Hadal Zone Microbial Communities
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Hadal Zone Microbial Communities
Hadal zone microbial communities are the groups of microorganisms which reside within hadal zones, which consist of many individual deep oceanic trenches found around the world. The environmental conditions of the trench environments select for the microbe communities. Generally, the environmental properties of the hadal zone are similar to the abyssal; temperature varies between different trenches, as do salinity and nutrients. A unique characteristic of these hadal zones is the large abundance and accumulation of particulate organic matter in these trenches. These high concentrations correspond directly to high microbial productivity. The physical bathymetry of the trenches is also critical to understandings of microbial communities as this influences the distribution of organic matter. Microbes play a great role in the cycling of this organic matter and other nutrients within the hadal zone. Hadal zone microbial communities are highly diverse, and include bacteria, archaea as w ...
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Abyssal Zone
The abyssal zone or abyssopelagic zone is a layer of the pelagic zone of the ocean. The word ''abyss'' comes from the Greek word (), meaning "bottomless". At depths of , this zone remains in perpetual darkness. It covers 83% of the total area of the ocean and 60% of Earth's surface. The abyssal zone has temperatures around through the large majority of its mass. The water pressure can reach up to . As there is no light, photosynthesis cannot occur, and there are no plants producing molecular oxygen (O2), which instead primarily comes from ice that had melted long ago from the polar regions. The water along the seafloor of this zone is largely devoid of molecular oxygen, resulting in a death trap for organisms unable to quickly return to the oxygen-enriched water above or to survive in the low-oxygen environment. This region also contains a much higher concentration of nutrient salts, like nitrogen, phosphorus, and silica, due to the large amount of dead organic material t ...
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Sulfur Cycle
The sulfur cycle is a biogeochemical cycle in which the sulfur moves between rocks, waterways and living systems. It is important in geology as it affects many minerals and in life because sulfur is an essential element (CHNOPS), being a constituent of many proteins and cofactor (biochemistry), cofactors, and sulfur compounds can be used as oxidants or reductants in microbial respiration. The global sulfur cycle involves the transformations of sulfur species through different oxidation states, which play an important role in both geological and biological processes. Steps of the sulfur cycle are: * Mineralization of Organosulfur compounds, organic sulfur into inorganic forms, such as hydrogen sulfide (H2S), elemental sulfur, as well as sulfide minerals. * Oxidation of hydrogen sulfide, sulfide, and elemental sulfur (S) to sulfate (). * Reduction of sulfate to sulfide. * Incorporation of sulfide into organic compounds (including metal-containing derivatives). * Disproportionation ...
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Nitrifying Bacteria
Nitrifying bacteria are chemolithotrophic organisms that include species of genera such as '' Nitrosomonas'', '' Nitrosococcus'', '' Nitrobacter'', '' Nitrospina'', '' Nitrospira'' and '' Nitrococcus''. These bacteria get their energy from the oxidation of inorganic nitrogen compounds. Types include ammonia-oxidizing bacteria (AOB) and nitrite-oxidizing bacteria (NOB). Many species of nitrifying bacteria have complex internal membrane systems that are the location for key enzymes in nitrification: ammonia monooxygenase (which oxidizes ammonia to hydroxylamine), hydroxylamine oxidoreductase (which oxidizes hydroxylamine to nitric oxide - which is further oxidized to nitrite by a currently unidentified enzyme), and nitrite oxidoreductase (which oxidizes nitrite to nitrate). Ecology Nitrifying bacteria are present in distinct taxonomical groups and are found in highest numbers where considerable amounts of ammonia are present (such as areas with extensive protein decomposition ...
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New Britain Trench
The New Britain Trench (also known as Bougainville-New Britain Trench or New Britain-Solomon Trench) has formed due to subduction of the floor of the Solomon Sea and has some of the highest current seismic activity in the world. The trench was discovered by the German research vessel SMS Planet, in 1910. Geography The trench is long, curved around the south of New Britain and west of Bougainville Island in the northern Solomon Sea. The deepest point is the Planet Deep at . Tectonics The New Britain subduction zone is a continuum with the Vanuatu subduction zone and are all cases of subduction polarity reversal as originally the Pacific Plate subducted under the Indo-Australian Plate's minor plates such as the North Bismarck Plate. However now minor plate subduction is associated with the Australian Plate subducting under the Pacific Plate. In this case it is the Solomon Sea Plate and Trobriand Plate subducting under the South Bismarck Plate. It is possible that the ...
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Isotopes Of Carbon
Carbon (6C) has 14 known isotopes, from to as well as , of which only and are stable. The longest-lived radioisotope is , with a half-life of years. This is also the only carbon radioisotope found in nature, as trace quantities are formed cosmogenically by the reaction + → + . The most stable artificial radioisotope is , which has a half-life of . All other radioisotopes have half-lives under 20 seconds, most less than 200 milliseconds. The least stable isotope is , with a half-life of . Light isotopes tend to decay into isotopes of boron and heavy ones tend to decay into isotopes of nitrogen. List of isotopes , -id=Carbon-8 , , style="text-align:right" , 6 , style="text-align:right" , 2 , , [] , proton emission, 2p , Also immediately emits two protons for the net reaction of → + 4  , 0+ , , , -id=Carbon-9 , rowspan=3, , rowspan=3 style="text-align:right" , 6 , rowspan=3 style="text-align:right" , 3 , rowspan=3, , rowspan=3, , ...
