can obtain biological energy via oxygenic photosynthesis. The name "cyanobacteria" () refers to their bluish green (cyan) color, which forms the basis of cyanobacteri ...
. Two categories of advantages have been attributed to the early development of multicellular existence: advantages related to size, and advantages related to functional specialization and division of labor. Size advantages may include greater feeding efficiency or increased robustness. For example,
myxobacteria The myxobacteria ("slime bacteria") are a group of bacteria that predominantly live in the soil and feed on insoluble organic substances. The myxobacteria have very large genomes relative to other bacteria, e.g. 9–10 million nucleotides except ...
, moving in swarms, are able to maintain a high concentration of extracellular enzymes used to digest food, from which all the bacteria in the swarm benefit. Under various conditions, many microorganisms form
biofilm A biofilm is a Syntrophy, syntrophic Microbial consortium, community of microorganisms in which cell (biology), cells cell adhesion, stick to each other and often also to a surface. These adherent cells become embedded within a slimy ext ...
s which provide them with a protected environment. In organisms that have evolved functional specialization, an important division of labor may exist over reproduction: only a small fraction of cells contribute to the next generation.
Somatic Somatic may refer to: * Somatic (biology), referring to the cells of the body in contrast to the germ line cells ** Somatic cell, a non-gametic cell in a multicellular organism * Somatic nervous system, the portion of the vertebrate nervous syst ...
growth represents a form of altruism, where somatic cells give up reproduction helping
germline In biology and genetics, the germline is the population of a multicellular organism's cells that develop into germ cells. In other words, they are the cells that form gametes ( eggs and sperm), which can come together to form a zygote. They dif ...
cells reproduce.


Free rider problem

The extracellular enzymes secreted by swarming bacteria, the slime of a biofilm, or the soma cells in a differentiated organism represent public goods which are vulnerable to exploitation by cheaters. This issue is well known in economics and
evolutionary biology Evolutionary biology is the subfield of biology that studies the evolutionary processes such as natural selection, common descent, and speciation that produced the diversity of life on Earth. In the 1930s, the discipline of evolutionary biolo ...
as the "
free rider problem In economics, the free-rider problem is a type of market failure that occurs when those who benefit from resources, public goods and common pool resources do not pay for them or under-pay. Free riders may overuse common pool resources by not p ...
" or the "
tragedy of the commons The tragedy of the commons is the concept that, if many people enjoy unfettered access to a finite, valuable resource, such as a pasture, they will tend to overuse it and may end up destroying its value altogether. Even if some users exercised vo ...
." A free rider (or freeloader) is an individual that consumes a resource without paying for it, or pays less than the full cost. In multicellular organisms, cheaters may arise from mutations in somatic cells that no longer contribute to the common good, or ignore controls on their reproduction. Another possibility may arise from somatic fusion: there are multicellular life-styles where there are few if any physical barriers to the intermingling of cells (for example: sponges, fungal mycelia) and even among organisms that have evolved physical integuments representing a first line of defense against invasion, opportunities for cellular exchange occur. Witness, for example, the spread of
devil facial tumour disease Devil facial tumour disease (DFTD) is an aggressive non-viral clonally transmissible cancer which affects Tasmanian devils, a marsupial native to the Australian island of Tasmania. The cancer manifests itself as lumps of soft and ulcerating tis ...
among
Tasmanian devil The Tasmanian devil (''Sarcophilus harrisii''; palawa kani: ''purinina'') is a carnivorous marsupial of the family Dasyuridae. It was formerly present across mainland Australia, but became extinct there around 3,500 years ago; it is now con ...
s and
transmissible venereal tumor A canine transmissible venereal tumor (CTVT), also known as a transmissible venereal tumor (TVT), canine transmissible venereal sarcoma (CTVS), sticker tumor and infectious sarcoma, is a histiocytic tumor of the external genitalia of the dog and ...
in dogs. In
metazoan Animals are multicellular, eukaryotic organisms in the biological kingdom Animalia (). With few exceptions, animals consume organic material, breathe oxygen, have myocytes and are able to move, can reproduce sexually, and grow from a ho ...
s, defense against disruption of the multicellular life style by such cheaters takes two major forms. First, a consistent feature of the multicellular life cycle is the interposition of a unicellular phase, even among organisms whose major mode of propagation may be via many-celled vegetative propagules. This unicellular phase usually takes the form of a sexually produced zygote. Passage through a unicellular bottleneck assures that each representative of the next generation of organisms represents a distinct clone. Some offspring will carry a large number of deleterious mutations and will die off, while other offspring will carry few. In this manner, the organism bypasses "
Muller's ratchet In evolutionary genetics, Muller's ratchet (named after Hermann Joseph Muller, by analogy with a ratchet effect) is a process which, in the absence of recombination (especially in an asexual population), results in an accumulation of irreversibl ...
," the process by which the genomes of an asexual population accumulate deleterious mutations in an irreversible manner. The second defense against cheaters is the development of allorecognition mechanisms that guard against invasion by parasitic replicators. Allorecognition acts as an agent of
kin selection Kin selection is a process whereby natural selection favours a trait due to its positive effects on the reproductive success of an organism's relatives, even when at a cost to the organism's own survival and reproduction. Kin selection can lead ...
by restricting fusion and community acceptance to related individuals. If related individuals fuse, the benefits of fusion will still apply, while the costs of competition for shared resources or reproductive opportunities will be reduced by a fraction proportional to the degree of relatedness between the fusing partners. If unrelated individuals fuse, or if a mutated cell arises within an organism that is distinguishable from self by the allorecognition system, a rejection response will be activated. As a general rule, rejection is mediated by the gene products of highly variable loci, which must match (or nearly match) between organisms for fusion to be successful.


