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Humic substances (HS) are
organic compound In chemistry, organic compounds are generally any chemical compounds that contain carbon-hydrogen or carbon-carbon bonds. Due to carbon's ability to catenate (form chains with other carbon atoms), millions of organic compounds are known. Th ...
s that are important components of
humus In classical soil science, humus is the dark organic matter in soil that is formed by the decomposition of plant and animal matter. It is a kind of soil organic matter. It is rich in nutrients and retains moisture in the soil. Humus is the Lati ...
, the major
organic Organic may refer to: * Organic, of or relating to an organism, a living entity * Organic, of or relating to an anatomical organ Chemistry * Organic matter, matter that has come from a once-living organism, is capable of decay or is the product ...
fraction of
soil Soil, also commonly referred to as earth or dirt, is a mixture of organic matter, minerals, gases, liquids, and organisms that together support life. Some scientific definitions distinguish ''dirt'' from ''soil'' by restricting the former ...
,
peat Peat (), also known as turf (), is an accumulation of partially Decomposition, decayed vegetation or organic matter. It is unique to natural areas called peatlands, bogs, mires, Moorland, moors, or muskegs. The peatland ecosystem covers and ...
, and
coal Coal is a combustible black or brownish-black sedimentary rock, formed as rock strata called coal seams. Coal is mostly carbon with variable amounts of other elements, chiefly hydrogen, sulfur, oxygen, and nitrogen. Coal is formed when ...
(and also a constituent of many upland
streams A stream is a continuous body of surface water flowing within the bed and banks of a channel. Depending on its location or certain characteristics, a stream may be referred to by a variety of local or regional names. Long large streams a ...
, dystrophic lakes, and
ocean The ocean (also the sea or the world ocean) is the body of salt water that covers approximately 70.8% of the surface of Earth and contains 97% of Earth's water. An ocean can also refer to any of the large bodies of water into which the wor ...
water Water (chemical formula ) is an inorganic, transparent, tasteless, odorless, and nearly colorless chemical substance, which is the main constituent of Earth's hydrosphere and the fluids of all known living organisms (in which it acts as ...
). For a long era in the 19th and 20th centuries, humic substances were often viewed through a lens of acid–base theory that described humic acids (HA), as
organic acid An organic acid is an organic compound with acidic properties. The most common organic acids are the carboxylic acids, whose acidity is associated with their carboxyl group –COOH. Sulfonic acids, containing the group –SO2OH, are ...
s, and their conjugate bases, humates, as important components of
organic matter Organic matter, organic material, or natural organic matter refers to the large source of carbon-based compounds found within natural and engineered, terrestrial, and aquatic environments. It is matter composed of organic compounds that have c ...
. Through this viewpoint humic acids were defined as organic substances extracted from
soil Soil, also commonly referred to as earth or dirt, is a mixture of organic matter, minerals, gases, liquids, and organisms that together support life. Some scientific definitions distinguish ''dirt'' from ''soil'' by restricting the former ...
that coagulate (form small solid pieces) when a strong-base extract is acidified, whereas fulvic acids (FA) are organic acids that remain soluble (stay dissolved) when a strong-base extract is acidified. The remaining alkali-insoluble part of humus would be termed humin. Humic matter in isolation is the result of a chemical extraction from the
soil organic matter Soil organic matter (SOM) is the organic matter component of soil, consisting of plant and animal detritus at various stages of decomposition, cells and tissues of soil microbes, and substances that soil microbes synthesize. SOM provides numerous b ...
or the dissolved organic matter and represent the humic molecules distributed in the soil or water. A new understanding views humic substances not as high-molecular-weight macropolymers but as heterogeneous and relatively small molecular components of the soil organic matter auto-assembled in supramolecular associations and composed of a variety of compounds of biological origin and synthesized by abiotic and biotic reactions in soil. It is the large molecular complexity of the soil humeome that confers to humic matter its bioactivity in soil and its role as plant growth promoter. The academic definition of humic substances is under debate as "humification" becomes unsupported as a special case, leading to some radical definitions expanding HS to encompass all difficult-to-characterize
soil organic matter Soil organic matter (SOM) is the organic matter component of soil, consisting of plant and animal detritus at various stages of decomposition, cells and tissues of soil microbes, and substances that soil microbes synthesize. SOM provides numerous b ...
, at the cost of clarity. There is also a call to forgo the traditional alkali extract method and directly analyze the soil, but its complexity prevents widespread adoption in agriculture. In practice, this means some sources may apply a traditional acid-base analysis to
compost Compost is a mixture of ingredients used as plant fertilizer and to improve soil's physical, chemical and biological properties. It is commonly prepared by decomposing plant, food waste, recycling organic materials and manure. The resulting ...
, then state the results in term of "humic substances".


