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Mycolicibacterium Aubagnense
''Mycolicibacterium aubagnense'' is a species of the phylum Actinomycetota (Gram-positive bacteria with high G+C ratio, guanine and cytosine content, one of the dominant phyla of all bacteria), belonging to the genus ''Mycolicibacterium''. Etymology N.L. neut. adj. ''aubagnense'', pertaining to Aubagne, the city from where the first patient originated. References External linksType strain of ''Mycobacterium aubagnense'' at Bac''Dive'' - the Bacterial Diversity Metadatabase
Acid-fast bacilli Nontuberculous mycobacteria, aubagnense Bacteria described in 2006 Mycobacteriales {{Mycobacterium-stub ...
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CCUG
Culture Collection University of Gothenburg (CCUG) is a Swedish microbial culture repository located in Gothenburg (Sweden) established by Enevold Falsen in 1968 and affiliated with the University of Gothenburg. The current curator is Prof. Dr. Edward R. B. Moore and it maintains bacterial, Filamentous fungi, filamentous fungal and yeasts cultures, but it does not hold extremophiles and does not dispatch the most hazardous organisms classified in biosafety level 3. More than 73,000 strains of more than 4,500 species have so far been examined, whereof more than 21,000 are displayed on Internet. It represents the largest public collection of bacteria in Europe. The CCUG has been devoted to the identification of bacteria. The search engine is sophisticated and useful for clinical microbiologists who may check their diagnosis of an unusual species or order on-line a reference strain. The CCUG also performs research and development of novel methods for rapid diagnosis of infectious disea ...
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Actinomycetota
The ''Actinomycetota'' (or ''Actinobacteria'') are a phylum of all gram-positive bacteria. They can be terrestrial or aquatic. They are of great economic importance to humans because agriculture and forests depend on their contributions to soil systems. In soil they help to decompose the organic matter of dead organisms so the molecules can be taken up anew by plants. While this role is also played by fungi, ''Actinomycetota'' are much smaller and likely do not occupy the same ecological niche. In this role the colonies often grow extensive mycelia, like a fungus would, and the name of an important order of the phylum, '' Actinomycetales'' (the actinomycetes), reflects that they were long believed to be fungi. Some soil actinomycetota (such as ''Frankia'') live symbiotically with the plants whose roots pervade the soil, fixing nitrogen for the plants in exchange for access to some of the plant's saccharides. Other species, such as many members of the genus ''Mycobacterium'', ...
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Gram-positive
In bacteriology, gram-positive bacteria are bacteria that give a positive result in the Gram stain test, which is traditionally used to quickly classify bacteria into two broad categories according to their type of cell wall. Gram-positive bacteria take up the crystal violet stain used in the test, and then appear to be purple-coloured when seen through an optical microscope. This is because the thick peptidoglycan layer in the bacterial cell wall retains the stain after it is washed away from the rest of the sample, in the decolorization stage of the test. Conversely, gram-negative bacteria cannot retain the violet stain after the decolorization step; alcohol used in this stage degrades the outer membrane of gram-negative cells, making the cell wall more porous and incapable of retaining the crystal violet stain. Their peptidoglycan layer is much thinner and sandwiched between an inner cell membrane and a bacterial outer membrane, causing them to take up the counterstain ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic re ...
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G+C Ratio
In molecular biology and genetics, GC-content (or guanine-cytosine content) is the percentage of nitrogenous bases in a DNA or RNA molecule that are either guanine (G) or cytosine (C). This measure indicates the proportion of G and C bases out of an implied four total bases, also including adenine and thymine in DNA and adenine and uracil in RNA. GC-content may be given for a certain fragment of DNA or RNA or for an entire genome. When it refers to a fragment, it may denote the GC-content of an individual gene or section of a gene (domain), a group of genes or gene clusters, a non-coding region, or a synthetic oligonucleotide such as a primer. Structure Qualitatively, guanine (G) and cytosine (C) undergo a specific hydrogen bonding with each other, whereas adenine (A) bonds specifically with thymine (T) in DNA and with uracil (U) in RNA. Quantitatively, each GC base pair is held together by three hydrogen bonds, while AT and AU base pairs are held together by two hydr ...
