Mucoromycotina Fine Root Endophytes
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Mucoromycotina Fine Root Endophytes
Mucoromycotina is a subphylum of uncertain placement in Fungi. It was considered part of the phylum Zygomycota, but recent phylogenetic studies have shown that it was polyphyletic and thus split into several groups, it is now thought to be a paraphyletic grouping. Mucoromycotina is currently composed of 3 orders, 61 genera, and 325 species. Some common characteristics seen throughout the species include: development of coenocytic mycelium, saprotrophic lifestyles, and filamentous. With the treatment of Tedersoo et al. 2018, Mucoromycotina is the only subphylum under Mucoromycota. It includes a diverse group of various molds, including the common bread molds ''Mucor'' and ''Rhizopus''. The other treatment of Mucoromycota is equivalent to current Mucoromyceta. History Zygomycete fungi were originally only ascribed to the phylum Zygomycota. Such classifications were based on physiological characteristics with little genetic support. A genetic study of Zygomycete fungi performed ...
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Mucoromycetes
The Mucorales is the largest and best-studied order of zygomycete fungi. Members of this order are sometimes called pin molds. The term mucormycosis is now preferred for infections caused by molds belonging to the order Mucorales. Systematics The order includes: 11 families, 56 genera, and approximately 300 species. Mucoralean classification has traditionally been based on morphological, developmental, and ecological characteristics. Recently, molecular data has revealed that some aspects of traditional classification are quite artificial. For example, the Mucoraceae is believed to be polyphyletic, as are the Thamnidiaceae, Chaetocladiaceae and Radiomycetaceae. Some of the genera, (including ''Mucor'', ''Absidia'' and '' Backusella'') appear to be polyphyletic. Today, the traditional system is still largely in use, as further studies are needed to reconcile morphological and molecular concepts of families and genera. Families The order consists of the following familie ...
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Entomophthoromycota
Entomophthoromycota is a division of kingdom fungi. In 2007, it was placed at the taxonomic rank of subphylum in the most recent revision of the entire fungus kingdom. In 2012, it was raised to the rank of phylum as "Entomophthoromycota" in a scientific paper by Richard A. Humber 2012. Divided into three classes and six families ( Ancylistaceae, Basidiobolaceae, Completoriaceae, Entomophthoraceae, Meristacraceae, and Neozygitaceae), it contains over 250 species that are mostly arthropod pathogens or soil- and litter-borne saprobes. Taxonomy Circumscribed by mycologist Richard Humber in 2012, it contains species formerly classified in the division Zygomycota. Humber's reorganization divides the division into three classes while retaining the previously defined family structure: Division Entomophthoromycota Humber 2012 ntomophthoromycotina Humber 2007:Class Neozygitomycetes Humber 2012 ::Order Neozygitales Humber 2012 :::Family Neozygitaceae Ben Ze’ev, Kenneth & Uzi ...
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Ectomycorrhizal
An ectomycorrhiza (from Greek ἐκτός ', "outside", μύκης ', "fungus", and ῥίζα ', "root"; ectomycorrhizas or ectomycorrhizae, abbreviated EcM) is a form of symbiotic relationship that occurs between a fungal symbiont, or mycobiont, and the roots of various plant species. The mycobiont is often from the phyla Basidiomycota and Ascomycota, and more rarely from the Zygomycota. Ectomycorrhizas form on the roots of around 2% of plant species, usually woody plants, including species from the birch, dipterocarp, myrtle, beech, willow, pine and rose families. Research on ectomycorrhizas is increasingly important in areas such as ecosystem management and restoration, forestry and agriculture. Unlike other mycorrhizal relationships, such as arbuscular mycorrhiza and ericoid mycorrhiza, ectomycorrhizal fungi do not penetrate their host's cell walls. Instead they form an entirely intercellular interface known as the Hartig net, consisting of highly branched hyphae forming ...