Traditional view of formation and description

The formation of humic substances in nature is one of the least understood aspects of humus chemistry and one of the most intriguing. There are three main theories to explain it: the lignin theory of Waksman (1932), the polyphenol theory, and the sugar-amine condensation theory of Maillard (1911). Those theories are insufficient to account for observations in soil research. Humic substances are formed by the microbial degradation of dead plant matter, such as
lignin Lignin is a class of complex organic polymers that form key structural materials in the support tissues of most plants. Lignins are particularly important in the formation of cell walls, especially in wood and bark, because they lend rigidity a ...
and
charcoal Charcoal is a lightweight black carbon residue produced by strongly heating wood (or other animal and plant materials) in minimal oxygen to remove all water and volatile constituents. In the traditional version of this pyrolysis process, ...
. Humic substances in the lab are very resistant to further biodegradation. The precise properties and structure of a given sample depend on the water or soil source and the specific conditions of extraction. Nevertheless, the average properties of lab produced humic substances from different sources are remarkably similar.


Fractionation

Humic substances in soils and sediments can be divided into three main fractions: humic acids, fulvic acids, and humin. Their presence and relative abundance is inferred by lab extraction, a process which alters their original form beyond recognition. * The humic and fulvic acids are extracted as a colloidal sol from soil and other solid phase sources into a strongly basic aqueous solution of
sodium hydroxide Sodium hydroxide, also known as lye and caustic soda, is an inorganic compound with the formula NaOH. It is a white solid ionic compound consisting of sodium cations and hydroxide anions . Sodium hydroxide is a highly caustic base and al ...
or
potassium hydroxide Potassium hydroxide is an inorganic compound with the formula K OH, and is commonly called caustic potash. Along with sodium hydroxide (NaOH), KOH is a prototypical strong base. It has many industrial and niche applications, most of which exp ...
. ** Humic acids are precipitated from this solution by adjusting the pH to 1 with
hydrochloric acid Hydrochloric acid, also known as muriatic acid, is an aqueous solution of hydrogen chloride. It is a colorless solution with a distinctive pungent smell. It is classified as a strong acid. It is a component of the gastric acid in the dige ...
. *** The alcohol-soluble portion of the humic fraction is, in general, named ''ulmic acid''. *** So-called "gray humic acids" (GHA) are soluble in low-ionic-strength alkaline media. *** "Brown humic acids" (BHA) are soluble in alkaline conditions independent of ionic strength. ** The fulvic acids is left in solution at pH 1. They remain soluble independent of pH and ionic strength. * Humin are insoluble in dilute alkali. Humic acid as traditionally produced in a laboratory is not a single
acid In computer science, ACID ( atomicity, consistency, isolation, durability) is a set of properties of database transactions intended to guarantee data validity despite errors, power failures, and other mishaps. In the context of databases, a se ...
; rather, it is a complex mixture of many different acids containing carboxyl and
phenol Phenol (also called carbolic acid) is an aromatic organic compound with the molecular formula . It is a white crystalline solid that is volatile. The molecule consists of a phenyl group () bonded to a hydroxy group (). Mildly acidic, it r ...
ate groups so that the mixture behaves functionally as a dibasic acid or, occasionally, as a tribasic acid. Humic acid used to amend soil is manufactured using these same well established procedures. Humic acids can form complexes with ions that are commonly found in the environment creating humic
colloid A colloid is a mixture in which one substance consisting of microscopically dispersed insoluble particles is suspended throughout another substance. Some definitions specify that the particles must be dispersed in a liquid, while others extend ...
s. As a nutrition supplement, fulvic acid can be found in a liquid form as a component of mineral colloids. Fulvic acids are poly-electrolytes and are unique
colloid A colloid is a mixture in which one substance consisting of microscopically dispersed insoluble particles is suspended throughout another substance. Some definitions specify that the particles must be dispersed in a liquid, while others extend ...
s that diffuse easily through membranes whereas all other colloids do not. A sequential chemical fractionation called Humeomics can be used to isolate more homogeneous humic fractions and determine their molecular structures by advanced spectroscopic and chromatographic methods. Substances identified in humic extracts and directly in soil include mono-, di-, and tri- hydroxycarboxylic acids,
fatty acid In chemistry, particularly in biochemistry, a fatty acid is a carboxylic acid with an aliphatic chain, which is either saturated or unsaturated. Most naturally occurring fatty acids have an unbranched chain of an even number of carbon atoms, f ...
s, dicarboxylic acids, linear alcohols, phenolic acids, terpenoids, carbohydrates and aminoacids.