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Mycolicibacterium
''Mycolicibacterium'' is a genus of Gram-positive rod-shaped bacteria in the family ''Mycobacteriaceae'' from the order Mycobacteriales. Members of ''Mycolicibacterium'' were demarcated from the larger genus ''Mycobacterium'' in 2018 by Gupta et al. based on evidence from various phylogenetic trees constructed based on conserved genome sequences, comparative genomic analyses and average amino acid identity values. In addition to this genus, the study proposed the division of Mycobacterium into a total of five distinct genera, which was met with some resistance by some of the scientific community. The resistance was based on the grounds that Mycobacterium contains some clinically relevant species and name changes might cause confusion among clinicians and other researchers. In 2020, Yamada et al. analyzed the fundamental morphological properties of the new genera, including the cell diameter, cell length, cell perimeter, cell circularity and aspect ratio, and determined that ther ...
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Aubagne
Aubagne (, ''Aubanha'' in Occitan according to the classic norm or ''Aubagno'' according to the Mistralian norm) is a commune in the southern French department of Bouches-du-Rhône. In 2018, it had a population of 47,208. Its inhabitants are known as ''Aubagnais'' or ''Aubagnaises''. In 2020, the commune was awarded three flowers by the National Council of Towns and Villages in Bloom in the Competition of cities and villages in Bloom. Geography Aubagne is located in the Huveaune Valley and surrounded by the mountain ranges of Garlaban with Sainte-Baume to the north and east of Marseille. Aubagne was the main city of the former Agglomeration community of Pays d'Aubagne et de l'Étoile; it has been part of the Aix-Marseille-Provence Metropolis since 2016. It is the sixth largest city of Bouches-du-Rhône by population. It is the main producer of Santon figurines and also hosts many cultural events each year. The Foreign Legion has its headquarters in Aubagne. Public transport ...
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Acid-fast Bacilli
Acid-fastness is a physical property of certain bacterial and eukaryotic cells, as well as some sub-cellular structures, specifically their resistance to decolorization by acids during laboratory staining procedures. Once stained as part of a sample, these organisms can resist the acid and/or ethanol-based decolorization procedures common in many staining protocols, hence the name ''acid-fast''. The mechanisms of acid-fastness vary by species, although the most well-known example is in the genus ''Mycobacterium'', which includes the species responsible for tuberculosis and leprosy. The acid-fastness of ''Mycobacteria'' is due to the high mycolic acid content of their cell walls, which is responsible for the staining pattern of poor absorption followed by high retention. Some bacteria may also be partially acid-fast, such as '' Nocardia''. Acid-fast organisms are difficult to characterize using standard microbiological techniques, though they can be stained using concentrated dy ...
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Nontuberculous Mycobacteria
Nontuberculous mycobacteria (NTM), also known as environmental mycobacteria, atypical mycobacteria and mycobacteria other than tuberculosis (MOTT), are mycobacteria which do not cause tuberculosis or leprosy (also known as Hansen's disease). NTM do cause pulmonary diseases that resemble tuberculosis. Mycobacteriosis is any of these illnesses, usually meant to exclude tuberculosis. They occur in many animals, including humans and are commonly found in soil and water. Introduction Mycobacteria are a family of small, rod-shaped bacilli that can be classified into three main groups for the purpose of diagnosis and treatment: * ''Mycobacterium tuberculosis'' complex, which can cause tuberculosis: ''M. tuberculosis'', '' M. bovis'', '' M. africanum'', '' M. microti'' and '' M. canetti'' * ''M. leprae'' and '' M. lepromatosis'', which cause Hansen's disease, also called leprosy * Nontuberculous mycobacteria (NTM) are all the other mycobacteria that can cause pulmonary disease resembling ...
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Bacteria Described In 2006
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationships ...
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