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Novosphingobium Acidiphilum
''Novosphingobium acidiphilum'' is a Gram-negative, rod-shaped, acidophilic, non-spore-forming and motile bacterium from the genus of Novosphingobium which has been isolated from the subsurface water of the lake Grosse Fuchskuhle in Brandenburg in Germany Germany, officially the Federal Republic of Germany, is a country in Central Europe. It lies between the Baltic Sea and the North Sea to the north and the Alps to the south. Its sixteen States of Germany, constituent states have a total popu .... References Further reading * * External linksType strain of ''Novosphingobium acidiphilum'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Acidophiles Bacteria described in 2009 Sphingomonadales {{Sphingomonadales-stub ...
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LPSN
List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy image:Hierarchical clustering diagram.png, 280px, Generalized scheme of taxonomy Taxonomy is a practice and science concerned with classification or categorization. Typically, there are two parts to it: the development of an underlying scheme o ... of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclature of Prokaryotes. The database was curated from 1997 to June 2013 by Jean P. Euzéby. From July 2013 to January 2020, LPSN was curated by Aidan C. Parte. In February 2020, a new version of LPSN was published as a service of the Leibniz Institute DSMZ, thereby also integrating the Prokaryotic Nomenclature Up-to-date service and since 2022 LPSN is interconnected with the Type (Strain) Genome Server (TYGS), DSMZ's high-throughput platform for accurate genome-based taxonomy. See also * Code o ...
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Gram-negative
Gram-negative bacteria are bacteria that, unlike gram-positive bacteria, do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. Their defining characteristic is that their cell envelope consists of a thin peptidoglycan cell wall sandwiched between an inner ( cytoplasmic) membrane and an outer membrane. These bacteria are found in all environments that support life on Earth. Within this category, notable species include the model organism '' Escherichia coli'', along with various pathogenic bacteria, such as '' Pseudomonas aeruginosa'', '' Chlamydia trachomatis'', and '' Yersinia pestis''. They pose significant challenges in the medical field due to their outer membrane, which acts as a protective barrier against numerous antibiotics (including penicillin), detergents that would normally damage the inner cell membrane, and the antimicrobial enzyme lysozyme produced by animals as part of their innate immune system. Furthe ...
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Rod-shaped
Bacterial cellular morphologies are the shapes that are characteristic of various types of bacteria and often key to their identification. Their direct examination under a light microscope enables the classification of these bacteria (and archaea). Generally, the basic morphologies are spheres (coccus) and round-ended cylinders or rod shaped (bacillus). But, there are also other morphologies such as helically twisted cylinders (example '' Spirochetes''), cylinders curved in one plane (selenomonads) and unusual morphologies (the square, flat box-shaped cells of the Archaean genus '' Haloquadratum)''. Other arrangements include pairs, tetrads, clusters, chains and palisades. Types Coccus A coccus (plural ''cocci'', from the Latin ''coccinus'' (scarlet) and derived from the Greek ''kokkos'' (berry)), is any microorganism (usually bacteria) whose overall shape is spherical or nearly spherical. Coccus refers to the shape of the bacteria and can contain multiple genera, such as s ...
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Acidophilic
Acidophiles or acidophilic organisms are those that thrive under highly acidic conditions (usually at pH 5.0 or below). These organisms can be found in different branches of the tree of life, including Archaea, Bacteria,Becker, A.Types of Bacteria Living in Acidic pH" Retrieved 10 May 2017. and Eukarya. Examples A list of these organisms includes: Archaea :* Sulfolobales, an order in the Thermoproteota branch of Archaea :* Thermoplasmatales, an order in the Euryarchaeota branch of Archaea :* ARMAN, in the Euryarchaeota branch of Archaea :* '' Acidianus brierleyi, A. infernus'', facultatively anaerobic thermoacidophilic archaebacteria :* ''Halarchaeum acidiphilum'', acidophilic member of the Halobacteriacaeae :* ''Metallosphaera sedula'', thermoacidophilic Bacteria :* Acidobacteriota, a phylum of Bacteria :* Acidithiobacillales, an order of Pseudomonadota e.g. ''A. ferrooxidans, A. thiooxidans'' :*''Thiobacillus prosperus, T. acidophilus, T. organovorus, T. cuprinus'' :*'' Ace ...
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Spore
In biology, a spore is a unit of sexual reproduction, sexual (in fungi) or asexual reproduction that may be adapted for biological dispersal, dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores form part of the Biological life cycle, life cycles of many plants, algae, fungus, fungi and protozoa. They were thought to have appeared as early as the mid-late Ordovician period as an adaptation of early land plants. Bacterial spores are not part of a sexual cycle, but are resistant structures used for survival under unfavourable conditions. Myxozoan spores release amoeboid infectious germs ("amoebulae") into their hosts for parasitic infection, but also reproduce within the hosts through the pairing of two nuclei within the plasmodium, which develops from the amoebula. In plants, spores are usually haploid and unicellular and are produced by meiosis in the sporangium of a diploid sporophyte. In some rare cases, a diploid spore is also p ...
