Vishva Dixit
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Vishva Mitra Dixit (born ) is a Kenyan-American physician who is currently Vice President and Senior Fellow of Physiological Chemistry and Research Biology at
Genentech Genentech, Inc. is an American biotechnology corporation headquartered in South San Francisco, California. It operates as an independent subsidiary of holding company Roche. Genentech Research and Early Development operates as an independent cent ...
.


Early life and education

Vishva Dixit was born in Kenya in 1956. His parents were both physicians, working for the British colonial authorities. Dixit was interested in science from an early age, and his parents encouraged him to pursue a career in medicine. He graduated in 1980 from the University of Nairobi with a Bachelor of Medicine and Bachelor of Surgery, becoming a medical doctor.


Career


Academia

Following medical school, Dixit completed a residency in the Department of Pathology at the
Washington University School of Medicine Washington University School of Medicine (WashU Medicine) is the medical school of Washington University in St. Louis, located in the Central West End neighborhood of St. Louis, Missouri. Founded in 1891, the School of Medicine shares a ca ...
. He decided to pursue pathology because he had been interested in the process of death since childhood and pathology offered more research options across medical disciplines. Encouraged to train in research as part of the residency program, Dixit found a position in the lab of biochemistry professor William Frazier and became involved in a project on
thrombospondin Thrombospondins (TSPs) are a family of secreted glycoproteins with antiangiogenic functions. Due to their dynamic role within the extracellular matrix they are considered matricellular proteins. The first member of the family, thrombospondin 1 ...
, a protein in the
extracellular matrix In biology, the extracellular matrix (ECM), also called intercellular matrix (ICM), is a network consisting of extracellular macromolecules and minerals, such as collagen, enzymes, glycoproteins and hydroxyapatite that provide structural and bio ...
. The project's success a few years later resulted in a number of publications. Congruent with his research, Dixit chose to specialize in hemostasis and thrombosis during his last year of clinical training. In 1986 he joined the
University of Michigan Medical School The University of Michigan Medicine (branded as Michigan Medicine) is the academic medical center of the University of Michigan, a public research university in Ann Arbor, Michigan. It consists of the university's Medical School, affiliated hos ...
Department of Pathology as an assistant professor, eventually becoming a full professor. During his early years as an assistant professor, Dixit's research focused on
thrombospondin Thrombospondins (TSPs) are a family of secreted glycoproteins with antiangiogenic functions. Due to their dynamic role within the extracellular matrix they are considered matricellular proteins. The first member of the family, thrombospondin 1 ...
. In 1994 his interests shifted and he began to reorient his research to cell death.


Genentech

In 1997, Dixit became the Director of Molecular Oncology at Genentech. In 2009 he led the Department of Physiological Chemistry. As of 2016 he held the position of Vice President of Discovery Research, and oversaw Genentech's postdoctoral program.


Notable research discoveries

As one of the world's most cited scientists, some of Dixit's publications have garnered more than 2,000 citations. He was the second most highly cited scientist in the world in 1996. His lab's discovery of
MyD88 Myeloid differentiation primary response 88 (MYD88) is a protein that, in humans, is encoded by the ''MYD88'' gene. originally discovered in the laboratory of Dan A. Liebermann (Lord et al. Oncogene 1990) as a Myeloid differentiation primary resp ...
(25) as a central conduit for signals emanating from the
interleukin-1 receptor Interleukin-1 receptor (IL-1R) is a cytokine receptor which binds interleukin 1. Two forms of the receptor exist. The type I receptor is primarily responsible for transmitting the inflammatory effects of interleukin-1 (IL-1) while type II ...
is considered as one of the “Pillars in Immunology” by the ''
Journal of Immunology The ''Journal of Immunology'' is a biweekly peer-reviewed medical journal that publishes basic and clinical studies in all aspects of immunology. Established in 1916, it changed its name to ''Journal of Immunology, Virus Research and Experimental C ...
''. Dixit's papers, including his work on apoptosis and inflammation, have been designated “hot papers” on multiple occasions by ''The Scientist''. This designation signifies emerging work that has a disproportionate impact on a field. His research on
apoptosis Apoptosis (from ) is a form of programmed cell death that occurs in multicellular organisms and in some eukaryotic, single-celled microorganisms such as yeast. Biochemistry, Biochemical events lead to characteristic cell changes (Morphology (biol ...
(programmed cell death) is now commonly found in introductory textbooks in both biology and medicine.


