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Phytopathology
Plant pathology (also phytopathology) is the scientific study of diseases in plants caused by pathogens (infectious organisms) and environmental conditions (physiological factors). Organisms that cause infectious disease include fungi, oomycetes, bacteria, viruses, viroids, virus-like organisms, phytoplasmas, protozoa, nematodes and parasitic plants. Not included are ectoparasites like insects, mites, vertebrate, or other pests that affect plant health by eating plant tissues. Plant pathology also involves the study of pathogen identification, disease etiology, disease cycles, economic impact, plant disease epidemiology, plant disease resistance, how plant diseases affect humans and animals, pathosystem genetics, and management of plant diseases. Overview Control of plant diseases is crucial to the reliable production of food, and it provides significant problems in agricultural use of land, water, fuel and other inputs. Plants in both natural and cultivated popu ...
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Plant Disease Resistance
Plant disease resistance protects plants from pathogens in two ways: by pre-formed structures and chemicals, and by infection-induced responses of the immune system. Relative to a susceptible plant, disease resistance is the reduction of pathogen growth on or in the plant (and hence a reduction of disease), while the term disease tolerance describes plants that exhibit little disease damage despite substantial pathogen levels. Disease outcome is determined by the three-way interaction of the pathogen, the plant and the environmental conditions (an interaction known as the disease triangle). Defense-activating compounds can move cell-to-cell and systematically through the plant's vascular system. However, plants do not have circulating immune cells, so most cell types exhibit a broad suite of antimicrobial defenses. Although obvious ''qualitative'' differences in disease resistance can be observed when multiple specimens are compared (allowing classification as “resistant” or ...
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Phytoplasmas
Phytoplasmas are obligate intracellular parasites of plant phloem tissue and of the insect vectors that are involved in their plant-to-plant transmission. Phytoplasmas were discovered in 1967 by Japanese scientists who termed them mycoplasma-like organisms. Since their discovery, phytoplasmas have resisted all attempts at ''in vitro'' culture in any cell-free medium; routine cultivation in an artificial medium thus remains a major challenge. Phytoplasmas are characterized by the lack of a cell wall, a pleiomorphic or filamentous shape, a diameter normally less than 1 μm, and a very small genome. Phytoplasmas are pathogens of agriculturally important plants, including coconut, sugarcane, and sandalwood, in which they cause a wide variety of symptoms ranging from mild yellowing to death. Phytoplasmas are most prevalent in tropical and subtropical regions. They are transmitted from plant to plant by vectors (normally sap-sucking insects such as leafhoppers) in which they both surv ...
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Plant Disease Epidemiology
Plant disease epidemiology is the study of disease in plant populations. Much like diseases of humans and other animals, plant diseases occur due to pathogens such as bacteria, viruses, fungi, oomycetes, nematodes, phytoplasmas, protozoa, and parasitic plants. Plant disease epidemiologists strive for an understanding of the cause and effects of disease and develop strategies to intervene in situations where crop losses may occur. Destructive and non-destructive methods are used to detect diseases in plants. Additionally, understanding the responses of the immune system in plants will further benefit and limit the loss of crops. Typically successful intervention will lead to a low enough level of disease to be acceptable, depending upon the value of the crop. Plant disease epidemiology is often looked at from a multi-disciplinary approach, requiring biological, statistical, agronomic and ecological perspectives. Biology is necessary for understanding the pathogen and its life ...
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Plant Virus
Plant viruses are viruses that affect plants. Like all other viruses, plant viruses are obligate intracellular parasites that do not have the molecular machinery to replicate without a host. Plant viruses can be pathogenic to higher plants. Most plant viruses are rod-shaped, with protein discs forming a tube surrounding the viral genome; isometric particles are another common structure. They rarely have an envelope. The great majority have an RNA genome, which is usually small and single stranded (ss), but some viruses have double-stranded (ds) RNA, ssDNA or dsDNA genomes. Although plant viruses are not as well understood as their animal counterparts, one plant virus has become very recognizable: '' tobacco mosaic virus'' (TMV), the first virus to be discovered. This and other viruses cause an estimated US$60 billion loss in crop yields worldwide each year. Plant viruses are grouped into 73 genera and 49 families. However, these figures relate only to cultivated plants, whic ...
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Viroid
Viroids are small single-stranded, circular RNAs that are infectious pathogens. Unlike viruses, they have no protein coating. All known viroids are inhabitants of angiosperms (flowering plants), and most cause diseases, whose respective economic importance to humans varies widely. The first discoveries of viroids in the 1970s triggered the historically third major extension of the biosphere—to include smaller lifelike entities —after the discoveries in 1675 by Antonie van Leeuwenhoek (of the "subvisible" microorganisms) and in 1892–1898 by Dmitri Iosifovich Ivanovsky and Martinus Beijerinck (of the "submicroscopic" viruses). The unique properties of viroids have been recognized by the International Committee on Taxonomy of Viruses, in creating a new order of subviral agents. The first recognized viroid, the pathogenic agent of the potato spindle tuber disease, was discovered, initially molecularly characterized, and named by Theodor Otto Diener, plant pathologist a ...
