Thalassiosirales
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Thalassiosirales
''Thalassiosirales'' is an order of centric diatoms. As of 2015, the order contained 471 species. Species in the order Thalassiosirales are common in brackish, nearshore, and open-ocean habitats, with approximately the same number of freshwater and marine species. The Thalassiosirales species ''Thalassiosira pseudonana'' was chosen as the first eukaryotic marine phytoplankton for whole genome sequencing Whole genome sequencing (WGS), also known as full genome sequencing or just genome sequencing, is the process of determining the entirety of the DNA sequence of an organism's genome at a single time. This entails sequencing all of an organism's .... ''T. pseudonana'' was selected for this study because it is a model for diatom physiology studies, belongs to a genus widely distributed throughout the world's oceans, and has a relatively small genome at 34 mega base pairs. Scientists are researching on diatom light absorption, using the marine diatom ''Thalassiosira''. Ref ...
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Skeletonemataceae
Skeletonemataceae is a family of centric diatoms in the order Thalassiosirales. There is currently only one living and one fossil genus in this family. Their sexual reproduction is oogamous Oogamy is a form of anisogamy where the gametes differ in both size and form. In oogamy the large female gamete (also known as ovum) is immotile, while the small male gamete (also known as spermatozoon) is mobile. Oogamy is a common form of anis ..., where reproduction occurs by the union of mobile male and immobile female gametes. They lack significant motility. References Thalassiosirales Diatom families {{Diatom-stub ...
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Thalassiosiraceae
Thalassiosiraceae is a family of diatoms in the order Thalassiosirales. The family of Thalassiosiraceae have the unique quality of having a flat valve face. These diatoms are common in brackish, nearshore, and open-ocean habitats, with approximately the same number of freshwater and marine species. Morphology and ultrastructure Thalassiosiraceae include some of the smallest known diatoms, such as the genera '' Minidiscus'' and ''Mediolabrus'' with diameters as small as 1.9 μm (in '' M. comicus''). Unlike Naviculaceae who are symmetrical in shape, some Thalassiosiraceae are tangentially undulate. Thalassiosiraceae are centric diatoms with fultoportulae (central tube passing through the valve and two or more satellite pores). These structures can often be mistaken for areolae present in many diatom families that can be found in different forms such as those in ''Navicula'' or ''Gomphoneis'' known as lineolate and punctate areolae''.'' Model organisms The species ''Thalassios ...
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Stephanodiscaceae
Stephanodiscaceae is a family of diatom A diatom (Neo-Latin ''diatoma'') is any member of a large group comprising several Genus, genera of algae, specifically microalgae, found in the oceans, waterways and soils of the world. Living diatoms make up a significant portion of Earth's B ...s belonging to the order Stephanodiscales. Genera include: * '' Brevisira'' Krammer * '' Concentrodiscus'' G.C.Khursevich, A.I.Moisseeva & G.A.Sukhova * '' Crateriportula'' Flower & Håkansson * ''Cribrionella'' Jovanovska, Cvetkoska, Tofilovska, Ognjanova-Rumenova & Levkov * ''Cyclocostis'' Paillès * ''Cyclostephanopsis'' Loginova * ''Cyclostephanos'' Round * ''Cyclotella'' (Kützing) Brébisson * ''Cyclotubicoalitus'' Stoermer, E.F.Kociolek & W.Cody * ''Dimidialimbus'' H.Tanaka & T.Nagumo * ''Discotella'' V.Houk & R.Klee * ''Edtheriotia'' Kociolek, Q.M.You, Stepanek, R.L.Lowe et Q-X. Wang References Thalassiosirales Diatom families {{diatom-stub ...
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Diatom
A diatom (Neo-Latin ''diatoma'') is any member of a large group comprising several Genus, genera of algae, specifically microalgae, found in the oceans, waterways and soils of the world. Living diatoms make up a significant portion of Earth's Biomass (ecology), biomass. They generate about 20 to 50 percent of the oxygen produced on the planet each year, take in over 6.7 billion tonnes of silicon each year from the waters in which they live, and constitute nearly half of the organic material found in the oceans. The Protist shell, shells of dead diatoms are a significant component of marine sediment, and the entire Amazon basin is fertilized annually by 27 million tons of diatom shell dust transported by transatlantic winds from the African Sahara, much of it from the Bodélé Depression, which was once made up of a system of fresh-water lakes. Diatoms are unicellular organisms: they occur either as solitary cells or in Colony (biology), colonies, which can take the shape of ribb ...