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Arbuscular Mycorrhizae
An arbuscular mycorrhiza (AM) (plural ''mycorrhizae'') is a type of mycorrhiza in which the symbiont fungus (''Arbuscular mycorrhizal fungi'', or AMF) penetrates the cortical cells of the roots of a vascular plant forming arbuscules. Arbuscular mycorrhiza is a type of endomycorrhiza along with ericoid mycorrhiza and orchid mycorrhiza (not to be confused with ectomycorrhiza). They are characterized by the formation of unique tree-like structures, the arbuscules. In addition, globular storage structures called vesicles are often encountered. Arbuscular mycorrhizae are formed by fungi in the subphylum Glomeromycotina. This subphylum, along with the Mortierellomycotina, and Mucoromycotina, form the phylum Mucoromycota, a sister clade of the more well-known and diverse dikaryan fungi. AM fungi help plants to capture nutrients such as phosphorus, sulfur, nitrogen and micronutrients from the soil. It is believed that the development of the arbuscular mycorrhizal symbiosis played a ...
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Mycorrhiza
A mycorrhiza (; , mycorrhiza, or mycorrhizas) is a symbiotic association between a fungus and a plant. The term mycorrhiza refers to the role of the fungus in the plant's rhizosphere, the plant root system and its surroundings. Mycorrhizae play important roles in plant nutrition, soil biology, and soil chemistry. In a mycorrhizal association, the fungus colonizes the host plant's root tissues, either intracellularly as in arbuscular mycorrhizal fungi, or extracellularly as in ectomycorrhizal fungi. The association is normally mutualistic. In particular species, or in particular circumstances, mycorrhizae may have a parasitic association with host plants. Definition A mycorrhiza is a symbiotic association between a green plant and a fungus. The plant makes organic molecules by photosynthesis and supplies them to the fungus in the form of sugars or lipids, while the fungus supplies the plant with water and mineral nutrients, such as phosphorus, taken from the soil. Myco ...
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Parasitism
Parasitism is a close relationship between species, where one organism, the parasite, lives (at least some of the time) on or inside another organism, the host, causing it some harm, and is adapted structurally to this way of life. The entomologist E. O. Wilson characterised parasites' way of feeding as "predators that eat prey in units of less than one". Parasites include single-celled protozoans such as the agents of malaria, sleeping sickness, and amoebic dysentery; animals such as hookworms, lice, mosquitoes, and vampire bats; fungi such as honey fungus and the agents of ringworm; and plants such as mistletoe, dodder, and the broomrapes. There are six major parasitic strategies of exploitation of animal hosts, namely parasitic castration, directly transmitted parasitism (by contact), trophicallytransmitted parasitism (by being eaten), vector-transmitted parasitism, parasitoidism, and micropredation. One major axis of classification concerns invasiveness: ...
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Saprotrophic Nutrition
Saprotrophic nutrition or lysotrophic nutrition is a process of chemoheterotrophic extracellular digestion involved in the processing of decayed (dead or waste) organic matter. It occurs in saprotrophs, and is most often associated with fungi (e.g. '' Mucor'') and with soil bacteria. Saprotrophic microscopic fungi are sometimes called saprobes. - "The word saprophyte and its derivatives, implying that a fungus is a plant, can be replaced by saprobe (σαπρός + βίος), which is without such implication." Saprotrophic plants or bacterial flora are called saprophytes ( ''sapro-'' 'rotten material' + ''-phyte'' 'plant'), although it is now believed that all plants previously thought to be saprotrophic are in fact parasites of microscopic fungi or of other plants. In fungi, the saprotrophic process is most often facilitated through the active transport of such materials through endocytosis within the internal mycelium and its constituent hyphae. states the purpose of sa ...
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Basidiomycota
Basidiomycota () is one of two large divisions that, together with the Ascomycota, constitute the subkingdom Dikarya (often referred to as the "higher fungi") within the kingdom Fungi. Members are known as basidiomycetes. More specifically, Basidiomycota includes these groups: agarics, puffballs, stinkhorns, bracket fungi, other polypores, jelly fungi, boletes, chanterelles, earth stars, smuts, bunts, rusts, mirror yeasts, and '' Cryptococcus'', the human pathogenic yeast. Basidiomycota are filamentous fungi composed of hyphae (except for basidiomycota-yeast) and reproduce sexually via the formation of specialized club-shaped end cells called basidia that normally bear external meiospores (usually four). These specialized spores are called basidiospores. However, some Basidiomycota are obligate asexual reproducers. Basidiomycota that reproduce asexually (discussed below) can typically be recognized as members of this division by gross similarity to others, by ...