Early research on thrompospondin

While at the University of Michigan, he received funding from the
National Institutes of Health The National Institutes of Health (NIH) is the primary agency of the United States government responsible for biomedical and public health research. It was founded in 1887 and is part of the United States Department of Health and Human Service ...
to support research into thrombospondin, as his laboratory had shown this protein had a role in promoting cancer metastases.


Caspases and apoptosis

In 1991, an article in ''
Scientific American ''Scientific American'', informally abbreviated ''SciAm'' or sometimes ''SA'', is an American popular science magazine. Many scientists, including Albert Einstein and Nikola Tesla, have contributed articles to it, with more than 150 Nobel Pri ...
'' inspired Dixit to study how
tumor necrosis factor Tumor necrosis factor (TNF), formerly known as TNF-α, is a chemical messenger produced by the immune system that induces inflammation. TNF is produced primarily by activated macrophages, and induces inflammation by binding to its receptors o ...
s, which are responsible for the regulation of immune cells, trigger inflammation and
cell death Cell death is the event of a biological cell ceasing to carry out its functions. This may be the result of the natural process of old cells dying and being replaced by new ones, as in programmed cell death, or may result from factors such as di ...
. Dixit switched research tracks and began investigating cell death mechanisms. The research identified each component of the cell-death pathway and explained how they were all connected. In 1996, he published the first evidence that death receptors engaged a mammalian deathase, a molecular scissors (
protease A protease (also called a peptidase, proteinase, or proteolytic enzyme) is an enzyme that catalysis, catalyzes proteolysis, breaking down proteins into smaller polypeptides or single amino acids, and spurring the formation of new protein products ...
) that cleaves proteins. His team's work on death receptor-induced apoptosis was notable, for prior to that time,
cell surface receptor Cell surface receptors (membrane receptors, transmembrane receptors) are receptors that are embedded in the plasma membrane of cells. They act in cell signaling by receiving (binding to) extracellular molecules. They are specialized integra ...
s were thought to signal by functioning as
ion channel Ion channels are pore-forming membrane proteins that allow ions to pass through the channel pore. Their functions include establishing a resting membrane potential, shaping action potentials and other electrical signals by Gating (electrophysiol ...
s or altering intracellular
phosphorylation In biochemistry, phosphorylation is described as the "transfer of a phosphate group" from a donor to an acceptor. A common phosphorylating agent (phosphate donor) is ATP and a common family of acceptor are alcohols: : This equation can be writ ...
. Death receptors, however, signal by a different mechanism—activation of a death protease. Collaborating with Guy Salvesen's group at the Burnham Institute, Dixit's group proposed the model of proximity-induced autoactivation in 1998 to explain how the first proteolytic signal is generated by caspase precursors recruited to death receptors.