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Kermadec Trench
The Kermadec Trench is a linear ocean trench in the south Pacific Ocean. It stretches about from the Louisville Seamount Chain in the north (26°S) to the Hikurangi Plateau in the south (37°S), north-east of New Zealand's North Island. Together with the Tonga Trench to the north, it forms the -long, near-linear Kermadec-Tonga subduction system, which began to evolve in the Eocene when the Pacific plate started to subduct beneath the Australian plate. Convergence rates along this subduction system are among the fastest on Earth, /yr in the north and /yr in the south. Geology The Kermadec Trench is one of Earth's deepest oceanic trenches, reaching a depth of . Formed by the subduction of the Pacific plate under the Indo-Australian plate, it runs parallel with and to the east of the Kermadec Ridge and island arc. The Tonga Trench marks the continuation of subduction to the north. The Kermadec Trench has a southern continuation in the turbidite-filled Hikurangi Trough, but ...
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Remineralisation
In biogeochemistry, remineralisation (or remineralization) refers to the breakdown or transformation of organic matter (those molecules derived from a biological source) into its simplest inorganic forms. These transformations form a crucial link within ecosystems as they are responsible for liberating the energy stored in organic molecules and recycling matter within the system to be reused as nutrients by other organisms. Remineralisation is normally viewed as it relates to the cycling of the major biologically important elements such as carbon, nitrogen and phosphorus. While crucial to all ecosystems, the process receives special consideration in aquatic settings, where it forms a significant link in the biogeochemical dynamics and cycling of aquatic ecosystems. Role in biogeochemistry The term "remineralization" is used in several contexts across different disciplines. The term is most commonly used in the medicinal and physiological fields, where it describes the dev ...
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Chemosynthesis
In biochemistry, chemosynthesis is the biological conversion of one or more carbon-containing molecules (usually carbon dioxide or methane) and nutrients into organic matter using the oxidation of inorganic compounds (e.g., hydrogen gas, hydrogen sulfide) or ferrous ions as a source of energy, rather than sunlight, as in photosynthesis. Chemotroph, Chemoautotrophs, organisms that obtain carbon from carbon dioxide through chemosynthesis, are phylogenetically diverse. Groups that include conspicuous or biogeochemically important taxa include the sulfur-oxidizing Gammaproteobacteria, the Campylobacterota, the Aquificota, the methanogenic archaea, and the neutrophilic iron-oxidizing bacteria. Many microorganisms in dark regions of the oceans use chemosynthesis to produce biomass from single-carbon molecules. Two categories can be distinguished. In the rare sites where hydrogen molecules (H2) are available, the energy available from the reaction between CO2 and H2 (leading to product ...
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Diagenesis
Diagenesis () is the process of physical and chemical changes in sediments first caused by water-rock interactions, microbial activity, and compaction after their deposition. Increased pressure and temperature only start to play a role as sediments become buried much deeper in the Earth's crust. In the early stages, the transformation of poorly consolidated sediments into sedimentary rock (lithification) is simply accompanied by a reduction in porosity and water expulsion (clay sediments), while their main mineralogical assemblages remain unaltered. As the rock is carried deeper by further deposition above, its organic content is progressively transformed into kerogens and bitumens. The process of diagenesis excludes surface alteration (weathering) and deep metamorphism. There is no sharp boundary between diagenesis and metamorphism, but the latter occurs at higher temperatures and pressures. Hydrothermal solutions, meteoric groundwater, rock porosity, permeability, dissolu ...
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Chlorophyll A
} Chlorophyll ''a'' is a specific form of chlorophyll used in oxygenic photosynthesis. It absorbs most energy from wavelengths of violet-blue and orange-red light, and it is a poor absorber of green and near-green portions of the spectrum. Chlorophyll does not reflect light but chlorophyll-containing tissues appear green because green light is diffusively reflected by structures like cell walls. This photosynthetic pigment is essential for photosynthesis in eukaryotes, cyanobacteria and prochlorophytes because of its role as primary electron donor in the electron transport chain. Chlorophyll ''a'' also transfers resonance energy in the antenna complex, ending in the reaction center where specific chlorophylls P680 and P700 are located. Distribution of chlorophyll ''a'' Chlorophyll ''a'' is essential for most photosynthetic organisms to release chemical energy but is not the only pigment that can be used for photosynthesis. All oxygenic photosynthetic organisms use chloroph ...
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Atacama Trench
The Atacama Desert () is a desert plateau located on the Pacific coast of South America, in the north of Chile. Stretching over a strip of land west of the Andes Mountains, it covers an area of , which increases to if the barren lower slopes of the Andes are included. The Atacama Desert is the driest nonpolar desert in the world, and the second driest overall, behind some specific spots within the McMurdo Dry Valleys. It is the only true desert to receive less precipitation than polar deserts, and the largest fog desert in the world. The area has been used as an experimentation site for Mars expedition simulations due to its similarities to the Martian environment. The constant temperature inversion caused by the cool north-flowing Humboldt ocean current and the strong Pacific anticyclone contribute to the extreme aridity of the desert. The most arid region of the Atacama Desert is situated between two mountain chains, the Andes and the Chilean Coast Range, which are high ...
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