Flavobacteriia Forming Biofilms
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Flavobacteriia Forming Biofilms
The class Flavobacteriia is composed of a single class of environmental bacteria. It contains the family Flavobacteriaceae, which is the largest family in the phylum Bacteroidota. This class is widely distributed in soil, fresh, and seawater habitats. The name is often spelt Flavobacteria, but was officially named Flavobacteriia in 2012. Flavobacteriia are gram-negative aerobic rods, 2–5 μm long, 0.1–0.5 μm wide, with rounded or tapered ends. They form circular cream to orange coloured colonies on agar, and are typically simple to successfully culture. Flavobacteriia is a chemoorganotroph and are known for their ability to mineralize or degrade dissolved organic matter of high molecular weight and particulate plant material. Flavobacteriia have impacts on both the environment and human society, as they are able to cause diseases in many organisms. They are important in the decomposition of organic matter and pollutants, and are key members in the formation of marine ...
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Elizabethkingia Meningoseptica
''Elizabethkingia meningoseptica'' is a Gram-negative, rod-shaped bacterium widely distributed in nature (e.g. fresh water, salt water, or soil). It may be normally present in fish and frogs; it may be isolated from chronic infectious states, as in the sputum of cystic fibrosis patients. In 1959, American bacteriologist Elizabeth O. King (who isolated '' Kingella kingae'' in 1960) was studying unclassified bacteria associated with pediatric meningitis at the Centers for Disease Control and Prevention in Atlanta, when she isolated an organism (CDC group IIa) that she named ''Flavobacterium meningosepticum'' (''Flavobacterium'' means "the yellow bacillus" in Latin; ''meningosepticum'' likewise means "associated with meningitis and sepsis"). In 1994, it was reclassified in the genus ''Chryseobacterium'' and renamed ''Chryseobacterium meningosepticum''(''chryseos'' = "golden" in Greek, so ''Chryseobacterium'' means a golden/yellow rod similar to ''Flavobacterium''). In 2005, a 16S r ...
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Schleiferiaceae
''Schleiferiaceae'' is a family of bacteria in the order ''Flavobacteriales The order Flavobacteriales comprises several families of environmental bacteria. Comparative genomics and molecular signatures ''Flavobacteriales'' is of one of the orders from the phylum ''Bacteroidota''. Comparative genomic studies have ident ...''. References Flavobacteria Bacteria families {{Flavobacteria-stub ...
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Genome Size
Genome size is the total amount of DNA contained within one copy of a single complete genome. It is typically measured in terms of mass in picograms (trillionths or 10−12 of a gram, abbreviated pg) or less frequently in daltons, or as the total number of nucleotide base pairs, usually in megabases (millions of base pairs, abbreviated Mb or Mbp). One picogram is equal to 978 megabases. In diploid organisms, genome size is often used interchangeably with the term C-value. An organism's complexity is not directly proportional to its genome size; total DNA content is widely variable between biological taxa. Some single-celled organisms have much more DNA than humans, for reasons that remain unclear (see Junk DNA and C-value). Variation in genome size and gene content Since the 1950s, with the emergence of various molecular techniques, the genome sizes of thousands of eukaryotes have been analyzed, and these data are available in online databases for animals, plants, and fung ...
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Bergeyella Zoohelcum 2
''Bergeyella'' is a rod-shaped, Gram-negative, aerobic, non-spore-forming and non-motile genus from the family of Weeksellaceae ''Weeksellaceae'' is a family in the order Flavobacteriales. It was proposed to be split from the Flavobacteriaceae in 2019, based on phylogenetic analysis. Genera The family ''Weeksellaceae'' comprises the following genera: * '' Algoriella'' Y .... References Further reading * * * * Flavobacteria Bacteria genera {{Flavobacteria-stub ...
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Biofilm
A biofilm is a Syntrophy, syntrophic Microbial consortium, community of microorganisms in which cell (biology), cells cell adhesion, stick to each other and often also to a surface. These adherent cells become embedded within a slimy extracellular matrix that is composed of extracellular polymeric substances (EPSs). The cells within the biofilm produce the EPS components, which are typically a polymeric combination of extracellular polysaccharides, proteins, lipids and DNA. Because they have a three-dimensional structure and represent a community lifestyle for microorganisms, they have been metaphorically described as "cities for microbes". Biofilms may form on living (biotic) or non-living (abiotic) surfaces and can be common in natural, industrial, and hospital settings. They may constitute a microbiome or be a portion of it. The microbial cells growing in a biofilm are physiology, physiologically distinct from planktonic cells of the same organism, which, by contrast, ...
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Upwelling
Upwelling is an physical oceanography, oceanographic phenomenon that involves wind-driven motion of dense, cooler, and usually nutrient-rich water from deep water towards the ocean surface. It replaces the warmer and usually nutrient-depleted surface water. The nutrient-rich upwelled water stimulates the growth and reproduction of primary producers such as phytoplankton. The biomass of phytoplankton and the presence of cool water in those regions allow upwelling zones to be identified by cool sea surface temperatures (SST) and high concentrations of chlorophyll a. The increased availability of nutrients in upwelling regions results in high levels of primary production and thus fishery production. Approximately 25% of the total global marine fish catches come from five upwellings, which occupy only 5% of the total ocean area.Jennings, S., Kaiser, M.J., Reynolds, J.D. (2001) "Marine Fisheries Ecology." Oxford: Blackwell Science Ltd. Upwellings that are driven by coastal ocean curr ...
