SAR11 clade
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The Pelagibacterales are an order in the
Alphaproteobacteria Alphaproteobacteria is a class of bacteria in the phylum Pseudomonadota (formerly Proteobacteria). The Magnetococcales and Mariprofundales are considered basal or sister to the Alphaproteobacteria. The Alphaproteobacteria are highly diverse and ...
composed of free-living marine bacteria that make up roughly one in three cells at the ocean's surface. Overall, members of the ''Pelagibacterales'' are estimated to make up between a quarter and a half of all
prokaryotic A prokaryote () is a single-celled organism that lacks a nucleus and other membrane-bound organelles. The word ''prokaryote'' comes from the Greek πρό (, 'before') and κάρυον (, 'nut' or 'kernel').Campbell, N. "Biology:Concepts & Connec ...
cells in the ocean. Initially, this taxon was known solely by metagenomic data and was known as the SAR11 clade. It was first placed in the Rickettsiales, but was later raised to the rank of
order Order, ORDER or Orders may refer to: * Categorization, the process in which ideas and objects are recognized, differentiated, and understood * Heterarchy, a system of organization wherein the elements have the potential to be ranked a number of ...
, and then placed as sister order to the Rickettsiales in the subclass Rickettsidae. It includes the highly abundant marine species '' Pelagibacter ubique''. Bacteria in this order are unusually small. Due to their small genome size and limited metabolic function, ''Pelagibacterales'' have become a model organism for '
streamlining theory Genomic streamlining is a theory in evolutionary biology and microbial ecology that suggests that there is a reproductive benefit to prokaryotes having a smaller genome size with less non-coding DNA and fewer non-essential genes. There is a lot of v ...
'. ''P. ubique'' and related species are
oligotroph An oligotroph is an organism that can live in an environment that offers very low levels of nutrients. They may be contrasted with copiotrophs, which prefer nutritionally rich environments. Oligotrophs are characterized by slow growth, low rates o ...
s (scavengers) and feed on dissolved organic carbon and nitrogen. They are unable to fix carbon or nitrogen, but can perform the
TCA cycle The citric acid cycle (CAC)—also known as the Krebs cycle or the TCA cycle (tricarboxylic acid cycle)—is a series of chemical reactions to release stored energy through the oxidation of acetyl-CoA derived from carbohydrates, fats, and prote ...
with glyoxylate bypass and are able to synthesise all amino acids except glycine, as well as some cofactors. They also have an unusual and unexpected requirement for reduced sulfur. ''P. ubique'' and members of the oceanic subgroup I possess
gluconeogenesis Gluconeogenesis (GNG) is a metabolic pathway that results in the generation of glucose from certain non- carbohydrate carbon substrates. It is a ubiquitous process, present in plants, animals, fungi, bacteria, and other microorganisms. In verteb ...
, but not a typical
glycolysis Glycolysis is the metabolic pathway that converts glucose () into pyruvate (). The free energy released in this process is used to form the high-energy molecules adenosine triphosphate (ATP) and reduced nicotinamide adenine dinucleotide (NADH ...
pathway, whereas other subgroups are capable of typical glycolysis. Unlike '' Acaryochloris marina'', ''P. ubique'' is not
photosynthetic Photosynthesis is a process used by plants and other organisms to convert light energy into chemical energy that, through cellular respiration, can later be released to fuel the organism's activities. Some of this chemical energy is stored in ...
— specifically, it does not use light to increase the bond energy of an electron pair — but it does possess proteorhodopsin (including
retinol Retinol, also called vitamin A1, is a fat-soluble vitamin in the vitamin A family found in food and used as a dietary supplement. As a supplement it is used to treat and prevent vitamin A deficiency, especially that which results in xeroph ...
biosynthesis) for ATP production from light. SAR11 bacteria are responsible for much of the dissolved
methane Methane ( , ) is a chemical compound with the chemical formula (one carbon atom bonded to four hydrogen atoms). It is a group-14 hydride, the simplest alkane, and the main constituent of natural gas. The relative abundance of methane ...
in the ocean surface. They extract phosphate from
methylphosphonic acid Methylphosphonic acid is an organophosphorus compound with the chemical formula CH3P(O)(OH)2. The phosphorus center is tetrahedral and is bonded to a methyl group, two OH groups and an oxygen. Methylphosphonic acid is a white, non-volatile solid t ...
. Although the taxon derives its name from the type species ''P. ubique'' (status'' Candidatus'' species), this species has not yet been validly published, and therefore neither the order name nor the species name has official taxonomic standing.


Subgroups

Currently, the order is divided into five subgroups: * Subgroup Ia, open ocean, crown group — includes ''P. ubique'' HTCC1062 * Subg * Subgroup II, coastal, basal to Ia + Ib * Subgroup III, brackish, basal to I + II along with its sister clade IV * Subgroup IV, also known as the LD12 clade, freshwater * Subgroup V, which includes alphaproteobacterium HIMB59, basal to the remainder The above results in a cladogram of the Pelagibacterales as follows:


Phylogenetic placement and endosymbiotic theory

A 2011 study by researchers of the
University of Hawaiʻi at Mānoa The University of Hawaii at Mānoa (University of Hawaii—Mānoa, UH Mānoa, Hawai'i, or simply UH) is a public land-grant research university in Mānoa, a neighborhood in Honolulu, Hawaii. It is the flagship campus of the University of Haw ...
and
Oregon State University Oregon State University (OSU) is a public land-grant, research university in Corvallis, Oregon. OSU offers more than 200 undergraduate-degree programs along with a variety of graduate and doctoral degrees. It has the 10th largest engineering ...
, indicated that SAR11 could be the ancestor of
mitochondria A mitochondrion (; ) is an organelle found in the cells of most Eukaryotes, such as animals, plants and fungi. Mitochondria have a double membrane structure and use aerobic respiration to generate adenosine triphosphate (ATP), which is used ...
in most eukaryotic cells. However, this result could represent a tree reconstruction artifact due to compositional bias.


References

{{Taxonbar, from=Q7388740 Alphaproteobacteria