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Chestnut Blight
The pathogenic fungus ''Cryphonectria parasitica'' (formerly ''Endothia parasitica'') is a member of the Ascomycota (sac fungi). This necrotrophic fungus is native to East Asia and South East Asia and was introduced into Europe and North America in the early 1900s. The fungus spread rapidly and caused significant tree loss in both regions. Overview ''Cryphonectria parasitica'' is a parasitic fungus of chestnut trees. This disease came to be known as chestnut blight. Naturally found in South East Asia, accidental introductions led to invasive populations of ''C. parasitica'' in North America and Europe. The fungal disease has had a devastating economic and social impact on communities in the eastern United States. In the first half of the 20th century it killed an estimated four billion trees; or, by another count, 3.5 billion trees through 2013. Less severe impacts have occurred in Europe due to widespread CHV1-induced ''hypovirulence''. CHV1 is one of at least two viral pathog ...
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Pathogen
In biology, a pathogen ( el, πάθος, "suffering", "passion" and , "producer of") in the oldest and broadest sense, is any organism or agent that can produce disease. A pathogen may also be referred to as an infectious agent, or simply a germ. The term ''pathogen'' came into use in the 1880s. Typically, the term ''pathogen'' is used to describe an ''infectious'' microorganism or agent, such as a virus, bacterium, protozoan, prion, viroid, or fungus. Small animals, such as helminths and insects, can also cause or transmit disease. However, these animals are usually referred to as parasites rather than pathogens. The scientific study of microscopic organisms, including microscopic pathogenic organisms, is called microbiology, while parasitology refers to the scientific study of parasites and the organisms that host them. There are several pathways through which pathogens can invade a host. The principal pathways have different episodic time frames, but soil has the ...
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Fungus
A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from the other eukaryotic kingdoms, which by one traditional classification include Plantae, Animalia, Protozoa, and Chromista. A characteristic that places fungi in a different kingdom from plants, bacteria, and some protists is chitin in their cell walls. Fungi, like animals, are heterotrophs; they acquire their food by absorbing dissolved molecules, typically by secreting digestive enzymes into their environment. Fungi do not photosynthesize. Growth is their means of mobility, except for spores (a few of which are flagellated), which may travel through the air or water. Fungi are the principal decomposers in ecological systems. These and other differences place fungi in a single group of related organisms, named the ''Eumycota'' (''tru ...
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Soybean Cyst Nematode
The soybean cyst nematode (SCN), ''Heterodera glycines'', is the most devastating pest to soybean crop yields in the U.S., targeting the roots of soybean and other legume plants. When infection is severe SCNs cause stunting, yellowing, impaired canopy development, and yield loss. The symptoms caused by SCNs can go easily unrecognized by farmers—in some cases there are no warning symptoms before a loss of 30% of the yield.“You can literally have 40% yield loss with no symptoms,” says Greg Tylka, Iowa State University (ISU) Extension nematologist. Due to the slight stunting and yellowing, many farmers may mistake these symptoms as environmental problems when in fact they are SCNs. Another symptom of SCNs that may affect farmers' yields is stunted roots with fewer nitrogen-fixing nodules. Due to the fact that soybean cyst nematodes can only move a few centimeters in the soil by themselves, they mostly are spread via tillage or plant transplants. This area of infection will look ...
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Rice Blast
''Magnaporthe grisea'', also known as rice blast fungus, rice rotten neck, rice seedling blight, blast of rice, oval leaf spot of graminea, pitting disease, ryegrass blast, Johnson spot, neck blast, wheat blast, and Imochi (Japanese:稲熱) is a plant-pathogenic fungus and model organism that causes a serious disease affecting rice. It is now known that ''M. grisea'' consists of a cryptic species complex containing at least two biological species that have clear genetic differences and do not interbreed. Complex members isolated from ''Digitaria'' have been more narrowly defined as ''M. grisea''. The remaining members of the complex isolated from rice and a variety of other hosts have been renamed ''Magnaporthe oryzae'', within the same ''M. grisea'' complex. Confusion on which of these two names to use for the rice blast pathogen remains, as both are now used by different authors. Members of the ''Magnaporthe grisea'' complex can also infect other agriculturally important cereal ...
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Pathosystem
A pathosystem is a subsystem of an ecosystem and is defined by the phenomenon of parasitism. A plant pathosystem is one in which the host species is a plant. The parasite is any species in which the individual spends a significant part of its lifespan inhabiting one host individual and obtaining nutrients from it. The parasite may thus be an insect, mite, nematode, parasitic Angiosperm, fungus, bacterium, mycoplasma, virus or viroid. Other consumers, however, such as mammalian and avian herbivores, which graze populations of plants, are normally considered to be outside the conceptual boundaries of the plant pathosystem. A host has the property of resistance to a parasite. And a parasite has the property of parasitic ability on a host. Parasitism is the interaction of these two properties. The main feature of the pathosystem concept is that it concerns parasitism, and it is not concerned with the study of either the host or parasite on its own. Another feature of the pathosystem co ...
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Disease Resistance
Disease resistance is the ability to prevent or reduce the presence of diseases in otherwise susceptible hosts. It can arise from genetic or environmental factors, such as incomplete penetrance. Disease tolerance is different as it is the ability of a host to limit the impact of disease on host health. In crops this includes plant disease resistance and can follow a gene-for-gene relationship. See also * Disease resistance in fruit and vegetables There are a number of lines of defence against pests (that, those animals that cause damage to the plants we grow) and diseases in the orchard, principal among these being the practice of good husbandry, creating healthy soil and ensuring high st ... * Disease resistance breeding References {{Reflist Diseases and disorders ...
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