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Mark A. O'Neill
Mark A. O'Neill (born 3 November 1959) is an English computational biologist with interests in artificial intelligence, systems biology, complex systems and image analysis. He is the creator and lead programmer on a number of computational projects including the Digital Automated Identification SYstem (DAISY) for automated species identification and PUPS P3, an organic computing environment for Linux. Education O'Neill was educated at The King's School, Grantham, Sheffield University and University College London. Research interests O'Neill's interests lie at the interface of biology and computing. He has worked in the areas of artificial life and biologically inspired computing. In particular, he has attempted to answer the question "can one create software agents which are capable of carrying a useful computational payload which respond to their environment with the flexibility of a living organism?" He has also investigated how computational methods may be used to analy ...
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Grantham
Grantham () is a market town and civil parish in the South Kesteven district of Lincolnshire, England, situated on the banks of the River Witham and bounded to the west by the A1 road (Great Britain), A1 road. It lies south of Lincoln, England, Lincoln and east of Nottingham. The population in 2016 was put at 44,580. The town is the largest settlement and the administrative centre of the South Kesteven District. Grantham was the birthplace of the UK Prime Minister Margaret Thatcher. Isaac Newton was educated at The King's School, Grantham, the King's School. The town was the workplace of the UK's first warranted female police officer, Edith Smith (police officer), Edith Smith in 1914. The UK's first running diesel engine was made there in 1892 and the first tractor in 1896. Thomas Paine worked there as an excise officer in the 1760s. The villages of Manthorpe, Grantham, Manthorpe, Great Gonerby, Barrowby, Londonthorpe and Harlaxton form outlying suburbs of the town. Etymology ...
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Organic Computing
Organic computing is computing that behaves and interacts with humans in an organic (model), organic manner. The term "organic" is used to describe the system's behavior, and does not imply that they are constructed from Organic matter, organic materials. It is based on the insight that we will soon be surrounded by large collections of autonomous robot, autonomous systems, which are equipped with sensors and actuators, aware of their environment, communicate freely, and organize themselves in order to perform the actions and services that seem to be required. The goal is to construct such systems as robust, safe, flexible, and trustworthy as possible. In particular, a strong orientation towards human needs as opposed to a pure implementation of the technologically possible seems absolutely central. In order to achieve these goals, our technical systems will have to act more independently, flexibly, and autonomously, i.e. they will have to exhibit lifelike properties. We call such ...
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Open-source Model
Open source is source code that is made freely available for possible modification and redistribution. Products include permission to use and view the source code, design documents, or content of the product. The open source model is a decentralized software development model that encourages open collaboration. A main principle of open source software development is peer production, with products such as source code, blueprints, and documentation freely available to the public. The open source movement in software began as a response to the limitations of proprietary code. The model is used for projects such as in open source appropriate technology, and open source drug discovery. Open source promotes universal access via an open-source or free license to a product's design or blueprint, and universal redistribution of that design or blueprint. Before the phrase ''open source'' became widely adopted, developers and producers used a variety of other terms, such as ''free software'' ...
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Internet
The Internet (or internet) is the Global network, global system of interconnected computer networks that uses the Internet protocol suite (TCP/IP) to communicate between networks and devices. It is a internetworking, network of networks that consists of Private network, private, public, academic, business, and government networks of local to global scope, linked by a broad array of electronic, Wireless network, wireless, and optical networking technologies. The Internet carries a vast range of information resources and services, such as the interlinked hypertext documents and Web application, applications of the World Wide Web (WWW), email, electronic mail, internet telephony, streaming media and file sharing. The origins of the Internet date back to research that enabled the time-sharing of computer resources, the development of packet switching in the 1960s and the design of computer networks for data communication. The set of rules (communication protocols) to enable i ...
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Social Networking
A social network is a social structure consisting of a set of social actors (such as individuals or organizations), networks of Dyad (sociology), dyadic ties, and other Social relation, social interactions between actors. The social network perspective provides a set of methods for analyzing the structure of whole social entities along with a variety of theories explaining the patterns observed in these structures. The study of these structures uses social network analysis to identify local and global patterns, locate influential entities, and examine dynamics of networks. For instance, social network analysis has been used in studying the spread of misinformation on social media platforms or analyzing the influence of key figures in social networks. Social networks and the analysis of them is an inherently Interdisciplinarity, interdisciplinary academic field which emerged from social psychology, sociology, statistics, and graph theory. Georg Simmel authored early structural th ...
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Ethology
Ethology is a branch of zoology that studies the behavior, behaviour of non-human animals. It has its scientific roots in the work of Charles Darwin and of American and German ornithology, ornithologists of the late 19th and early 20th century, including Charles Otis Whitman, Charles O. Whitman, Oskar Heinroth, and Wallace Craig. The modern discipline of ethology is generally considered to have begun during the 1930s with the work of the Dutch biologist Nikolaas Tinbergen and the Austrian biologists Konrad Lorenz and Karl von Frisch, the three winners of the 1973 Nobel Prize in Physiology or Medicine. Ethology combines laboratory and field science, with a strong relation to neuroanatomy, ecology, and evolutionary biology. Etymology The modern term ''ethology'' derives from the Greek language: wikt:ἦθος, ἦθος, ''ethos'' meaning "character" and , ''wikt:-logia, -logia'' meaning "the study of". The term was first popularized by the American entomologist William Mo ...
