San Francisco garter snake
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The San Francisco garter snake (''Thamnophis sirtalis tetrataenia'') is a slender multi-colored
subspecies In biological classification, subspecies is a rank below species, used for populations that live in different areas and vary in size, shape, or other physical characteristics ( morphology), but that can successfully interbreed. Not all specie ...
of the common garter snake. Designated as an endangered subspecies since the year 1967, it is
endemic Endemism is the state of a species being found in a single defined geographic location, such as an island, state, nation, country or other defined zone; organisms that are indigenous to a place are not endemic to it if they are also found else ...
to San Mateo County and the extreme northern part of coastal Santa Cruz County in
California California is a state in the Western United States, located along the Pacific Coast. With nearly 39.2million residents across a total area of approximately , it is the most populous U.S. state and the 3rd largest by area. It is also the m ...
. Some researchers estimate that there are only 1,000 to 2,000 adult snakes of the subspecies ''T. s. tetrataenia'' remaining. However, the full extent of the snakes' habitat has not been fully documented, and many snakes may utilize creeks and other waterways that are currently unexplored. This garter snake prefers wet and marshy areas, and because of its elusive nature, it is difficult to see or capture.


Geographic range

The
San Francisco San Francisco (; Spanish for " Saint Francis"), officially the City and County of San Francisco, is the commercial, financial, and cultural center of Northern California. The city proper is the fourth most populous in California and 17t ...
garter snake, a subspecies of the common garter snake, is found in scattered wetland areas on the San Francisco Peninsula from approximately the northern boundary of San Mateo County south along the eastern and western bases of the
Santa Cruz Mountains The Santa Cruz Mountains, part of the Pacific Coast Ranges, are a mountain range in central and Northern California, United States. They form a ridge down the San Francisco Peninsula, south of San Francisco. They separate the Pacific Ocean from ...
, at least to the Upper
Crystal Springs Reservoir Crystal Springs Reservoir is a pair of artificial lakes located in the northern Santa Cruz Mountains of San Mateo County, California situated in the rift valley created by the San Andreas Fault just to the west of the cities of San Mateo and Hi ...
, and along the
Pacific The Pacific Ocean is the largest and deepest of Earth's five oceanic divisions. It extends from the Arctic Ocean in the north to the Southern Ocean (or, depending on definition, to Antarctica) in the south, and is bounded by the contine ...
coast south to Año Nuevo Point, and thence to Waddell Creek in Santa Cruz County. It is difficult to obtain reliable distribution information and population statistics for the San Francisco garter snake, because of the elusive nature of this reptile and the fact that much of the remaining suitable habitat is located on private property that has not been surveyed for the presence of the snake. This subspecies is extremely shy, difficult to locate and capture, and quick to flee to water or cover when disturbed. The U.S. Fish and Wildlife Service has stated that many locations that previously had healthy populations of garter snakes are now in decline due to land development pressure and the filling of
wetland A wetland is a distinct ecosystem that is flooded or saturated by water, either permanently (for years or decades) or seasonally (for weeks or months). Flooding results in oxygen-free (Anoxic waters, anoxic) processes prevailing, especially in t ...
s in San Mateo County over the last sixty years. However, in many areas where it still occurs, it is not rare, but is actually quite common and can be viewed with good success once its behavior is understood.


Description

Adult San Francisco garter snakes can grow to a total length of 18 - 55 inches (46 – 140 cm). They have keeled dorsal scales of blue-green, bordered by stripes of black, red (sometimes orange), and blue-green. Their head is barely wider than the neck, and is red. Its eyes are large compared to other species of garter snakes, giving the snake good eyesight to be primarily active during the day. Studies have shown that snout length is indicative of reproductive behaviors, as great snout length is correlated with ovarian follicle growth, which increases sexual activity of the female subspecies. Garter snakes are practically harmless to humans. Their bites are fatal to their prey, but only cause a mild irritation for humans. With mildly toxic venom in their saliva, garter snakes possess no fangs.


