Myotome (embryology)
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The somites (outdated term: primitive segments) are a set of bilaterally paired blocks of
paraxial mesoderm Paraxial mesoderm, also known as presomitic or somitic mesoderm is the area of mesoderm in the neurulating embryo that flanks and forms simultaneously with the neural tube. The cells of this region give rise to somites, blocks of tissue running ...
that form in the embryonic stage of
somitogenesis Somitogenesis is the process by which somites form. Somites are bilaterally paired blocks of paraxial mesoderm that form along the anterior-posterior axis of the developing embryo in segmented animals. In vertebrates, somites give rise to skelet ...
, along the head-to-tail axis in segmented animals. In
vertebrate Vertebrates () comprise all animal taxa within the subphylum Vertebrata () (chordates with backbones), including all mammals, birds, reptiles, amphibians, and fish. Vertebrates represent the overwhelming majority of the phylum Chordata, with c ...
s, somites subdivide into the dermatomes, myotomes, sclerotomes and syndetomes that give rise to the
vertebrae The spinal column, a defining synapomorphy shared by nearly all vertebrates, Hagfish are believed to have secondarily lost their spinal column is a moderately flexible series of vertebrae (singular vertebra), each constituting a characteristi ...
of the
vertebral column The vertebral column, also known as the backbone or spine, is part of the axial skeleton. The vertebral column is the defining characteristic of a vertebrate in which the notochord (a flexible rod of uniform composition) found in all chordate ...
,
rib cage The rib cage, as an enclosure that comprises the ribs, vertebral column and sternum in the thorax of most vertebrates, protects vital organs such as the heart, lungs and great vessels. The sternum, together known as the thoracic cage, is a sem ...
, part of the occipital bone, skeletal muscle, cartilage,
tendon A tendon or sinew is a tough, high-tensile-strength band of dense fibrous connective tissue that connects muscle to bone. It is able to transmit the mechanical forces of muscle contraction to the skeletal system without sacrificing its ability ...
s, and
skin Skin is the layer of usually soft, flexible outer tissue covering the body of a vertebrate animal, with three main functions: protection, regulation, and sensation. Other animal coverings, such as the arthropod exoskeleton, have different de ...
(of the back). The word ''somite'' is sometimes also used in place of the word '' metamere''. In this definition, the somite is a homologously-paired structure in an animal
body plan A body plan, ( ), or ground plan is a set of morphological features common to many members of a phylum of animals. The vertebrates share one body plan, while invertebrates have many. This term, usually applied to animals, envisages a "blueprin ...
, such as is visible in
annelids The annelids (Annelida , from Latin ', "little ring"), also known as the segmented worms, are a large phylum, with over 22,000 extant species including ragworms, earthworms, and leeches. The species exist in and have adapted to various ecolog ...
and arthropods.


Development

The mesoderm forms at the same time as the other two germ layers, the ectoderm and endoderm. The mesoderm at either side of the neural tube is called
paraxial mesoderm Paraxial mesoderm, also known as presomitic or somitic mesoderm is the area of mesoderm in the neurulating embryo that flanks and forms simultaneously with the neural tube. The cells of this region give rise to somites, blocks of tissue running ...
. It is distinct from the mesoderm underneath the neural tube which is called the chordamesoderm that becomes the notochord. The paraxial mesoderm is initially called the “segmental plate” in the chick embryo or the “unsegmented mesoderm” in other vertebrates. As the primitive streak regresses and neural folds gather (to eventually become the
neural tube In the developing chordate (including vertebrates), the neural tube is the embryonic precursor to the central nervous system, which is made up of the brain and spinal cord. The neural groove gradually deepens as the neural fold become elevated, ...
), the paraxial mesoderm separates into blocks called somites.