RIP kinases, NF-κB signaling and necroptosis

At Genentech, Dixit formed a team with the goal of unraveling the complex interplay between cell death and inflammation at the molecular level. During his tenure, he has worked on the innate immune system, particularly its role in orchestrating an inflammatory response to fight pathogens and cancer. In 1999, his team discovered
RIPK2 Receptor-interacting serine/threonine-protein kinase 2 is an enzyme that in humans is encoded by the ''RIPK2'' gene. This gene encodes a member of the receptor-interacting protein (RIP) family of serine/threonine protein kinases. The encoded pro ...
and
RIPK3 Receptor-interacting serine/threonine-protein kinase 3 is an enzyme that is encoded by the ''RIPK3'' gene in humans. The product of this gene is a member of the receptor-interacting protein (RIP) family of serine/threonine protein kinases. It c ...
, which later were shown to be key mediators of
NF-κB Nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB) is a family of transcription factor protein complexes that controls transcription (genetics), transcription of DNA, cytokine production and cell survival. NF-κB is found i ...
signaling and
necroptosis Necroptosis is a programmed form of necrosis, or inflammatory cell death. Conventionally, necrosis is associated with unprogrammed cell death resulting from cellular damage or infiltration by pathogens, in contrast to orderly, programmed cell dea ...
, respectively. Incorrect regulation of NF-κB has been linked to cancer, inflammatory and autoimmune diseases, and improper immune development. Dixit's work contributed to the discovery of a core complex composed of three proteins that enabled antigen receptors to activate the canonical NF-κB pathway:
CARD11 Caspase recruitment domain-containing protein 11 also known as CARD-containing MAGUK protein 1 (Carma 1) is a protein in the CARD-CC protein family that in humans is encoded by the ''CARD11'' gene. CARD 11 is a membrane associated protein that i ...
,
BCL10 B-cell lymphoma/leukemia 10 is a protein that in humans is encoded by the ''BCL10'' gene. Like BCL2, BCL3, BCL5, BCL6, BCL7A, and BCL9, it has clinical significance in lymphoma. Function Bcl10 was identified by its translocation in a case o ...
and
MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 is a protein that in humans is encoded by the ''MALT1'' gene. It's the human paracaspase. Function Genetic ablation of the paracaspase gene in mice and biochemical studies h ...
/
paracaspase Paracaspases (human: MALT1) are members of the C14 family of cysteine proteases. Paracaspases are proteins related to caspases present in animals and slime mold, in contrast to metacaspases, which are present in plants, fungi, and "protists". The p ...
. Furthermore, he postulated a protease activity for MALT1, which plays a role in T cell activation and
MALT lymphoma MALT lymphoma (also called MALToma) is a form of lymphoma involving the mucosa-associated lymphoid tissue (MALT), frequently of the stomach, but virtually any mucosal site can be affected. It is a cancer originating from B cells in the marginal zon ...
s. His team described the family of
metacaspase Metacaspases are members of the C14 class of cysteine proteases and thus related to caspases, orthocaspases and paracaspases. The metacaspases are arginine/lysine-specific, in contrast to caspases, which are aspartate-specific. Structure and Phy ...
proteases in plants in a paper published in 2000. In a series of papers between 2016 and 2020, Dixit and his colleagues at Genentech also worked out the complex molecular mechanisms that regulate activity of
caspase-8 Caspase-8 is a caspase protein, encoded by the ''CASP8'' gene. It most likely acts upon caspase-3. ''CASP8'' orthologs have been identified in numerous mammals for which complete genome data are available. These unique orthologs are also present ...
, OTULIN,
RIPK1 Receptor-interacting serine/threonine-protein kinase 1 (RIPK1) functions in a variety of cellular pathways related to both cell survival and death. In terms of cell death, RIPK1 plays a role in apoptosis, necroptosis, and PANoptosis Some of th ...
, RIPK3 and other proteins that modulate inflammation, apoptosis and necroptosis signaling by death receptors and
TLRs Toll-like receptors (TLRs) are a class of proteins that play a key role in the innate immune system. They are single-spanning receptors usually expressed on sentinel cells such as macrophages and dendritic cells, that recognize structurally con ...
.