Habitat

The preferred
habitat In ecology, the term habitat summarises the array of resources, physical and biotic factors that are present in an area, such as to support the survival and reproduction of a particular species. A species habitat can be seen as the physical ...
of the San Francisco garter snake is a densely vegetated pond near an open hillside where it can sun, feed, and find cover in
rodent Rodents (from Latin , 'to gnaw') are mammals of the order Rodentia (), which are characterized by a single pair of continuously growing incisors in each of the upper and lower jaws. About 40% of all mammal species are rodents. They are n ...
burrow An Eastern chipmunk at the entrance of its burrow A burrow is a hole or tunnel excavated into the ground by an animal to construct a space suitable for habitation or temporary refuge, or as a byproduct of locomotion. Burrows provide a form of s ...
s; however, markedly less suitable habitat can be successfully used. This subspecies can also be found in forests with dense canopies. Temporary
pond A pond is an area filled with water, either natural or artificial, that is smaller than a lake. Defining them to be less than in area, less than deep, and with less than 30% emergent vegetation helps in distinguishing their ecology from tha ...
s and other seasonal
freshwater Fresh water or freshwater is any naturally occurring liquid or frozen water containing low concentrations of dissolved salts and other total dissolved solids. Although the term specifically excludes seawater and brackish water, it does incl ...
bodies are also appropriate. This subspecies avoids brackish marsh areas because its preferred
prey Predation is a biological interaction where one organism, the predator, kills and eats another organism, its prey. It is one of a family of common feeding behaviours that includes parasitism and micropredation (which usually do not kill ...
, the
California red-legged frog The California red-legged frog (''Rana draytonii'') is a species of frog found in California (USA) and northern Baja California (Mexico). It was formerly considered a subspecies of the northern red-legged frog (''Rana aurora''). The frog is an IU ...
(''Rana draytonii''), cannot survive in
saline water Saline water (more commonly known as salt water) is water that contains a high concentration of dissolved salts (mainly sodium chloride). On the United States Geological Survey (USGS) salinity scale, saline water is saltier than brackish water ...
. Emergent and bankside vegetation such as cattails (''
Typha ''Typha'' is a genus of about 30 species of monocotyledonous flowering plants in the family Typhaceae. These plants have a variety of common names, in British English as bulrush or reedmace, in American English as reed, cattail, or punks, in ...
'' spp.), bulrushes (''
Scirpus ''Scirpus'' is a genus of grass-like species in the sedge family Cyperaceae many with the common names club-rush, wood club-rush or bulrush (see also bulrush for other plant genera so-named). They mostly inhabit wetlands and damp locations. Taxo ...
'' / ''
Schoenoplectus ''Schoenoplectus'' (club-rush ld World species bulrush or tule ew World species is a genus of plants in the sedges with a cosmopolitan distribution. Note that the name bulrush is also applied to species in the unrelated genus ''Typha'' as well ...
'' spp.), and spike rushes (''
Juncus ''Juncus'' is a genus of monocotyledonous flowering plants, commonly known as rushes. It is the largest genus in the family Juncaceae, containing around 300 species. Description Rushes of the genus ''Juncus'' are herbaceous plants that superfici ...
'' spp. and '' Eleocharis'' spp.) apparently are preferred and used for cover. The zone between
stream A stream is a continuous body of surface water flowing within the bed and banks of a channel. Depending on its location or certain characteristics, a stream may be referred to by a variety of local or regional names. Long large streams ...
and
pond A pond is an area filled with water, either natural or artificial, that is smaller than a lake. Defining them to be less than in area, less than deep, and with less than 30% emergent vegetation helps in distinguishing their ecology from tha ...
habitats and
grassland A grassland is an area where the vegetation is dominated by grasses ( Poaceae). However, sedge ( Cyperaceae) and rush ( Juncaceae) can also be found along with variable proportions of legumes, like clover, and other herbs. Grasslands occur na ...
s or bank sides is characteristically utilized for basking, while nearby dense vegetation or water often provide escape cover. The subspecies occasionally uses floating
algal Algae (; singular alga ) is an informal term for a large and diverse group of photosynthetic eukaryotic organisms. It is a polyphyletic grouping that includes species from multiple distinct clades. Included organisms range from unicellular micr ...
or rush mats, when available. The biggest population is found in a protected tract owned by
San Francisco International Airport San Francisco International Airport is an international airport in an unincorporated area of San Mateo County, south of Downtown San Francisco. It has flights to points throughout North America and is a major gateway to Europe, the Middl ...
.