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Economies
An economy is an area of the production, distribution and trade, as well as consumption of goods and services. In general, it is defined as a social domain that emphasize the practices, discourses, and material expressions associated with the production, use, and management of resources. A given economy is a set of processes that involves its culture, values, education, technological evolution, history, social organization, political structure, legal systems, and natural resources as main factors. These factors give context, content, and set the conditions and parameters in which an economy functions. In other words, the economic domain is a social domain of interrelated human practices and transactions that does not stand alone. Economic agents can be individuals, businesses, organizations, or governments. Economic transactions occur when two groups or parties agree to the value or price of the transacted good or service, commonly expressed in a certain currency. However ...
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Ecosystem
An ecosystem (or ecological system) is a system formed by Organism, organisms in interaction with their Biophysical environment, environment. The Biotic material, biotic and abiotic components are linked together through nutrient cycles and energy flows. Ecosystems are controlled by external and internal Environmental factor, factors. External factors—including climate—control the ecosystem's structure, but are not influenced by it. By contrast, internal factors control and are controlled by ecosystem processes; these include decomposition, the types of species present, root competition, shading, disturbance, and succession. While external factors generally determine which Resource (biology), resource inputs an ecosystem has, their availability within the ecosystem is controlled by internal factors. Ecosystems are wikt:dynamic, dynamic, subject to periodic disturbances and always in the process of recovering from past disturbances. The tendency of an ecosystem to remain clo ...
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Organism
An organism is any life, living thing that functions as an individual. Such a definition raises more problems than it solves, not least because the concept of an individual is also difficult. Many criteria, few of them widely accepted, have been proposed to define what an organism is. Among the most common is that an organism has autonomous reproduction, Cell growth, growth, and metabolism. This would exclude viruses, despite the fact that they evolution, evolve like organisms. Other problematic cases include colonial organisms; a colony of eusocial insects is organised adaptively, and has Germ-Soma Differentiation, germ-soma specialisation, with some insects reproducing, others not, like cells in an animal's body. The body of a siphonophore, a jelly-like marine animal, is composed of organism-like zooids, but the whole structure looks and functions much like an animal such as a jellyfish, the parts collaborating to provide the functions of the colonial organism. The evolutiona ...
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Software Agents
In computer science, a software agent is a computer program that acts for a user or another program in a relationship of agency. The term ''agent'' is derived from the Latin ''agere'' (to do): an agreement to act on one's behalf. Such "action on behalf of" implies the authority to decide which, if any, action is appropriate. Some agents are colloquially known as ''bots'', from ''robot''. They may be embodied, as when execution is paired with a robot body, or as software such as a chatbot executing on a computer, such as a mobile device, e.g. Siri. Software agents may be autonomous or work together with other agents or people. Software agents interacting with people (e.g. chatbots, human-robot interaction environments) may possess human-like qualities such as natural language understanding and speech, personality or embody humanoid form (see Asimo). Related and derived concepts include ''intelligent agents'' (in particular exhibiting some aspects of artificial intelligence, such ...
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Biologically Inspired Computing
Bio-inspired computing, short for biologically inspired computing, is a field of study which seeks to solve computer science problems using models of biology. It relates to connectionism, social behavior, and emergence. Within computer science, bio-inspired computing relates to artificial intelligence and machine learning. Bio-inspired computing is a major subset of natural computation. History Early Ideas The ideas behind biological computing trace back to 1936 and the first description of an abstract computer, which is now known as a Turing machine. Turing firstly described the abstract construct using a biological specimen. Turing imagined a mathematician that has three important attributes. He always has a pencil with an eraser, an unlimited number of papers and a working set of eyes. The eyes allow the mathematician to see and perceive any symbols written on the paper while the pencil allows him to write and erase any symbols that he wants. Lastly, the unlimited paper al ...
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Artificial Life
Artificial life (ALife or A-Life) is a field of study wherein researchers examine systems related to natural life, its processes, and its evolution, through the use of simulations with computer models, robotics, and biochemistry. The discipline was named by Christopher Langton, an American computer scientist, in 1986. In 1987, Langton organized the first conference on the field, in Los Alamos, New Mexico. There are three main kinds of alife, named for their approaches: ''soft'', from software; ''hard'', from computer hardware, hardware; and ''wet artificial life, wet'', from biochemistry. Artificial life researchers study traditional biology by trying to recreate aspects of biological phenomena. Overview Artificial life studies the fundamental processes of living systems in artificial environments in order to gain a deeper understanding of the complex information processing that define such systems. These topics are broad, but often include Evolutionary algorithm, evolutionar ...
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