Criticism

Decomposition products of dead plant materials form intimate associations with minerals, making it difficult to isolate and characterize soil organic constituents. 18th century soil chemists successfully used alkaline extraction to isolate a portion of the organic constituents in soil. This led to the theory that a 'humification' process created 'humic substances'; most commonly 'humic acid', 'fulvic acid', and 'humin'. However, these humic substances have not been observed in soil. Although 'humification' theory is unsupported by evidence, "the underlying theory persists in the contemporary literature, including current textbooks." Attempts to redefine 'humic substances' in valid terms have resulted in a proliferation of incompatible definitions, "with far-reaching implications beyond our ability to communicate scientifically accurate soil processes and properties."


Chemical characteristics


In nature

Since the dawn of modern chemistry, humic substances are among the most studied among the natural materials. Despite long study, their molecular structure and chemical remains elusive. The traditional view is that humic substances are heteropolycondensates, in varying associations with clay. A more recent view is that relatively small molecules also play a role. Humic substances account for 50 – 90% of cation exchange capacity. Similar to clay, char and colloidal humus hold cation nutrients.


In traditional, base-soluble extracts

A typical humic substance is a mixture of many molecules, some of which are based on a motif of
aromatic In chemistry, aromaticity is a chemical property of cyclic ( ring-shaped), ''typically'' planar (flat) molecular structures with pi bonds in resonance (those containing delocalized electrons) that gives increased stability compared to satur ...
nuclei with
phenol Phenol (also called carbolic acid) is an aromatic organic compound with the molecular formula . It is a white crystalline solid that is volatile. The molecule consists of a phenyl group () bonded to a hydroxy group (). Mildly acidic, it r ...
ic and carboxylic substituents, linked together; the illustration shows a typical structure. The functional groups that contribute most to surface charge and reactivity of humic substances are phenolic and carboxylic groups. Humic acids behave as mixtures of dibasic acids, with a pK1 value around 4 for
protonation In chemistry, protonation (or hydronation) is the adding of a proton (or hydron, or hydrogen cation), (H+) to an atom, molecule, or ion, forming a conjugate acid. (The complementary process, when a proton is removed from a Brønsted–Lowry acid ...
of carboxyl groups and around 8 for protonation of phenolate groups. There is considerable overall similarity among individual humic acids. For this reason, measured pK values for a given sample are average values relating to the constituent species. The other important characteristic is
charge density In electromagnetism, charge density is the amount of electric charge per unit length, surface area, or volume. Volume charge density (symbolized by the Greek letter ρ) is the quantity of charge per unit volume, measured in the SI system i ...
. The molecules may form a supramolecular structure held together by
non-covalent In chemistry, a non-covalent interaction differs from a covalent bond in that it does not involve the sharing of electrons, but rather involves more dispersed variations of electromagnetic interactions between molecules or within a molecule. Th ...
forces, such as
van der Waals force In molecular physics, the van der Waals force is a distance-dependent interaction between atoms or molecules. Unlike ionic or covalent bonds, these attractions do not result from a chemical electronic bond; they are comparatively weak and ...
, π-π, and CH-π bonds. The presence of carboxylate and phenolate groups gives the humic acids the ability to form complexes with ions such as Mg2+, Ca2+, Fe2+, and Fe3+. Many humic acids have two or more of these groups arranged so as to enable the formation of chelate complexes. The formation of (chelate) complexes is an important aspect of the biological role of humic acids in regulating bioavailability of metal ions.


