Non-covalent interactions index
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The Non-Covalent Interactions index, commonly referred to as simply Non-Covalent Interactions (NCI) is a visualization index based in the
Electron density In quantum chemistry, electron density or electronic density is the measure of the probability of an electron being present at an infinitesimal element of space surrounding any given point. It is a scalar quantity depending upon three spatial va ...
(ρ) and the reduced density gradient (s). It is based on the empirical observation that
Non-covalent interactions In chemistry, a non-covalent interaction differs from a covalent bond in that it does not involve the sharing of electrons, but rather involves more dispersed variations of electromagnetic interactions between molecules or within a molecule. The ...
can be associated with the regions of small reduced density gradient at low electronic densities. In quantum chemistry, the non-covalent interactions index is used to visualize non-covalent interactions in three-dimensional space. Its visual representation arises from the isosurfaces of the reduced density gradient colored by a scale of strength. The strength is usually estimated through the product of the electron density and the second eigenvalue (λ) of the Hessian of the electron density in each point of the isosurface, with the attractive or repulsive character being determined by the sign of λ. This allows for a direct representation and characterization of non-covalent interactions in three-dimensional space, including hydrogen bonds and steric clashes. Being based on the electron density and derived scalar fields, NCI indexes are invariant with respect to the transformation of molecular orbitals. Furthermore, the electron density of a system can be calculated both by
X-ray diffraction X-ray crystallography is the experimental science determining the atomic and molecular structure of a crystal, in which the crystalline structure causes a beam of incident X-rays to diffract into many specific directions. By measuring the angles ...
experiments and theoretical wavefunction calculations. The reduced density gradient (s) is a scalar field of the electron density (ρ) that can be defined as s(\mathbf) = \frac Within the Density Functional Theory framework the reduced density gradient arises in the definition of the Generalized Gradient Approximation of the exchange functional. The original definition is s(\mathbf) = \frac in which k is the Fermi momentum of the
free electron gas Free electron in physics may refer to: *Electron, as a free particle *Solvated electron *Charge carrier, as carriers of electric charge *Valence electron, as an outer shell electron that is associated with an atom *Valence and conduction bands, as a ...
. The NCI was developed by Canadian computational chemist
Erin Johnson Erin Johnson is a Canadian computational chemist. She holds the Herzberg–Becke Chair at Dalhousie University. She works on density functional theory and intermolecular interactions. Education and early career Johnson is from Ottawa, Canada. ...
while she was a postdoctoral fellow at
Duke University Duke University is a private research university in Durham, North Carolina. Founded by Methodists and Quakers in the present-day city of Trinity in 1838, the school moved to Durham in 1892. In 1924, tobacco and electric power industrialist Jam ...
in the group of
Weitao Yang Weitao Yang (; born March 31, 1961) is a Chinese-born American chemist who is the Philip Handler Professor of Chemistry at Duke University. His main contributions to chemistry include density functional theory development, and its applications t ...
.


References

{{Reflist Chemical bonding