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Plastid DNA
Chloroplast DNA (cpDNA), also known as plastid DNA (ptDNA) is the DNA located in chloroplasts, which are photosynthetic organelles located within the cells of some eukaryotic organisms. Chloroplasts, like other types of plastid, contain a genome separate from that in the cell nucleus. The existence of chloroplast DNA was identified biochemically in 1959, and confirmed by electron microscopy in 1962. The discoveries that the chloroplast contains ribosomes and performs protein synthesis revealed that the chloroplast is genetically semi-autonomous. The first complete chloroplast genome sequences were published in 1986, ''Nicotiana tabacum'' (tobacco) by Sugiura and colleagues and ''Marchantia polymorpha'' (liverwort) by Ozeki et al. Since then, tens of thousands of chloroplast genomes from various species have been sequenced. Molecular structure Chloroplast DNAs are circular, and are typically 120,000–170,000 base pairs long. They can have a contour length of around 30–60 micro ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Nicotiana Tabacum
''Nicotiana tabacum'', or cultivated tobacco, is an annually grown herbaceous plant of the genus ''Nicotiana''. ''N. tabacum'' is the most commonly grown species in the genus ''Nicotiana,'' as the plant's leaves are commercially harvested to be processed into tobacco for human use. The plant is tropical in origin, is commonly grown throughout the world, and is often found in cultivation. It grows to heights between . Research is ongoing into its ancestry among wild ''Nicotiana'' species, but it is believed to be a hybrid of '' Nicotiana sylvestris'', '' N. tomentosiformis'', and possibly '' N. otophora''. Description It is an annual plant that grows high and is sticky haired on all parts. The stems are thick and not very branched. The leaves can be over long with the blades ovate to elliptical, or obovate, pointed towards the front and, at the base, run down the stem or are sessile, encompassing the stem. The scented inflorescences are multi-branched panicles. The flower s ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Ribosomal RNA
Ribosomal ribonucleic acid (rRNA) is a type of non-coding RNA which is the primary component of ribosomes, essential to all cells. rRNA is a ribozyme which carries out protein synthesis in ribosomes. Ribosomal RNA is transcribed from ribosomal DNA (rDNA) and then bound to ribosomal proteins to form SSU rRNA, small and LSU rRNA, large ribosome subunits. rRNA is the physical and mechanical factor of the ribosome that forces transfer RNA (tRNA) and messenger RNA (mRNA) to process and Translation (biology), translate the latter into proteins. Ribosomal RNA is the predominant form of RNA found in most cells; it makes up about 80% of cellular RNA despite never being translated into proteins itself. Ribosomes are composed of approximately 60% rRNA and 40% ribosomal proteins, though this ratio differs between Prokaryote, prokaryotes and Eukaryote, eukaryotes. Structure Although the primary structure of rRNA sequences can vary across organisms, Base pair, base-pairing within these sequ ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Stroma (fluid)
Stroma, in botany, refers to the colorless fluid surrounding the grana within the chloroplast. Within the stroma are grana (stacks of thylakoid), the sub-organelles where photosynthesis is started before the chemical changes are completed in the stroma. Kramer & Scott ''flower'' iv. 80 1979 Photosynthesis occurs in two stages. In the first stage, ''light-dependent reactions'' capture the energy of light and use it to make the energy-storage molecules ATP and NADPH. During the second stage, the ''light-independent reactions'' use these products to fix carbon by capturing and reducing carbon dioxide. The series of biochemical redox reactions which take place in the stroma are collectively called the Calvin cycle or ''light-independent reactions''. There are three phases: carbon fixation, reduction reactions, and ribulose 1,5-bisphosphate (RuBP) regeneration. The stroma is also the location of chloroplast DNA and chloroplast ribosomes, and thus also the location of molecul ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Green Algae
