Escherichia Virus ECML4
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Escherichia Virus ECML4
''Escherichia'' ( ) is a genus of Gram-negative, non-spore-forming, facultatively anaerobic, rod-shaped bacteria from the family Enterobacteriaceae. In those species which are inhabitants of the gastrointestinal tracts of warm-blooded animals, ''Escherichia'' species provide a portion of the microbially derived vitamin K for their host. A number of the species of ''Escherichia'' are pathogenic. The genus is named after Theodor Escherich, the discoverer of ''Escherichia coli''. ''Escherichia'' are facultative aerobes, with both aerobic and anaerobic growth, and an optimum temperature of 37 °C. ''Escherichia'' are usually motile by flagella, produce gas from fermentable carbohydrates, and do not decarboxylate lysine or hydrolyze arginine. Species include '' E. albertii'', '' E. fergusonii'', '' E. hermannii'', '' E. ruysiae'', '' E. marmotae'' and most notably, the model organism and clinically relevant ''E. coli''. Formerly, ''Shimwellia blattae'' and Pseudescherichia vulneris ...
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Scanning Electron Microscope
A scanning electron microscope (SEM) is a type of electron microscope that produces images of a sample by scanning the surface with a focused beam of electrons. The electrons interact with atoms in the sample, producing various signals that contain information about the surface topography and composition. The electron beam is scanned in a raster scan pattern, and the position of the beam is combined with the intensity of the detected signal to produce an image. In the most common SEM mode, secondary electrons emitted by atoms excited by the electron beam are detected using a secondary electron detector ( Everhart–Thornley detector). The number of secondary electrons that can be detected, and thus the signal intensity, depends, among other things, on specimen topography. Some SEMs can achieve resolutions better than 1 nanometer. Specimens are observed in high vacuum in a conventional SEM, or in low vacuum or wet conditions in a variable pressure or environmental SEM, an ...
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Warm-blooded
Warm-blooded is a term referring to animal species whose bodies maintain a temperature higher than that of their environment. In particular, homeothermic species (including birds and mammals) maintain a stable body temperature by regulating metabolic processes. Other species have various degrees of thermoregulation. Because there are more than two categories of temperature control utilized by animals, the terms ''warm-blooded'' and '' cold-blooded'' have been deprecated in the scientific field. Terminology In general, warm-bloodedness refers to three separate categories of thermoregulation. * Endothermy is the ability of some creatures to control their body temperatures through internal means such as muscle shivering or increasing their metabolism. The opposite of endothermy is ectothermy. * Homeothermy maintains a stable internal body temperature regardless of external influence and temperatures. The stable internal temperature is often higher than the immediate environme ...
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Diarrhea
Diarrhea (American English), also spelled diarrhoea or diarrhœa (British English), is the condition of having at least three loose, liquid, or watery bowel movements in a day. It often lasts for a few days and can result in dehydration due to fluid loss. Signs of dehydration often begin with loss of the normal stretchiness of the skin and irritable behaviour. This can progress to decreased urination, loss of skin color, a fast heart rate, and a decrease in responsiveness as it becomes more severe. Loose but non-watery stools in babies who are exclusively breastfed, however, are normal. What is diarrhea? How is it caused, treated and prevented? (see also script)The most common cause is an infection of the intestines due to a virus, bacterium, or parasite—a condition also known as gastroenteritis. These infections are often acquired from food or water that has been contaminated by feces, or directly from another person who is infected. The three types of diarrhea ...
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Urinary Tract Infection
A urinary tract infection (UTI) is an infection that affects a part of the urinary tract. Lower urinary tract infections may involve the bladder (cystitis) or urethra (urethritis) while upper urinary tract infections affect the kidney (pyelonephritis). Symptoms from a lower urinary tract infection include suprapubic pain, painful urination (dysuria), frequency and urgency of urination despite having an empty bladder. Symptoms of a kidney infection, on the other hand, are more systemic and include fever or Abdominal pain, flank pain usually in addition to the symptoms of a lower UTI. Rarely, the urine may appear Hematuria, bloody. Symptoms may be vague or non-specific at the extremities of age (i.e. in patients who are very young or old). The most common cause of infection is ''Escherichia coli'', though other bacteria or fungi may sometimes be the cause. Risk factors include female anatomy, sexual intercourse, diabetes mellitus, diabetes, obesity, catheterisation, and famil ...
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Pathogenic Escherichia Coli
''Escherichia coli'' ( ; commonly abbreviated ''E. coli'') is a gram-negative, Bacillus (shape), rod-shaped bacterium that is commonly found in the lower gastrointestinal tract, intestine of warm-blooded organisms (endotherms). Most ''E. coli'' Strain (biology), strains are harmless, but pathogenic varieties cause serious Foodborne illness, food poisoning, septic shock, meningitis, or urinary tract infections in humans. Unlike normal flora ''E. coli'', the pathogenic varieties produce toxins and other virulence factors that enable them to reside in parts of the body normally not inhabited by ''E. coli'', and to damage host cells. These pathogenic traits are encoded by virulence genes carried only by the pathogens. Introduction ''E. coli'' and related bacteria constitute about 0.1% of gut flora, and fecal–oral route, fecal–oral transmission is the major route through which pathogenic strains of the bacterium cause disease. Cells are able to survive outside the body for onl ...
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Gut Flora
Gut microbiota, gut microbiome, or gut flora are the microorganisms, including bacteria, archaea, fungi, and viruses, that live in the digestive tracts of animals. The gastrointestinal metagenome is the aggregate of all the genomes of the gut microbiota. The gut is the main location of the human microbiome. The gut microbiota has broad impacts, including effects on colonization, resistance to pathogens, maintaining the intestinal epithelium, metabolizing dietary and pharmaceutical compounds, controlling immune function, and even behavior through the gut–brain axis. The microbial composition of the gut microbiota varies across regions of the digestive tract. The colon contains the highest microbial density of any human-associated microbial community studied so far, representing between 300 and 1000 different species. Bacteria are the largest and to date, best studied component and 99% of gut bacteria come from about 30 or 40 species. About 55% of the dry mass of feces ...