Diet

San Francisco garter snakes forage extensively in
aquatic habitat Marine biology is the scientific study of the biology of marine life, organisms in the sea. Given that in biology many phyla, families and genera have some species that live in the sea and others that live on land, marine biology classifies s ...
s. Adult snakes feed primarily on
California red-legged frog The California red-legged frog (''Rana draytonii'') is a species of frog found in California (USA) and northern Baja California (Mexico). It was formerly considered a subspecies of the northern red-legged frog (''Rana aurora''). The frog is an IU ...
s (''Rana draytonii''), which are federally listed as threatened. They may also feed on juvenile
American bullfrog The American bullfrog (''Lithobates catesbeianus''), often simply known as the bullfrog in Canada and the United States, is a large true frog native to eastern North America. It typically inhabits large permanent water bodies such as swamps, p ...
s (''Rana catesbeiana''), but they are unable to consume adults; in fact, adult bullfrogs prey on juvenile garter snakes, and may be a contributing factor in the population decline of the San Francisco garter snake. Newborn and juvenile San Francisco garter snakes depend heavily upon Pacific treefrogs (''Pseudacris regilla'' ) as prey. If newly metamorphosed Pacific treefrogs are not available, the young garter snakes may not survive. San Francisco garter snakes are one of the few animals capable of ingesting the
toxic Toxicity is the degree to which a chemical substance or a particular mixture of substances can damage an organism. Toxicity can refer to the effect on a whole organism, such as an animal, bacterium, or plant, as well as the effect on a sub ...
California newt The California newt or orange-bellied newt (''Taricha torosa''), is a species of newt endemic to California, in the Western United States. Its adult length can range from . Its skin produces the potent toxin tetrodotoxin. Subspecies ''Taricha ...
(''Taricha torosa'') without incurring sickness or death.


Taxonomy and relation to other garter snakes

For a brief period from 1996 to 2000 there was confusion over the differentiation of the San Francisco garter snake from two other subspecies from California, the California red-sided garter snake (''T. s. infernalis'') and the red-spotted garter snake (''T. s. concinnus''). Barry petitioned the
International Commission on Zoological Nomenclature The International Commission on Zoological Nomenclature (ICZN) is an organization dedicated to "achieving stability and sense in the scientific naming of animals". Founded in 1895, it currently comprises 26 commissioners from 20 countries. Orga ...
(ICZN) to suppress the changes proposed in 1996 to merge two of these species. In 2000, the ICZN agreed and voted to retain the historical taxonomic arrangement of subspecies within this evolutionary lineage. Accordingly, the subspecies ''tetrataenia'' was reaffirmed for the San Francisco garter snake and the races ''concinnus'' and ''infernalis'' retain their historical definition. The San Francisco garter snake cohabits ecosystems that also host a subspecies of two other garter snake species: the coastal garter snake (''Thamnophis elegans terrestris''), a subspecies of the western terrestrial garter snake (''T. elegans''), and the Santa Cruz garter snake (''Thamnophis atratus atratus'') a subspecies of the aquatic garter snake (''T. atratus''). These three subspecies are known to prey upon the same foods; however, their preferences are slightly different. Herpetologist Sean Barry notes that the three subspecies divide up the food resources as follows: * the San Francisco garter snake eats primarily small frogs; * the coastal garter snake eats principally slugs; * the Santa Cruz garter snake eats preferentially minute fish and amphibian larvae.