The green algae (: green alga) are a group of chlorophyll-containing autotrophic eukaryotes consisting of the phylum Prasinodermophyta and its unnamed sister group that contains the Chlorophyta and Charophyta/ Streptophyta. The land plants ( Embryophytes) have emerged deep within the charophytes as a sister of the Zygnematophyceae. Since the realization that the Embryophytes emerged within the green algae, some authors are starting to include them. The completed clade that includes both green algae and embryophytes is monophyletic and is referred to as the clade Viridiplantae and as the kingdom Plantae. The green algae include unicellular and colonial flagellates, most with two flagella per cell, as well as various colonial, coccoid (spherical), and filamentous forms, and macroscopic, multicellular seaweeds. There are about 22,000 species of green algae, many of which live most of their lives as single cells, while other species form coenobia (colonies), long filaments ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Nucleoid
The nucleoid (meaning '' nucleus-like'') is an irregularly shaped region within the prokaryotic cell that contains all or most of the genetic material. The chromosome of a typical prokaryote is circular, and its length is very large compared to the cell dimensions, so it needs to be compacted in order to fit. In contrast to the nucleus of a eukaryotic cell, it is not surrounded by a nuclear membrane. Instead, the nucleoid forms by condensation and functional arrangement with the help of chromosomal architectural proteins and RNA molecules as well as DNA supercoiling. The length of a genome widely varies (generally at least a few million base pairs) and a cell may contain multiple copies of it. There is not yet a high-resolution structure known of a bacterial nucleoid, however key features have been researched in ''Escherichia coli'' as a model organism. In ''E. coli'', the chromosomal DNA is on average negatively supercoiled and folded into plectonemic loops, which are confi ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Histone
In biology, histones are highly basic proteins abundant in lysine and arginine residues that are found in eukaryotic cell nuclei and in most Archaeal phyla. They act as spools around which DNA winds to create structural units called nucleosomes. Nucleosomes in turn are wrapped into 30- nanometer fibers that form tightly packed chromatin. Histones prevent DNA from becoming tangled and protect it from DNA damage. In addition, histones play important roles in gene regulation and DNA replication. Without histones, unwound DNA in chromosomes would be very long. For example, each human cell has about 1.8 meters of DNA if completely stretched out; however, when wound about histones, this length is reduced to about 9 micrometers (0.09 mm) of 30 nm diameter chromatin fibers. There are five families of histones, which are designated H1/H5 (linker histones), H2, H3, and H4 (core histones). The nucleosome core is formed of two H2A-H2B dimers and a H3-H4 tetramer. The tight wr ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Nucleoids
The nucleoid (meaning '' nucleus-like'') is an irregularly shaped region within the prokaryotic cell that contains all or most of the genetic material. The chromosome of a typical prokaryote is circular, and its length is very large compared to the cell dimensions, so it needs to be compacted in order to fit. In contrast to the nucleus of a eukaryotic cell, it is not surrounded by a nuclear membrane. Instead, the nucleoid forms by condensation and functional arrangement with the help of chromosomal architectural proteins and RNA molecules as well as DNA supercoiling. The length of a genome widely varies (generally at least a few million base pairs) and a cell may contain multiple copies of it. There is not yet a high-resolution structure known of a bacterial nucleoid, however key features have been researched in ''Escherichia coli'' as a model organism. In ''E. coli'', the chromosomal DNA is on average negatively supercoiled and folded into plectonemic loops, which are confi ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Porphyra
''Porphyra'' is a genus of coldwater seaweeds that grow in cold, shallow seawater. More specifically, it belongs to red algae phylum of laver species (from which comes laverbread), comprising approximately 70 species.Brodie, J.A. and Irvine, L.M. 2003. ''Seaweeds of the British Isles.'' Volume 1 Part 3b. The Natural History Museum, London. It grows in the intertidal zone, typically between the upper intertidal zone and the splash zone in cold waters of temperate oceans. In East Asia, it is used to produce the sea vegetable products ''nori'' (in Japan) and '' gim'' (in Korea). There are considered to be 60–70 species of ''Porphyra'' worldwide Kain, J.M. 1991. Cultivation of attached seaweeds. in Guiry, M.D. and Blunden, G. 1992. ''Seaweed Resources in Europe: Uses and Potential.'' John Wiley and Sons, Chichester and seven around Britain and Ireland, where it has been traditionally used to produce edible sea vegetables on the Irish Sea coast.Hardy, F.G. and Guiry, M.D. 2006. ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Peas