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Thalassiosira Pseudonana
''Thalassiosira pseudonana'' is a species of marine centric Bulka diatoms. It was chosen as the first eukaryotic marine phytoplankton for whole genome sequencing. ''T. pseudonana'' was selected for this study because it is a model for diatom physiology studies, belongs to a genus widely distributed throughout the world's oceans, and has a relatively small genome at 34 mega base pairs. Scientists are researching on diatom light absorption, using the marine diatom of Thalassiosira. The diatom requires a high enough concentration of CO2 in order to utilize C4 metabolism (Clement ''et al.'' 2015). The clone of ''T. pseudonana'' that was sequenced is CCMP 1335 and is available from the National Center for Marine Algae and Microbiota at Bigelow Laboratory for Ocean Sciences. This clone was originally collected in 1958 from Moriches Bay ( Long Island, New York) and has been maintained continuously in culture. Morphology ''Thalassiosira pseudonana'' has a radial symmetry. It ...
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Eukaryote
The eukaryotes ( ) constitute the Domain (biology), domain of Eukaryota or Eukarya, organisms whose Cell (biology), cells have a membrane-bound cell nucleus, nucleus. All animals, plants, Fungus, fungi, seaweeds, and many unicellular organisms are eukaryotes. They constitute a major group of Outline of life forms, life forms alongside the two groups of prokaryotes: the Bacteria and the Archaea. Eukaryotes represent a small minority of the number of organisms, but given their generally much larger size, their collective global biomass is much larger than that of prokaryotes. The eukaryotes emerged within the archaeal Kingdom (biology), kingdom Asgard (Archaea), Promethearchaeati and its sole phylum Promethearchaeota. This implies that there are only Two-domain system, two domains of life, Bacteria and Archaea, with eukaryotes incorporated among the Archaea. Eukaryotes first emerged during the Paleoproterozoic, likely as Flagellated cell, flagellated cells. The leading evolutiona ...
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Phytoplankton
Phytoplankton () are the autotrophic (self-feeding) components of the plankton community and a key part of ocean and freshwater Aquatic ecosystem, ecosystems. The name comes from the Greek language, Greek words (), meaning 'plant', and (), meaning 'wanderer' or 'drifter'. Phytoplankton obtain their energy through photosynthesis, as trees and other plants do on land. This means phytoplankton must have light from the sun, so they live in the well-lit surface layers (euphotic zone) of oceans and lakes. In comparison with terrestrial plants, phytoplankton are distributed over a larger surface area, are exposed to less seasonal variation and have markedly faster turnover rates than trees (days versus decades). As a result, phytoplankton respond rapidly on a global scale to climate variations. Phytoplankton form the base of marine and freshwater food webs and are key players in the global carbon cycle. They account for about half of global photosynthetic activity and at least half o ...
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Genome Sequence
A genome is all the genetic information of an organism. It consists of nucleotide sequences of DNA (or RNA in RNA viruses). The nuclear genome includes protein-coding genes and non-coding genes, other functional regions of the genome such as regulatory sequences (see non-coding DNA), and often a substantial fraction of junk DNA with no evident function. Almost all eukaryotes have mitochondria and a small mitochondrial genome. Algae and plants also contain chloroplasts with a chloroplast genome. The study of the genome is called genomics. The genomes of many organisms have been sequenced and various regions have been annotated. The first genome to be sequenced was that of the virus φX174 in 1977; the first genome sequence of a prokaryote (''Haemophilus influenzae'') was published in 1995; the yeast (''Saccharomyces cerevisiae'') genome was the first eukaryotic genome to be sequenced in 1996. The Human Genome Project was started in October 1990, and the first draft sequences ...
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