Determination of humic acids in water samples

The presence of humic acid in water intended for potable or industrial use can have a significant impact on the treatability of that water and the success of chemical disinfection processes. For instance, humic and fulvic acids can react with the chemicals used in the chlorination process to form disinfection byproducts such as dihaloacetonitriles, which are toxic to humans. Accurate methods of establishing humic acid concentrations are therefore essential in maintaining water supplies, especially from upland
peat Peat (), also known as turf (), is an accumulation of partially Decomposition, decayed vegetation or organic matter. It is unique to natural areas called peatlands, bogs, mires, Moorland, moors, or muskegs. The peatland ecosystem covers and ...
y catchments in temperate climates. As a lot of different bio-organic molecules in very diverse physical associations are mixed together in natural environments, it is cumbersome to measure their exact concentrations in the humic superstructure. For this reason, concentrations of humic acid are traditionally estimated out of concentrations of organic matter, typically from concentrations of total organic carbon (TOC) or dissolved organic carbon (DOC). Extraction procedures are bound to alter some of the chemical linkages present in the soil humic substances (mainly ester bonds in biopolyesters such as cutins and suberins). The humic extracts are composed of large numbers of different bio-organic molecules that have not yet been totally separated and identified. However, single classes of residual biomolecules have been identified by selective extractions and chemical fractionation, and are represented by alkanoic and hydroxy alkanoic acids, resins, waxes, lignin residues, sugars, and peptides.


Ecological effects

Organic matter soil amendments have been known by farmers to be beneficial to plant growth for longer than recorded history. However, the chemistry and function of the organic matter have been a subject of controversy since humans began postulating about it in the 18th century. Until the time of
Liebig Justus Freiherr von Liebig (12 May 1803 – 20 April 1873) was a German scientist who made major contributions to agricultural and biological chemistry, and is considered one of the principal founders of organic chemistry. As a professor at t ...
, it was supposed that humus was used directly by plants, but, after Liebig showed that plant growth depends upon inorganic compounds, many soil scientists held the view that organic matter was useful for fertility only as it was broken down with the release of its constituent
nutrient A nutrient is a substance used by an organism to survive, grow, and reproduce. The requirement for dietary nutrient intake applies to animals, plants, fungi, and protists. Nutrients can be incorporated into cells for metabolic purposes or excre ...
elements into inorganic forms. At the present time, soil scientists hold a more holistic view and at least recognize that humus influences
soil fertility Soil fertility refers to the ability of soil to sustain agricultural plant growth, i.e. to provide plant habitat and result in sustained and consistent yields of high quality.
through its effect on the water-holding capacity of the soil. Also, since plants have been shown to absorb and translocate the complex organic molecules of systemic insecticides, they can no longer discredit the idea that plants may be able to absorb the soluble forms of humus; this may in fact be an essential process for the uptake of otherwise insoluble iron oxides. A study on the effects of humic acid on plant growth was conducted at Ohio State University which said in part "humic acids increased plant growth" and that there were "relatively large responses at low application rates". A 1998 study by scientists at the North Carolina State University College of Agriculture and Life Sciences showed that addition of humate to soil significantly increased root mass in creeping bentgrass turf. A 2018 study by scientists at the University of Alberta showed that humic acids can reduce
prion Prions are misfolded proteins that have the ability to transmit their misfolded shape onto normal variants of the same protein. They characterize several fatal and transmissible neurodegenerative diseases in humans and many other animals. It i ...
infectivity in laboratory experiments, but that this effect may be uncertain in the environment due to minerals in the soil that buffer the effect.