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Novosphingobium
''Novosphingobium'' is a genus of Gram-negative bacteria that includes ''N. taihuense'', which can degrade aromatic compounds such as phenol, aniline, nitrobenzene and phenanthrene. The species ''N. aromativorans'', which was first found in Ulsan Bay, similarly degrades aromatic molecules of two to five rings. Species Accepted Species ''Novosphingobium'' comprises the following species: * '' Novosphingobium acidiphilum'' Glaeser ''et al''. 2009 * '' Novosphingobium aquaticum'' Glaeser ''et al''. 2013 * '' Novosphingobium aquimarinum'' Le ''et al''. 2020 * '' Novosphingobium aquiterrae'' Lee ''et al''. 2014 * '' Novosphingobium arabidopsis'' Lin ''et al''. 2014 * '' Novosphingobium aromaticivorans'' corrig. (Balkwill ''et al''. 1997) Takeuchi ''et al''. 2001 * '' Novosphingobium arvoryzae'' Sheu ''et al''. 2018 * '' Novosphingobium barchaimii'' Niharika ''et al''. 2013 * '' Novosphingobium bradum'' Sheu ''et al''. 2016 * '' Novosphingobium capsulatum'' (Leifson 1962) Takeuchi ' ...
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Subsurface Water
Groundwater is the water present beneath Earth's surface in rock and soil pore spaces and in the fractures of rock formations. About 30 percent of all readily available fresh water in the world is groundwater. A unit of rock or an unconsolidated deposit is called an ''aquifer'' when it can yield a usable quantity of water. The depth at which soil pore spaces or fractures and voids in rock become completely saturated with water is called the ''water table''. Groundwater is recharged from the surface; it may discharge from the surface naturally at springs and seeps, and can form oases or wetlands. Groundwater is also often withdrawn for agricultural, municipal, and industrial use by constructing and operating extraction wells. The study of the distribution and movement of groundwater is ''hydrogeology'', also called groundwater hydrology. Typically, groundwater is thought of as water flowing through shallow aquifers, but, in the technical sense, it can also contain soil moisture ...
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Brandenburg
Brandenburg, officially the State of Brandenburg, is a States of Germany, state in northeastern Germany. Brandenburg borders Poland and the states of Berlin, Mecklenburg-Vorpommern, Lower Saxony, Saxony-Anhalt, and Saxony. It is the List of German states by area, fifth-largest German state by area and the List of German states by population, tenth-most populous, with 2.5 million residents. Potsdam is the state capital and largest city. Other major towns are Cottbus, Brandenburg an der Havel and Frankfurt (Oder). Brandenburg surrounds the national capital and city-state of Berlin. Together they form the Berlin/Brandenburg Metropolitan Region, the third-largest Metropolitan regions in Germany, metropolitan area in Germany. There was Fusion of Berlin and Brandenburg#1996 fusion attempt, an unsuccessful attempt to unify both states in 1996, however the states still cooperate on many matters. Brandenburg originated in the Northern March in the 900s AD, from areas conquered from the ...
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Germany
Germany, officially the Federal Republic of Germany, is a country in Central Europe. It lies between the Baltic Sea and the North Sea to the north and the Alps to the south. Its sixteen States of Germany, constituent states have a total population of over 84 million in an area of , making it the most populous member state of the European Union. It borders Denmark to the north, Poland and the Czech Republic to the east, Austria and Switzerland to the south, and France, Luxembourg, Belgium, and the Netherlands to the west. The Capital of Germany, nation's capital and List of cities in Germany by population, most populous city is Berlin and its main financial centre is Frankfurt; the largest urban area is the Ruhr. Settlement in the territory of modern Germany began in the Lower Paleolithic, with various tribes inhabiting it from the Neolithic onward, chiefly the Celts. Various Germanic peoples, Germanic tribes have inhabited the northern parts of modern Germany since classical ...
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Acidophiles
Acidophiles or acidophilic organisms are those that thrive under highly acidic conditions (usually at pH 5.0 or below). These organisms can be found in different branches of the tree of life, including Archaea, Bacteria,Becker, A.Types of Bacteria Living in Acidic pH" Retrieved 10 May 2017. and Eukarya. Examples A list of these organisms includes: Archaea :* Sulfolobales, an order in the Thermoproteota branch of Archaea :* Thermoplasmatales, an order in the Euryarchaeota branch of Archaea :* ARMAN, in the Euryarchaeota branch of Archaea :* ''Acidianus brierleyi, A. infernus'', facultatively anaerobic thermoacidophilic archaebacteria :* ''Halarchaeum acidiphilum'', acidophilic member of the Halobacteriacaeae :* ''Metallosphaera sedula'', thermoacidophilic Bacteria :* Acidobacteriota, a phylum of Bacteria :* Acidithiobacillales, an order of Pseudomonadota e.g. ''A. ferrooxidans, A. thiooxidans'' :*''Thiobacillus prosperus, T. acidophilus, T. organovorus, T. cuprinus'' :*''Aceto ...
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Bacteria Described In 2009
Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one Cell (biology), biological cell. They constitute a large domain (biology), domain of Prokaryote, prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit the air, soil, water, Hot spring, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria play a vital role in many stages of the nutrient cycle by recycling nutrients and the nitrogen fixation, fixation of nitrogen from the Earth's atmosphere, atmosphere. The nutrient cycle includes the decomposition of cadaver, dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, suc ...
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