Allorecognition phenomena

Allorecognition phenomena have been recognized in bacterial self-identity and social recognition systems, kin discrimination in social amoebae, fungal mating types, fungal vegetative incompatibility, plant self-incompatibility systems, colonial marine invertebrates (such as corals, sponges, hydroids, bryozoans, and ascidians), and of course, vertebrates. The manner in which allorecognition manifests itself in these different systems varies greatly. Bacteria, for instance, secrete
bacteriocin Bacteriocins are proteinaceous or peptide, peptidic toxins produced by bacteria to inhibit the growth of similar or closely related bacterial strain(s). They are similar to yeast and paramecium killing factors, and are structurally, functionally ...
s, proteinaceous toxins specifically targeted against members of their own species. Colonies of marine invertebrates, each representing a single genotype, expand across the ocean floor by asexual reproduction. Where colonies meet, they may, if compatible, fuse to form a single unit, or if incompatible, they may aggressively attempt to overgrow, poison, sting, or consume each other.


Innate and adaptive immune systems

Vertebrate immunity is dependent on both adaptive and innate immune systems. In vertebrates, the innate immune system is composed of cells such as
neutrophils Neutrophils are a type of phagocytic white blood cell and part of innate immunity. More specifically, they form the most abundant type of granulocytes and make up 40% to 70% of all white blood cells in humans. Their functions vary in different ...
and
macrophages Macrophages (; abbreviated MPhi, φ, MΦ or MP) are a type of white blood cell of the innate immune system that engulf and digest pathogens, such as cancer cells, microbes, cellular debris and foreign substances, which do not have proteins that ...
(which also have a role in the adaptive immune system as
antigen presenting cells An antigen-presenting cell (APC) or accessory cell is a cell that displays an antigen bound by major histocompatibility complex (MHC) proteins on its surface; this process is known as antigen presentation. T cells may recognize these complexes u ...
), as well as molecular pathways such as the
complement system The complement system, also known as complement cascade, is a part of the humoral, innate immune system and enhances (complements) the ability of antibodies and phagocytic cells to clear microbes and damaged cells from an organism, promote inf ...
which react to microbial non-self. The innate immune system enables a rapid inflammatory response that contains the infection, and it activates the adaptive immune system, which eliminates the pathogen and, through
immunological memory Immunological memory is the ability of the immune system to quickly and specifically recognize an antigen that the body has previously encountered and initiate a corresponding immune response. Generally, they are secondary, tertiary and other subse ...
, provides long term protection against reinfection. Comprehensive sequence searches across multiple taxonomic groups have failed to identify MHC and TCRs outside of the jawed vertebrates. Allorecognition in these animals rely on molecular mechanisms distinct from those of the jawed vertebrates. In sponges, various receptors (sponge adhesion molecules, receptor tyrosine kinase) with domains similar to those found in
immunoglobulins An antibody (Ab) or immunoglobulin (Ig) is a large, Y-shaped protein belonging to the immunoglobulin superfamily which is used by the immune system to identify and neutralize antigens such as bacteria and viruses, including those that cause di ...
have been identified. Sequence variability in "hot spots" have been identified in these receptors. It would appear that molecules which, later in evolution, were exploited in the adaptive immune response, had an earlier role in innate recognition. Lampreys and hagfish appear to have evolved, by
convergent evolution Convergent evolution is the independent evolution of similar features in species of different periods or epochs in time. Convergent evolution creates analogous structures that have similar form or function but were not present in the last comm ...
, an adaptive immune response that is independent and distinct from the adaptive immune systems of higher vertebrates.
Lymphocyte A lymphocyte is a type of white blood cell (leukocyte) in the immune system of most vertebrates. Lymphocytes include T cells (for cell-mediated and cytotoxic adaptive immunity), B cells (for humoral, antibody-driven adaptive immunity), an ...
-like cells in these fish express highly variable lymphocyte receptor genes, which undergo somatic rearrangements reminiscent of the manner in which mammalian immunoglobulin genes are rearranged during development.


Summary

In summary, allorecognition, the ability to distinguish self from non-self, is basic to all life, unicellular as well as multicellular. The earliest recognition systems were innate, and were based on the recognition of self molecules. The evolution of multicellular forms brought about selective pressures for ever-increasing sophistication to innate immune systems. Adaptive immune systems, based on the recognition of non-self, have arisen independently in two lines of
chordates A chordate ( ) is a bilaterian animal belonging to the phylum Chordata ( ). All chordates possess, at some point during their larval or adult stages, five distinctive physical characteristics ( synapomorphies) that distinguish them from ot ...
, and exploit molecules and cellular systems which had a previous role in innate immune responses. Allorecognition as it currently exists in mammals can be traced back as the result of sequential modification to immunity mechanisms dating back to some of the earliest multicellular organisms.


See also

*
Immune system The immune system is a network of biological systems that protects an organism from diseases. It detects and responds to a wide variety of pathogens, from viruses to bacteria, as well as Tumor immunology, cancer cells, Parasitic worm, parasitic ...
,
Immunology Immunology is a branch of biology and medicine that covers the study of Immune system, immune systems in all Organism, organisms. Immunology charts, measures, and contextualizes the Physiology, physiological functioning of the immune system in ...
*
Transplant rejection Transplant rejection occurs when transplanted tissue is rejected by the recipient's immune system, which destroys the transplanted tissue. Transplant rejection can be lessened by determining the molecular similitude between donor and recipien ...
*
Tissue typing Tissue typing is a procedure in which the tissues of a prospective donor and recipient are tested for compatibility prior to transplantation. Mismatched donor and recipient tissues can lead to rejection of the tissues. There are multiple methods of ...
* Major histocompatibility complex (MHC)


References

{{reflist Immune system Immunology Transplantation medicine Evolutionary biology Articles containing video clips