Formation

The pre-somitic mesoderm commits to the somitic fate before mesoderm becomes capable of forming somites. The cells within each somite are specified based on their location within the somite. Additionally, they retain the ability to become any kind of somite-derived structure until relatively late in the process of
somitogenesis Somitogenesis is the process by which somites form. Somites are bilaterally paired blocks of paraxial mesoderm that form along the anterior-posterior axis of the developing embryo in segmented animals. In vertebrates, somites give rise to skelet ...
. The development of the somites depends on a clock mechanism as described by the
clock and wavefront model The clock and wavefront model is a model used to describe the process of somitogenesis in vertebrates. Somitogenesis is the process by which somites, blocks of mesoderm that give rise to a variety of connective tissues, are formed. The model descri ...
. In one description of the model, oscillating Notch and Wnt signals provide the clock. The wave is a gradient of the FGF protein that is rostral to caudal (nose to tail gradient). Somites form one after the other down the length of the embryo from the head to the tail, with each new somite forming on the caudal (tail) side of the previous one. The timing of the interval is not universal. Different species have different interval timing. In the chick embryo somites are formed every 90 minutes. In the mouse the interval is 2 hours. For some species, the number of somites may be used to determine the stage of embryonic development more reliably than the number of hours post-fertilization because rate of development can be affected by temperature or other environmental factors. The somites appear on both sides of the
neural tube In the developing chordate (including vertebrates), the neural tube is the embryonic precursor to the central nervous system, which is made up of the brain and spinal cord. The neural groove gradually deepens as the neural fold become elevated, ...
simultaneously. Experimental manipulation of the developing somites will not alter the rostral/caudal orientation of the somites, as the cell fates have been determined prior to somitogenesis. Somite formation can be induced by ''
Noggin Noggin may refer to: General * Noggin or gill (volume), a unit of volume * Noggin (cup), a small cup * Noggin, slang for head A head is the part of an organism which usually includes the ears, brain, forehead, cheeks, chin, eyes, nose, an ...
''-secreting cells. The number of somites is species dependent and independent of embryo size (for example, if modified via surgery or genetic engineering). Chicken embryos have 50 somites; mice have 65, while snakes have 500. As cells within the paraxial mesoderm begin to come together, they are termed somitomeres, indicating a lack of complete separation between segments. The outer cells undergo a
mesenchymal–epithelial transition A mesenchymal–epithelial transition (MET) is a reversible biological process that involves the transition from motile, multipolar or spindle-shaped mesenchymal cells to planar arrays of polarized cells called epithelia. MET is the reverse proce ...
to form an epithelium around each somite. The inner cells remain as mesenchyme.


Notch signalling

The ''Notch'' system, as part of the clock and wavefront model, forms the boundaries of the somites. '' DLL1'' and '' DLL3'' are ''Notch''
ligand In coordination chemistry, a ligand is an ion or molecule ( functional group) that binds to a central metal atom to form a coordination complex. The bonding with the metal generally involves formal donation of one or more of the ligand's elec ...
s, mutations of which cause various defects. Notch regulates ''
HES1 Transcription factor HES1 (hairy and enhancer of split-1) is a protein that is encoded by the ''Hes1'' gene, and is the mammalian homolog of the hairy gene in ''Drosophila.'' HES1 is one of the seven members of the Hes gene family (HES1-7). Hes ge ...
'', which sets up the caudal half of the somite. ''Notch'' activation turns on ''
LFNG Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe, (Lunatic Fringe), is a protein encoded in humans by the ''LFNG'' gene. This gene encodes a member of the glycosyltransferase superfamily. The encoded protein is a single-pass type II Golgi m ...
'' which in turn inhibits the ''Notch'' receptor. ''Notch'' activation also turns on the '' HES1 gene'' which inactivates ''LFNG'', re-enabling the ''Notch'' receptor, and thus accounting for the oscillating clock model. '' MESP2'' induces the ''
EPHA4 EPH receptor A4 (ephrin type-A receptor 4) is a protein that in humans is encoded by the ''EPHA4'' gene. This gene belongs to the ephrin receptor subfamily of the protein-tyrosine kinase family. EPH and EPH-related receptors have been implicated ...
'' gene, which causes repulsive interaction that separates somites by causing segmentation. ''EPHA4'' is restricted to the boundaries of somites. ''
EPHB2 Ephrin type-B receptor 2 is a protein that in humans is encoded by the ''EPHB2'' gene. Function Ephrin receptors and their ligands, the ephrins, mediate numerous developmental processes, particularly in the nervous system. Based on their stru ...
'' is also important for boundaries.


Mesenchymal-epithelial transition

Fibronectin Fibronectin is a high- molecular weight (~500-~600 kDa) glycoprotein of the extracellular matrix that binds to membrane-spanning receptor proteins called integrins. Fibronectin also binds to other extracellular matrix proteins such as collage ...
and
N-cadherin Cadherin-2 also known as Neural cadherin (N-cadherin), is a protein that in humans is encoded by the ''CDH2'' gene. CDH2 has also been designated as CD325 (cluster of differentiation 325). Cadherin-2 is a transmembrane protein expressed in multipl ...
are key to the mesenchymal-epithelial transition process in the developing embryo. The process is probably regulated by paraxis and ''MESP2''. In turn, ''MESP2'' is regulated by ''Notch'' signaling. Paraxis is regulated by processes involving the
cytoskeleton The cytoskeleton is a complex, dynamic network of interlinking protein filaments present in the cytoplasm of all cells, including those of bacteria and archaea. In eukaryotes, it extends from the cell nucleus to the cell membrane and is com ...
.


Specification

The
Hox gene Hox genes, a subset of homeobox genes, are a group of related genes that specify regions of the body plan of an embryo along the head-tail axis of animals. Hox proteins encode and specify the characteristics of 'position', ensuring that the cor ...
s specify somites as a whole based on their position along the anterior-posterior axis through specifying the pre-somitic mesoderm before somitogenesis occurs. After somites are made, their identity as a whole has already been determined, as is shown by the fact that transplantation of somites from one region to a completely different region results in the formation of structures usually observed in the original region. In contrast, the cells within each somite retain plasticity (the ability to form any kind of structure) until relatively late in somitic development.