Inflammasomes and pyroptosis

By 2002, Dixit was among the first scientists to demonstrate that pro-inflammatory caspases are part of a molecular complex named inflammasomes that are integral to the proper functioning of the innate immune system. In particular, he defined regulatory components upstream of
caspase-1 Caspase-1/Interleukin-1 converting enzyme (ICE) is an evolutionarily conserved enzyme that proteolytically cleaves other proteins, such as the precursors of the inflammatory cytokines interleukin 1β and interleukin 18 as well as the pyroptosis ...
that proteolytically activate the pro-inflammatory cytokines interleukin-1beta and interleukin-18. In 2004 and 2006, Dixit provided unequivocal genetic evidence by identifying the
NOD-like receptor The nucleotide-binding oligomerization domain-like receptors, or NOD-like receptors (NLRs) (also known as nucleotide-binding leucine-rich repeat receptors), are intracellular sensors of pathogen-associated molecular patterns (PAMPs) that enter th ...
s NLRP3 and NLRC4 as proximal components of inflammasomes responsible for caspase-1 activation. The research showed that inflammasomes distinguish between inflammatory triggers, such as differentiating between types of bacteria, through the use of different sensors.  More specifically, the intracellular protein NLRC4 was identified as a sensor for ''
Salmonella ''Salmonella'' is a genus of bacillus (shape), rod-shaped, (bacillus) Gram-negative bacteria of the family Enterobacteriaceae. The two known species of ''Salmonella'' are ''Salmonella enterica'' and ''Salmonella bongori''. ''S. enterica'' ...
'' that triggered assembly of an inflammasome complex. NLRP3 and the inflammasome adaptor ASC, on the other hand, were found to be required for activation of the inflammasome by diverse pathogenic agents, including microbial toxins, and Gram-positive bacteria such as ''Staphylococcus aureus'' or ''Listeria monocytogenes''. In 2009, his group followed up on these findings with the discovery of the first small molecule inhibitors of the
NLRP3 inflammasome Inflammasomes are cytosolic multiprotein complexes of the innate immune system responsible for the activation of inflammatory responses and cell death. They are formed as a result of specific cytosolic pattern recognition receptors (PRRs) sensing ...
. Derived analogs of this
sulfonylurea Sulfonylureas or sulphonylureas are a class of organic compounds used in medicine and agriculture. The functional group consists of a sulfonyl group (-S(=O)2) with its sulphur atom bonded to a nitrogen atom of a ureylene group (N,N-dehydrourea ...
class of compounds are currently in clinical development for inflammatory and neurodegenerative diseases. Dixit's team discovered the non-canonical inflammasome pathway and its critical role in mediating lethal systemic inflammation in response to Gram-negative pathogens, detailed in three papers in 2011, 2013, and 2015. This illuminated a new pathway to sepsis, a syndrome responsible for millions of deaths worldwide. Hence, targeting this pathway for therapeutic benefit is a substantial effort in pharmaceutical companies. The 2011 paper showed that mice lacking the gene that encodes caspase-1 also carry a mutation in a neighboring caspase gene, caspase-11 (
caspase-4 Caspase 4 is an enzyme that proteolytically cleaves other proteins at an aspartic acid residue (LEVD-), and belongs to a family of cysteine proteases called caspases. The function of caspase 4 is not fully known, but it is believed to be an infl ...
in humans), which is responsible for many of the effects previously attributed to caspase-1, including sensitivity to
sepsis Sepsis is a potentially life-threatening condition that arises when the body's response to infection causes injury to its own tissues and organs. This initial stage of sepsis is followed by suppression of the immune system. Common signs and s ...
. The 2013 paper clarified the role of
Toll-like receptor 4 Toll-like receptor 4 (TLR4), also designated as CD284 (cluster of differentiation 284), is a key activator of the innate immune response and plays a central role in the fight against bacterial infections. TLR4 is a transmembrane protein of approx ...
and caspase-11 in inducing innate immune responses to
Lipopolysaccharide Lipopolysaccharide (LPS), now more commonly known as endotoxin, is a collective term for components of the outermost membrane of the cell envelope of gram-negative bacteria, such as '' E. coli'' and ''Salmonella'' with a common structural archit ...
s (LPS), a cell wall component of Gram-negative bacteria. The research showed that recognition of intracellular LPS by innate immune cells leads to a form of necrotic, proinflammatory death, termed
pyroptosis Pyroptosis is a highly inflammatory form of lytic programmed cell death that occurs most frequently upon infection with intracellular pathogens and is likely to form part of the antimicrobial response. This process promotes the rapid clearance of ...
. They showed that these mechanisms did not depend on TLR4, but were rather mediated by caspase-11. This was significant, because for years it was assumed that TLR4 was solely responsible for cellular responses to LPS. In the 2015 paper, they used mice subjected to random mutation to find mediators of caspase-11-dependent non-canonical inflammasome signaling. This led to the discovery that caspase-mediated cleavage of the protein
GSDMD Gasdermin D (GSDMD, from combination of ''gastro'' and ''dermato'', referencing the locations where its family of proteins were originally found to be primarily expressed) is a protein that in humans is encoded by the ''GSDMD'' gene on chromosome ...
creates a pore forming, plasma membrane disrupting amino-terminal fragment that induces pyroptosis. The advances contributed to firmly establishing the sequence of events leading from inflammasome activation to pyroptosis, DAMP release, and lethal septic shock. Using a similar research strategy, in 2021, they reported NINJ1 to be a mediator of plasma membrane rupture and DAMP release from pyroptotic cells.


Ubiquitin signaling (A20, LUBAC, OTULIN)

In 1990, Dixit's lab at the University of Michigan discovered
tumor necrosis factor Tumor necrosis factor (TNF), formerly known as TNF-α, is a chemical messenger produced by the immune system that induces inflammation. TNF is produced primarily by activated macrophages, and induces inflammation by binding to its receptors o ...
(TNF)-inducible genes in endothelial cells, including A20/
TNFAIP3 Tumor necrosis factor, alpha-induced protein 3 or A20 is a protein that in humans is encoded by the ''TNFAIP3'' gene. This gene was identified as a gene whose expression is rapidly induced by the tumor necrosis factor (TNF). The protein encoded b ...
. In later years, A20/TNFAIP3 would also achieve prominence as a modulator of inflammation. In 2004, Dixit's group at Genentech discovered “ubiquitin editing” as a damping mechanism  that attaches
ubiquitin Ubiquitin is a small (8.6  kDa) regulatory protein found in most tissues of eukaryotic organisms, i.e., it is found ''ubiquitously''. It was discovered in 1975 by Gideon Goldstein and further characterized throughout the late 1970s and 19 ...
tags to TNF-receptor associated proteins to switch off pro-inflammatory signaling. In 2018, in a similar vein, his group showed that the ubiquitin-cleaving enzyme, OTULIN, regulates cell death and inflammation by removing inhibitory linear ubiquitin chains from LUBAC, an enzyme that activates NF-κB.


