Archaeopteryx is an interactive
computer software
Software is a set of computer programs and associated documentation and data. This is in contrast to hardware, from which the system is built and which actually performs the work.
At the lowest programming level, executable code consists ...
program, written in
Java
Java (; id, Jawa, ; jv, ꦗꦮ; su, ) is one of the Greater Sunda Islands in Indonesia. It is bordered by the Indian Ocean to the south and the Java Sea to the north. With a population of 151.6 million people, Java is the world's mo ...
, for
viewing
Viewing may refer to:
* Remote viewing
* Social viewing
* Viewing (funeral), the part of funerals where family and friends see the deceased
* Wildlife viewing
See also
* Far sight (disambiguation)
* Public viewing area
A public viewing area is ...
, editing, and analyzing
phylogenetic trees. This type of program can be used for a variety of
analyses of
molecular data sets, but is particularly designed for
phylogenomics
Phylogenomics is the intersection of the fields of evolution and genomics. The term has been used in multiple ways to refer to analysis that involves genome data and evolutionary reconstructions. It is a group of techniques within the larger fields ...
.
Besides tree description formats with limited expressiveness (such as Newick/New Hamphshire, Nexus), it also implements the
phyloXML format.
Archaeopteryx is the successor to Java program ''A Tree Viewer'' (ATV).
References
External links
phyloXML
*
ttps://sites.google.com/site/cmzmasek/home/software/archaeopteryx Archaeopteryx
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Phylogenetics software