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Pseudescherichia Vulneris
''Pseudescherichia vulneris'' is a Gram-negative bacterial species. ''P. vulneris'' is a fermentative, oxidase-negative, motile rod, which holds characteristics of the family Enterobacteraceae. This bacterium can colonize in the respiratory tract, genital tract, stool, and urinary tract. However, ''P. vulneris'' is most often associated with wounds and has been known to colonize open wounds of both humans and animals. This association gave the bacterium its species name, ''vulneris'', which is Latin for wound. It has also been infrequently reported in cases of meningitis. It was identified as ''Escherichia vulneris'' in 1982 with a 2017 genomic analysis of its original genus resulting in the creation of its new genus ''Pseudescherichia''. Morphology ''P. vulneris'' has a rod-like (bacilli) shape, and it achieves motility using peritrichous flagella (covering the whole body of the bacteria). ''P. vulneris'' is facultatively anaerobic, and is not spore-forming. Optimal growth occu ...
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Shimwellia Blattae
''Shimwellia blattae'' (formerly ''Escherichia blattae'') is a species of bacterium, one of two in the genus '' Shimwellia''. It is an aerobic enteric bacterium first isolated from the hindgut of cockroaches. Although it is related to human pathogens, including ''Escherichia coli'', ''S. blattae'' is not pathogenic to humans. It is notable for its ability to synthesize vitamin B12 ''de novo''. History and taxonomy The bacterium was first described in 1973 under the name ''Escherichia blattae'' after isolation from the hindgut of the cockroach species '' Blatta orientalis''. It was reclassified in the genus '' Shimwellia'' based on phylogenetic analyses of its genome sequence. Genome The genome of ''S. blattae'' is about 4.2 megabases in size, slightly smaller than similar enteric bacteria found in humans. It has 56.5% GC content, significantly higher than '' E. coli''. Genomic analysis suggests that the ability of ''S. blattae'' to synthesize vitamin B12 has its origins in ho ...
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Model Organism
A model organism is a non-human species that is extensively studied to understand particular biological phenomena, with the expectation that discoveries made in the model organism will provide insight into the workings of other organisms. Model organisms are widely used to research human disease when human experimentation would be unfeasible or unethical. This strategy is made possible by the common descent of all living organisms, and the conservation of metabolic and developmental pathways and genetic material over the course of evolution. Research using animal models has been central to most of the achievements of modern medicine. It has contributed most of the basic knowledge in fields such as human physiology and biochemistry, and has played significant roles in fields such as neuroscience and infectious disease. The results have included the near- eradication of polio and the development of organ transplantation, and have benefited both humans and animals. From 19 ...
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Arginine
Arginine is the amino acid with the formula (H2N)(HN)CN(H)(CH2)3CH(NH2)CO2H. The molecule features a guanidinium, guanidino group appended to a standard amino acid framework. At physiological pH, the carboxylic acid is deprotonated (−CO2−) and both the amino and guanidino groups are protonated, resulting in a cation. Only the -arginine (symbol Arg or R) enantiomer is found naturally. Arg residues are common components of proteins. It is Genetic code, encoded by the DNA codon table, codons CGU, CGC, CGA, CGG, AGA, and AGG. The guanidine group in arginine is the Precursor (chemistry), precursor for the biosynthesis of nitric oxide. Like all amino acids, it is a white, water-soluble solid. The one-letter symbol R was assigned to arginine for its phonetic similarity. History Arginine was first isolated in 1886 from Lupinus luteus, yellow lupin seedlings by the German chemist Ernst Schulze (chemist), Ernst Schulze and his assistant Ernst Steiger. He named it from the Greek ''árg ...
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Lysine
Lysine (symbol Lys or K) is an α-amino acid that is a precursor to many proteins. Lysine contains an α-amino group (which is in the protonated form when the lysine is dissolved in water at physiological pH), an α-carboxylic acid group (which is in the deprotonated form when the lysine is dissolved in water at physiological pH), and a side chain (which is partially protonated when the lysine is dissolved in water at physiological pH), and so it is classified as a basic, charged (in water at physiological pH), aliphatic amino acid. It is encoded by the codons AAA and AAG. Like almost all other amino acids, the α-carbon is chiral and lysine may refer to either enantiomer or a racemic mixture of both. For the purpose of this article, lysine will refer to the biologically active enantiomer L-lysine, where the α-carbon is in the ''S'' configuration. The human body cannot synthesize lysine. It is essential in humans and must therefore be obtained from the diet. In orga ...
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Flagellum
A flagellum (; : flagella) (Latin for 'whip' or 'scourge') is a hair-like appendage that protrudes from certain plant and animal sperm cells, from fungal spores ( zoospores), and from a wide range of microorganisms to provide motility. Many protists with flagella are known as flagellates. A microorganism may have from one to many flagella. A gram-negative bacterium '' Helicobacter pylori'', for example, uses its flagella to propel itself through the stomach to reach the mucous lining where it may colonise the epithelium and potentially cause gastritis, and ulcers – a risk factor for stomach cancer. In some swarming bacteria, the flagellum can also function as a sensory organelle, being sensitive to wetness outside the cell. Across the three domains of Bacteria, Archaea, and Eukaryota, the flagellum has a different structure, protein composition, and mechanism of propulsion but shares the same function of providing motility. The Latin word means " whip" to describe its ...
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