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Phytoplankton Bloom
Phytoplankton () are the autotrophic (self-feeding) components of the plankton community and a key part of ocean and freshwater ecosystems. The name comes from the Greek words (), meaning 'plant', and (), meaning 'wanderer' or 'drifter'. Phytoplankton obtain their energy through photosynthesis, as trees and other plants do on land. This means phytoplankton must have light from the sun, so they live in the well-lit surface layers ( euphotic zone) of oceans and lakes. In comparison with terrestrial plants, phytoplankton are distributed over a larger surface area, are exposed to less seasonal variation and have markedly faster turnover rates than trees (days versus decades). As a result, phytoplankton respond rapidly on a global scale to climate variations. Phytoplankton form the base of marine and freshwater food webs and are key players in the global carbon cycle. They account for about half of global photosynthetic activity and at least half of the oxygen production, despite a ...
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Photic Zone
The photic zone (or euphotic zone, epipelagic zone, or sunlight zone) is the uppermost layer of a body of water that receives sunlight, allowing phytoplankton to perform photosynthesis. It undergoes a series of physical, chemical, and biological processes that supply nutrients into the upper water column. The photic zone is home to the majority of Aquatic ecosystem, aquatic life due to the activity (Marine primary production, primary production) of the phytoplankton. The thicknesses of the photic and euphotic zones vary with the intensity of sunlight as a function of season and latitude and with the degree of water turbidity. The bottommost, or aphotic, zone is the region of perpetual darkness that lies beneath the photic zone and includes most of the ocean waters. Photosynthesis in photic zone In the photic zone, the photosynthesis rate exceeds the respiration rate. This is due to the abundant solar energy which is used as an energy source for photosynthesis by primary produce ...
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Brine
Brine (or briny water) is a high-concentration solution of salt (typically sodium chloride or calcium chloride) in water. In diverse contexts, ''brine'' may refer to the salt solutions ranging from about 3.5% (a typical concentration of seawater, on the lower end of that of solutions used for brining foods) up to about 26% (a typical saturated solution, depending on temperature). Brine forms naturally due to evaporation of ground saline water but it is also generated in the mining of sodium chloride. Brine is used for food processing and cooking (pickling and brining), for de-icing of roads and other structures, and in a number of technological processes. It is also a by-product of many industrial processes, such as desalination, so it requires wastewater treatment for proper disposal or further utilization (fresh water recovery). In nature Brines are produced in multiple ways in nature. Modification of seawater via evaporation results in the concentration of salts in th ...
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Flavobacteriia Forming Biofilms
The class Flavobacteriia is composed of a single class of environmental bacteria. It contains the family Flavobacteriaceae, which is the largest family in the phylum Bacteroidota. This class is widely distributed in soil, fresh, and seawater habitats. The name is often spelt Flavobacteria, but was officially named Flavobacteriia in 2012. Flavobacteriia are gram-negative aerobic rods, 2–5 μm long, 0.1–0.5 μm wide, with rounded or tapered ends. They form circular cream to orange coloured colonies on agar, and are typically simple to successfully culture. Flavobacteriia is a chemoorganotroph and are known for their ability to mineralize or degrade dissolved organic matter of high molecular weight and particulate plant material. Flavobacteriia have impacts on both the environment and human society, as they are able to cause diseases in many organisms. They are important in the decomposition of organic matter and pollutants, and are key members in the formation of marine ...
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Myxobacteria
The myxobacteria ("slime bacteria") are a group of bacteria that predominantly live in the soil and feed on insoluble organic substances. The myxobacteria have very large genomes relative to other bacteria, e.g. 9–10 million nucleotides except for '' Anaeromyxobacter'' and ''Vulgatibacter''. One species of myxobacteria, ''Minicystis rosea'', has the largest known bacterial genome with over 16 million nucleotides. The second largest is another myxobacteria '' Sorangium cellulosum''. Myxobacteria can move by gliding. They typically travel in '' swarms'' (also known as ''wolf packs''), containing many cells kept together by intercellular molecular signals. Individuals benefit from aggregation as it allows accumulation of the extracellular enzymes that are used to digest food; this in turn increases feeding efficiency. Myxobacteria produce a number of biomedically and industrially useful chemicals, such as antibiotics, and export those chemicals outside the cell. Myxobacteria a ...
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Columnaris
Columnaris (also referred to as cottonmouth and saddle-back disease) is a disease in fish which results from an infection caused by the Gram-negative, aerobic, rod-shaped bacterium '' Flavobacterium columnare''. It was previously known as ''Bacillus columnaris, Chondrococcus columnaris, Cytophaga columnaris'' and ''Flexibacter columnaris''. The bacteria are ubiquitous in fresh water, and cultured fish reared in ponds or raceways are the primary concern – with disease most prevalent in air temperatures above 12–14 °C. Due to the appearance of bacterial clumps, it can be mistaken for a fungal infection. The disease is highly contagious, and the outcome is commonly fatal. It is not zoonotic. Causes Columnaris disease occurs in both wild and farmed freshwater fish and is caused by the bacteria ''F. columnare''. The age of an infected fish impacts the course of the infection. The bacteria usually enter fish through gills, mouth, or small wounds, and is prevalent where high b ...
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