Anthropogenic production

Humans can affect the production of humic substances via a variety of ways: by making use of natural processes by
composting Compost is a mixture of ingredients used as plant fertilizer and to improve soil's physical, chemical and biological properties. It is commonly prepared by decomposing plant, food waste, recycling organic materials and manure. The resulting ...
lignin Lignin is a class of complex organic polymers that form key structural materials in the support tissues of most plants. Lignins are particularly important in the formation of cell walls, especially in wood and bark, because they lend rigidity a ...
or adding biochar (see soil rehabilitation), or by industrial synthesis of artificial humic substances from organic feedstocks directly. These artificial substances may be similarly divided into artificial humic acid (A-HA) and artificial fulvic acid (A-FA).
Lignosulfonate Lignosulfonates (LS) are water-soluble anionic polyelectrolyte polymers: they are byproducts from the production of wood pulp using sulfite pulping. Most delignification in sulfite pulping involves acidic cleavage of ether bonds, which connect ...
from sulfite pulping can be made to mimic humus by hydrolysis and oxidation. The product is already commercialized as "lignohumate". Agricultural litter can be turned into an artificial humic substance by a hydrothermal reaction. The resulting mixture can increase the content of dissolved organic matter and total organic carbon in soil.
Lignite Lignite, often referred to as brown coal, is a soft, brown, combustible, sedimentary rock formed from naturally compressed peat. It has a carbon content around 25–35%, and is considered the lowest rank of coal due to its relatively low heat ...
(brown coal) may also be oxidized to produce humic substances, reversing the process of coal formation. This form of "mineral-derived fulvic acid" is widely used in China. This process also occurs in nature, producing leonardite.Youngs, R.W. & Frost, C.M. 1963. Humic acids from leonardite – a soil conditioner and organic fertilizer. Ind. Eng. Chem., 55, 95–99
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Economic geology

In
economic geology Economic geology is concerned with earth materials that can be used for economic and/or industrial purposes. These materials include precious and base metals, nonmetallic minerals and construction-grade stone. Economic geology is a subdisciplin ...
, the term ''humate'' refers to geological materials, such as weathered
coal Coal is a combustible black or brownish-black sedimentary rock, formed as rock strata called coal seams. Coal is mostly carbon with variable amounts of other elements, chiefly hydrogen, sulfur, oxygen, and nitrogen. Coal is formed when ...
beds (leonardite),
mudrock Mudrocks are a class of fine-grained siliciclastic sedimentary rocks. The varying types of mudrocks include siltstone, claystone, mudstone, slate, and shale. Most of the particles of which the stone is composed are less than and are too ...
, or pore material in
sandstone Sandstone is a clastic sedimentary rock composed mainly of sand-sized (0.0625 to 2 mm) silicate grains. Sandstones comprise about 20–25% of all sedimentary rocks. Most sandstone is composed of quartz or feldspar (both silicat ...
s, that are rich in humic acids. Humate has been mined from the Fruitland Formation of New Mexico for use as a
soil amendment A soil conditioner is a product which is added to soil to improve the soil’s physical qualities, usually its fertility (ability to provide nutrition for plants) and sometimes its mechanics. In general usage, the term "soil conditioner" is often ...
since the 1970s, with nearly 60,000 metric tons produced by 2016. Humate deposits may also play an important role in the genesis of uranium ore bodies.


Technological applications

The heavy-metal binding abilities of humic acids have been exploited to develop remediation technologies for removing heavy metals from waste water. To this end, Yurishcheva et al. coated magnetic nanoparticles with humic acids. After capturing lead ions, the nanoparticles can then be captured using a magnet.


Ancient masonry

Archeology Archaeology or archeology is the scientific study of human activity through the recovery and analysis of material culture. The archaeological record consists of Artifact (archaeology), artifacts, architecture, biofact (archaeology), biofacts ...
finds that ancient Egypt used
mudbrick A mudbrick or mud-brick is an air-dried brick, made of a mixture of loam, mud, sand and water mixed with a binding material such as rice husks or straw. Mudbricks are known from 9000 BCE, though since 4000 BCE, bricks have also been ...
s reinforced with
straw Straw is an agricultural byproduct consisting of the dry stalks of cereal plants after the grain and chaff have been removed. It makes up about half of the yield of cereal crops such as barley, oats, rice, rye and wheat. It has a number ...
and humic acids.


See also

*
Humus In classical soil science, humus is the dark organic matter in soil that is formed by the decomposition of plant and animal matter. It is a kind of soil organic matter. It is rich in nutrients and retains moisture in the soil. Humus is the Lati ...
*
Soil Soil, also commonly referred to as earth or dirt, is a mixture of organic matter, minerals, gases, liquids, and organisms that together support life. Some scientific definitions distinguish ''dirt'' from ''soil'' by restricting the former ...
* Humin * Polycyclic aromatic hydrocarbon


References


External links


Supramolecular Humic Systems in the Environment
(In English, original is Italian)


Further reading

* *Sillanpää, M. (Ed.) Natural Organic Matter in Water, Characterization and Treatment Methods {{Authority control Composting Organic acids Soil chemistry