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Ascomycota
Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The defining feature of this fungal group is the "ascus" (), a microscopic sexual reproduction, sexual structure in which nonmotile spores, called ascospores, are formed. However, some species of Ascomycota are Asexual reproduction, asexual and thus do not form asci or ascospores. Familiar examples of sac fungi include morels, truffles, yeast#Beer, brewers' and bakers' yeast, Xylaria, dead man's fingers, and cup fungi. The fungal symbionts in the majority of lichens (loosely termed "ascolichens") such as ''Cladonia'' belong to the Ascomycota. Ascomycota is a monophyletic group (containing all of the descendants of a common ancestor). Previously placed in the Basidiomycota along with asexual species from other fungal taxa, asexual (or Teleomorph, ...
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Dikarya
Dikarya is a subkingdom of Fungi that includes the divisions Ascomycota and Basidiomycota, both of which in general produce dikaryons, may be hypha, filamentous or unicellular, but are always without flagella. The Dikarya are most of the so-called "higher fungi", but also include many anamorphic species that would have been classified as Mold (fungus), molds in historical literature. Phylogenetically the two divisions regularly group together. In a 1998 publication, Thomas Cavalier-Smith referred to this group as the Neomycota. Phylogeny The 2007 classification of Kingdom Fungi is the result of a large-scale collaborative research effort involving dozens of mycologists and other scientists working on fungal Taxonomy (biology), taxonomy. It recognizes seven phylum, divisions within the Fungi, two of which—the Ascomycota and the Basidiomycota—are contained within a branch representing subkingdom Dikarya. The cladogram depicts the major fungal Taxon, taxa and their relationship ...
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Glomeromycota
Glomeromycota (often referred to as glomeromycetes, as they include only one class, Glomeromycetes) are one of eight currently recognized division (mycology), divisions within the Kingdom (biology), kingdom Fungi, with approximately 230 described species. Members of the Glomeromycota form arbuscular mycorrhizas (AMs) with the thalli of bryophytes and the roots of vascular plant, vascular land plants. Not all species have been shown to form AMs, and one, ''Geosiphon pyriformis'', is known not to do so. Instead, it forms an endocytobiotic association with ''Nostoc'' cyanobacterium, cyanobacteria. The majority of evidence shows that the Glomeromycota are dependent on land plants (''Nostoc'' in the case of ''Geosiphon'') for carbon and energy, but there is recent circumstantial evidence that some species may be able to lead an independent existence. The arbuscular mycorrhizal species are terrestrial and widely distributed in soils worldwide where they form symbioses with the roots of ...
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Kickxellomycotina
Kickxellomycotina is a fungus grouping in the subkingdom of Zoopagomyceta . The name was changed from "Harpellomycotina", because "Kickxellomycotina" had an older stem. It came from the genus '' Kickxella'', named after Jean Kickx. Orders include Asellariales, Kickxellales, Dimargaritales, and Harpellales. Taxonomy Taxonomy based on the work of Wijayawardene et al. 2019. Subphylum Kickxellomycotina Benny 2007 arpellomycotina Doweld 2014* Class Dimargaritomycetes Tedersoo et al. 2018 ** Order Ramicandelaberales Doweld 2014 *** Family Ramicandelaberaceae Doweld 2014 ** Order Dimargaritales Benjamin 1979 *** Family Spinaliaceae Doweld 2014 *** Family Dimargaritaceae Benjamin 1959 * Class Kickxellomycetes Tedersoo et al. 2018 ** Order Barbatosporales Doweld 2014 *** Family Barbatosporaceae Doweld 2014 ** Order Spiromycetales Doweld 2014 *** Family Spiromycetaceae Doweld 2014 ** Order Orphellales Valle et al. 2018 *** Family Orphellaceae Doweld 2014 ** Order Kic ...
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