Awards and honors

Dixit is an elected member of the
National Academy of Sciences The National Academy of Sciences (NAS) is a United States nonprofit, NGO, non-governmental organization. NAS is part of the National Academies of Sciences, Engineering, and Medicine, along with the National Academy of Engineering (NAE) and the ...
, the
National Academy of Medicine The National Academy of Medicine (NAM), known as the Institute of Medicine (IoM) until 2015, is an American nonprofit, non-governmental organization. The National Academy of Medicine is a part of the National Academies of Sciences, Engineerin ...
and the
American Academy of Arts and Sciences The American Academy of Arts and Sciences (The Academy) is one of the oldest learned societies in the United States. It was founded in 1780 during the American Revolution by John Adams, John Hancock, James Bowdoin, Andrew Oliver, and other ...
. In 2016, Dixit received the Gutenberg Research Award in Mainz, Germany. He also received the G.H.A. Clowes Memorial Award from the
American Association for Cancer Research The American Association for Cancer Research (AACR) is the world's oldest and largest professional association related to cancer research. Based in Philadelphia, the AACR focuses on all aspects of cancer research, including Basic research, basic, ...
and the Dawson Prize in Genetics from
Trinity College Dublin Trinity College Dublin (), officially titled The College of the Holy and Undivided Trinity of Queen Elizabeth near Dublin, and legally incorporated as Trinity College, the University of Dublin (TCD), is the sole constituent college of the Unive ...
. In 2017, he was elected Fellow of the
American Association for Cancer Research The American Association for Cancer Research (AACR) is the world's oldest and largest professional association related to cancer research. Based in Philadelphia, the AACR focuses on all aspects of cancer research, including Basic research, basic, ...
. That same year, he participated in the Harvey Lecture Series, held by the
Harvey Society The Harvey Society or Harvey Society of New York is a learned society based in New York City, Named after the British scientist William Harvey (1578–1657), its scope is "the diffusion of knowledge of the medical sciences". Since 1905, the soci ...
at The
Rockefeller University The Rockefeller University is a Private university, private Medical research, biomedical Research university, research and graduate-only university in New York City, New York. It focuses primarily on the biological and medical sciences and pro ...
in New York City. In 2018, Dixit received the Cell Death & Differentiation (CDD) Jurg Tschopp Prize at
Clare College Clare College is a constituent college of the University of Cambridge in Cambridge, England. The college was founded in 1326 as University Hall, making it the second-oldest surviving college of the University after Peterhouse. It was refounded ...
in Cambridge, United Kingdom. He has served on the boards of the
Bill & Melinda Gates Foundation The Gates Foundation is an American private foundation founded by Bill Gates and Melinda French Gates. Based in Seattle, Washington, it was launched in 2000 and is reported to be the third largest charitable foundation in the world, holding $ ...
,
Howard Hughes Medical Institute The Howard Hughes Medical Institute (HHMI) is an American non-profit medical research organization headquartered in Chevy Chase, Maryland with additional facilities in Ashburn, Virginia. It was founded in 1953 by Howard Hughes, an American busin ...
, and the Keystone Symposia on Molecular and Cellular Biology. In 2021, he was elected Foreign Member of the Royal Society (ForMemRs). In 2022, Dixit received the Vilcek Prize in Biomedical Science, which honors outstanding immigrant scientists for their research leadership in the United States and is awarded by the
Vilcek Foundation The Vilcek Foundation is an American Nonprofit organization, nonprofit organization. The foundation's programs include the Vilcek Foundation Prizes. The Foundation was established in 2000 by Ján Vilček, Jan and Marica Vilcek, Immigrants to the ...
, the Dr. A.H. Heineken Prize for Medicine for his fundamental contributions to the fields of cell death and inflammation, and the Bijvoet Medal of the
Bijvoet Centre for Biomolecular Research The Bijvoet Centre for Biomolecular Research is a research institute at Utrecht University. The Bijvoet Centre performs research on the relation between the structure and function of biomolecules, including proteins and lipids, which play a role ...
of
Utrecht University Utrecht University (UU; , formerly ''Rijksuniversiteit Utrecht'') is a public university, public research university in Utrecht, Netherlands. Established , it is one of the oldest universities in the Netherlands. In 2023, it had an enrollment of ...
. He also received the William B. Coley Award for Distinguished Research in Basic and Tumor Immunology in 2022.


References

{{DEFAULTSORT:Dixit, Vishva Members of the United States National Academy of Sciences Kenyan biologists Living people University of Michigan faculty 1950s births Members of the National Academy of Medicine Bijvoet Medal recipients Washington University in St. Louis fellows Genentech people