Derivatives

In the developing vertebrate embryo, somites split to form dermatomes, skeletal muscle (myotomes),
tendon A tendon or sinew is a tough, high-tensile-strength band of dense fibrous connective tissue that connects muscle to bone. It is able to transmit the mechanical forces of muscle contraction to the skeletal system without sacrificing its ability ...
s and cartilage (syndetomes) and
bone A bone is a rigid organ that constitutes part of the skeleton in most vertebrate animals. Bones protect the various other organs of the body, produce red and white blood cells, store minerals, provide structure and support for the body, ...
(sclerotomes). Because the sclerotome differentiates before the dermatome and the myotome, the term dermomyotome refers to the combined dermatome and myotome before they separate out.


Dermatome

The dermatome is the dorsal portion of the paraxial mesoderm somite which gives rise to the skin ( dermis). In the human embryo it arises in the third week of embryogenesis. It is formed when a dermomyotome (the remaining part of the somite left when the sclerotome migrates), splits to form the dermatome and the myotome. The dermatomes contribute to the skin,
fat In nutrition, biology, and chemistry, fat usually means any ester of fatty acids, or a mixture of such compounds, most commonly those that occur in living beings or in food. The term often refers specifically to triglycerides (triple est ...
and connective tissue of the neck and of the trunk, though most of the skin is derived from
lateral plate mesoderm The lateral plate mesoderm is the mesoderm that is found at the periphery of the embryo. It is to the side of the paraxial mesoderm, and further to the axial mesoderm. The lateral plate mesoderm is separated from the paraxial mesoderm by a narrow ...
.


Myotome

The myotome is that part of a somite that forms the muscles of the animal. Each myotome divides into an epaxial part (''epimere''), at the back, and a
hypaxial In adult vertebrates, trunk muscles can be broadly divided into hypaxial muscles, which lie ventral to the horizontal septum of the vertebrae and epaxial muscles, which lie dorsal to the septum. Hypaxial muscles include some vertebral muscles, the ...
part (''hypomere'') at the front. The
myoblast Myogenesis is the formation of skeletal muscular tissue, particularly during embryonic development. Muscle fibers generally form through the fusion of precursor myoblasts into multinucleated fibers called ''myotubes''. In the early development o ...
s from the hypaxial division form the muscles of the thoracic and anterior abdominal walls. The epaxial muscle mass loses its segmental character to form the
extensor muscles In anatomy, extension is a movement of a joint that increases the angle between two bones or body surfaces at a joint. Extension usually results in straightening of the bones or body surfaces involved. For example, extension is produced by extendin ...
of the neck and trunk of mammals. In fishes, salamanders, caecilians, and reptiles, the body musculature remains segmented as in the embryo, though it often becomes folded and overlapping, with epaxial and hypaxial masses divided into several distinct muscle groups.


Sclerotome

The sclerotome (or cutis plate) forms the
vertebra The spinal column, a defining synapomorphy shared by nearly all vertebrates, Hagfish are believed to have secondarily lost their spinal column is a moderately flexible series of vertebrae (singular vertebra), each constituting a characteristi ...
e and the rib cartilage and part of the occipital bone; the myotome forms the
musculature Skeletal muscles (commonly referred to as muscles) are organs of the vertebrate muscular system and typically are attached by tendons to bones of a skeleton. The muscle cells of skeletal muscles are much longer than in the other types of muscle ...
of the back, the ribs and the limbs; the syndetome forms the tendons and the dermatome forms the
skin Skin is the layer of usually soft, flexible outer tissue covering the body of a vertebrate animal, with three main functions: protection, regulation, and sensation. Other animal coverings, such as the arthropod exoskeleton, have different de ...
on the back. In addition, the somites specify the migration paths of
neural crest Neural crest cells are a temporary group of cells unique to vertebrates that arise from the embryonic ectoderm germ layer, and in turn give rise to a diverse cell lineage—including melanocytes, craniofacial cartilage and bone, smooth muscle, per ...
cells and the
axon An axon (from Greek ἄξων ''áxōn'', axis), or nerve fiber (or nerve fibre: see spelling differences), is a long, slender projection of a nerve cell, or neuron, in vertebrates, that typically conducts electrical impulses known as action p ...
s of spinal nerves. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. The lower half of one sclerotome fuses with the upper half of the adjacent one to form each vertebral body. Walker, Warren F., Jr. (1987) ''Functional Anatomy of the Vertebrate'' San Francisco: Saunders College Publishing. From this vertebral body, sclerotome cells move dorsally and surround the developing
spinal cord The spinal cord is a long, thin, tubular structure made up of nervous tissue, which extends from the medulla oblongata in the brainstem to the lumbar region of the vertebral column (backbone). The backbone encloses the central canal of the sp ...
, forming the vertebral arch. Other cells move distally to the costal processes of thoracic vertebrae to form the ribs.


In arthropods

In crustacean development, a somite is a segment of the hypothetical primitive crustacean body plan. In current crustaceans, several of those somites may be fused.


See also

*Developmental biology


References


External links

* {{Authority control Embryology