Pea (''pisum'' in Latin) is a pulse or fodder crop, but the word often refers to the seed or sometimes the pod of this flowering plant species. Peas are eaten as a vegetable. Carl Linnaeus gave the species the scientific name ''Pisum sativum'' in 1753 (meaning cultivated pea). Some sources now treat it as ''Lathyrus oleraceus''; however the need and justification for the change is disputed. Each pod contains several seeds (peas), which can have green or yellow cotyledons when mature. Botanically, pea pods are fruit, since they contain seeds and develop from the ovary of a "pea" flower. The name is also used to describe other edible seeds from the Fabaceae such as the pigeon pea (''Cajanus cajan''), the cowpea (''Vigna unguiculata''), the seeds from several species of '' Lathyrus'' and is used as a compound form - for instance, in Sturt's desert pea. Peas are annual plants, with a life cycle of one year. They are a cool-season crop grown in many parts of the world; planti ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Red Algae
Red algae, or Rhodophyta (, ; ), make up one of the oldest groups of eukaryotic algae. The Rhodophyta comprises one of the largest Phylum, phyla of algae, containing over 7,000 recognized species within over 900 Genus, genera amidst ongoing taxonomic revisions. The majority of species (6,793) are Florideophyceae, and mostly consist of multicellular, ocean, marine algae, including many notable seaweeds. Red algae are abundant in marine habitats. Approximately 5% of red algae species occur in freshwater environments, with greater concentrations in warmer areas. Except for two coastal cave dwelling species in the asexual class Cyanidiophyceae, no terrestrial species exist, which may be due to an evolutionary bottleneck in which the last common ancestor lost about 25% of its core genes and much of its evolutionary plasticity. Red algae form a distinct group characterized by eukaryotic cells without flagella and centrioles, chloroplasts without external endoplasmic reticulum or unstack ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Glaucophyta
The glaucophytes, also known as glaucocystophytes or glaucocystids, are a small group of unicellular algae found in freshwater and moist terrestrial environments, less common today than they were during the Proterozoic. The stated number of species in the group varies from about 14 to 26. Together with the red algae (Rhodophyta) and the green algae plus land plants ( Viridiplantae or Chloroplastida), they form the Archaeplastida. The glaucophytes are of interest to biologists studying the evolution of chloroplasts as they may be similar to the original algal type that led to the red algae and green plants, i.e. glaucophytes may be basal Archaeplastida. Unlike red and green algae, glaucophytes only have asexual reproduction. Reproduction Unlike red and green algae, glaucophytes only have asexual reproduction. Glaucophytes reproduce exclusively through asexual means. They undergo open mitosis without centrioles, a trait shared with other basal eukaryotes. Reproductive modes ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Conserved Sequence
In evolutionary biology, conserved sequences are identical or similar sequences in nucleic acids ( DNA and RNA) or proteins across species ( orthologous sequences), or within a genome ( paralogous sequences), or between donor and receptor taxa ( xenologous sequences). Conservation indicates that a sequence has been maintained by natural selection. A highly conserved sequence is one that has remained relatively unchanged far back up the phylogenetic tree, and hence far back in geological time. Examples of highly conserved sequences include the RNA components of ribosomes present in all domains of life, the homeobox sequences widespread amongst eukaryotes, and the tmRNA in bacteria. The study of sequence conservation overlaps with the fields of genomics, proteomics, evolutionary biology, phylogenetics, bioinformatics and mathematics. History The discovery of the role of DNA in heredity, and observations by Frederick Sanger of variation between animal insulins in 194 ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