DNA analysis

While the findings of the ICZN have given the San Francisco garter snake unique taxonomic standing for now, a molecular study challenges the subspecific status of this population. Janzen analyzed sequences in
mitochondrial A mitochondrion (; ) is an organelle found in the cells of most Eukaryotes, such as animals, plants and fungi. Mitochondria have a double membrane structure and use aerobic respiration to generate adenosine triphosphate (ATP), which is used t ...
DNA to determine relationships within the subspecies of the common garter snake (''T. sirtalis''). Janzen found that molecular evidence differed, often sharply, with the territorial boundaries of subspecies named on phenotypic variation. He further deduced that local environmental forces were more significant in shaping the color patterns shown by the common garter snake subspecies than shared common ancestry, and concluded all morphologically based subspecies in the western U.S. to be subject to revision. This result strongly suggests that the color traits that are diagnostic for ''T. s. tetrataenia'' are the result of local selection, rather than long-term isolation from the other subspecies of ''T. sirtalis'' in central California. On the other hand, the article places the three nearest populations of ''T. s. infernalis'' to ''T. s. tetrataenia'' in Sonoma County,
Contra Costa County ) of the San Francisco Bay , subdivision_type = Country , subdivision_name = United States , subdivision_type1 = State , subdivision_name1 = California , subdivision_type2 ...
, and
Santa Clara County Santa Clara County, officially the County of Santa Clara, is the sixth-most populous county in the U.S. state of California, with a population of 1,936,259, as of the 2020 census. Santa Clara County and neighboring San Benito County together ...
into a separate group that exhibits an "elevated rate of
molecular evolution Molecular evolution is the process of change in the sequence composition of cellular molecules such as DNA, RNA, and proteins across generations. The field of molecular evolution uses principles of evolutionary biology and population genet ...
". The authors suggest that sequencing
nuclear DNA Nuclear DNA (nDNA), or nuclear deoxyribonucleic acid, is the DNA contained within each cell nucleus of a eukaryotic organism. It encodes for the majority of the genome in eukaryotes, with mitochondrial DNA and plastid DNA coding for the rest. I ...
may provide a more precise analytical tool to crack some of the ultimate taxonomic quandaries of the San Francisco garter snake and its relatives.


Outlook for this subspecies

Many of the factors that led to the listing of the San Francisco garter snake in 1967 continue to affect the subspecies. These environmental elements include loss of habitat from agricultural, commercial and urban development, as well as collection by reptile fanciers and breeders. Collection of these endangered animals by private citizens remains illegal.U.S. Fish & Wildlife Service, Sacramento Fish & Wildlife Office, Species Account, SAN FRANCISCO GARTER SNAKE ''Thamnophis sirtalis tetrataenia''; updated October 9, 2007.


References


Further reading

* Behler JL, King FW (1979). ''The Audubon Society Field Guide to North American Reptiles and Amphibians''. New York: Alfred A. Knopf. 743 pp. . (''Thamnophis sirtalis tetrataenia'', p. 676 + Plate 541). * Cope ED (1875). ''In'' Yarrow HC (1875). ''Report upon the Collections of Batrachians and Reptiles made in Portions of Nevada, Utah, California, Colorado, New Mexico, and Arizona, during the Years 1871, 1872, 1873, and 1874. Chapter IV.'' Washington, District of Columbia: United States Government. pp. 509–584. (''Eutaenia sirtalis tetratænia'', new subspecies, p. 546). * Smith HM, Brodie ED Jr (1982). ''Reptiles of North America: A Guide to Field Identification''. New York: Golden Press. 240 pp. . (''Thamnophis sirtalis tetrataenia'', pp. 148–149). * Stebbins RC (2003). ''A Field Guide to Western Reptiles and Amphibians, Third Edition''. The Peterson Field Guide Series ®. Boston and New York: Houghton Mifflin Company. xiii + 533 pp. . (''Thamnophis sirtalis tetrataenia'', pp. 376–377 + Plate 48 + Map 162). * Wright AH, Wright AA (1957). ''Handbook of Snakes of the United States and Canada''. Ithaca and London: Comstock Publishing Assosciates. 1,105 pp. (in two volumes). (''Thamnophis sirtalis tetrataenia'', pp. 861–863 + Figure 248 + Maps 59, 60). {{Authority control Thamnophis Endemic fauna of California Fauna of the San Francisco Bay Area Natural history of San Mateo County, California Natural history of Santa Cruz County, California Reptiles of the United States Endangered fauna of California ESA endangered species