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''Thomasomys ucucha'', also known as the ucucha thomasomys, is a
rodent Rodents (from Latin , 'to gnaw') are mammals of the order Rodentia (), which are characterized by a single pair of continuously growing incisors in each of the upper and lower jaws. About 40% of all mammal species are rodents. They are n ...
in the genus ''
Thomasomys ''Thomasomys'' is a genus of rodent in the family Cricetidae, named after British zoologist Oldfield Thomas. Nuclear DNA sequence analysis has indicated that it is a sister taxon to ''Rhagomys''. It contains the following species: * Anderson's ...
'' of the family
Cricetidae The Cricetidae are a family of rodents in the large and complex superfamily Muroidea. It includes true hamsters, voles, lemmings, muskrats, and New World rats and mice. At almost 608 species, it is the second-largest family of mammals, and h ...
. It is known only from high altitude forest and grassland habitats in the Cordillera Oriental of
Ecuador Ecuador ( ; ; Quechua: ''Ikwayur''; Shuar: ''Ecuador'' or ''Ekuatur''), officially the Republic of Ecuador ( es, República del Ecuador, which literally translates as "Republic of the Equator"; Quechua: ''Ikwadur Ripuwlika''; Shuar: ' ...
. Seven other species of ''Thomasomys'' live in the same areas. First collected in 1903, ''T. ucucha'' was formally described as a new species in 2003 and most closely resembles '' T. hylophilus'', which occurs further to the north. The species is listed as " vulnerable" in the
IUCN Red List The International Union for Conservation of Nature (IUCN) Red List of Threatened Species, also known as the IUCN Red List or Red Data Book, founded in 1964, is the world's most comprehensive inventory of the global conservation status of biolo ...
as a result of
habitat destruction Habitat destruction (also termed habitat loss and habitat reduction) is the process by which a natural habitat becomes incapable of supporting its native species. The organisms that previously inhabited the site are displaced or dead, thereby ...
. Medium-sized, dark-furred, and long-tailed, ''T. ucucha'' can be distinguished from all other species of ''Thomasomys'' by its large, broad,
procumbent This page provides a glossary of plant morphology. Botanists and other biologists who study plant morphology use a number of different terms to classify and identify plant organs and parts that can be observed using no more than a handheld magnify ...
upper
incisor Incisors (from Latin ''incidere'', "to cut") are the front teeth present in most mammals. They are located in the premaxilla above and on the mandible below. Humans have a total of eight (two on each side, top and bottom). Opossums have 18, wher ...
s. Head and body length is and body mass is . The tail is scarcely furred. The front part of the skull is flat, short, and broad. The incisive foramina, openings at the front of the
palate The palate () is the roof of the mouth in humans and other mammals. It separates the oral cavity from the nasal cavity. A similar structure is found in crocodilians, but in most other tetrapods, the oral and nasal cavities are not truly separ ...
, are short, and the palate itself is broad and smooth. The root of the lower incisor is contained in a prominent capsular process.


Taxonomy

The first three specimens of ''Thomasomys ucucha'' were collected in 1903 at Tablón in
Pichincha Province Pichincha () is a province of Ecuador located in the northern Sierra region; its capital and largest city is Quito. It is bordered by Imbabura and Esmeraldas to the north, Cotopaxi and Santo Domingo de los Tsáchilas to the south, Napo and ...
, Ecuador, by L. Söderström. It was not found again until Robert S. Voss of the
American Museum of Natural History The American Museum of Natural History (abbreviated as AMNH) is a natural history museum on the Upper West Side of Manhattan in New York City. In Theodore Roosevelt Park, across the street from Central Park, the museum complex comprises 26 int ...
collected a total of forty-three specimens at nearby
Papallacta Papallacta is a small village at an altitude of in Napo Province, Ecuador. The village is located off the Eastern Cordilleras, on the road from Quito into the Amazon rainforest. It is known for its hot springs. How to reach The drive fro ...
,
Napo Province Napo () is a province in Ecuador. Its capital is Tena. The province contains the Napo River. The province is low developed without much industrial presence. The thick rainforest is home to many natives that remain isolated by preference, descenda ...
, in 1978 and 1980 (the type locality is described as the valley of the Rio Papallacta). Papallacta is in a remote area that is difficult to access, and the mammal fauna of the region remains poorly known. In 2003, he formally described the animal as a new species, ''Thomasomys ucucha'',Voss, 2003, p. 10 in a publication in '' American Museum Novitates'' in which he also reviewed the mammal fauna of Papallacta.Voss, 2003, p. 2 The generic name, ''
Thomasomys ''Thomasomys'' is a genus of rodent in the family Cricetidae, named after British zoologist Oldfield Thomas. Nuclear DNA sequence analysis has indicated that it is a sister taxon to ''Rhagomys''. It contains the following species: * Anderson's ...
'', honors English zoologist
Oldfield Thomas Michael Rogers Oldfield Thomas (21 February 1858 – 16 June 1929) was a British zoologist. Career Thomas worked at the Natural History Museum on mammals, describing about 2,000 new species and subspecies for the first time. He was appo ...
, who named about 2,900
taxa In biology, a taxon (back-formation from ''taxonomy''; plural taxa) is a group of one or more populations of an organism or organisms seen by taxonomists to form a unit. Although neither is required, a taxon is usually known by a particular nam ...
of mammals, and the specific name, ''ucucha'', is the local Quechua word for "mouse". ''T. ucucha'' most closely resembles '' T. hylophilus'', which is found further north in Colombia and Venezuela.Voss, 2003, p. 12 A comparison of
mitochondrial DNA Mitochondrial DNA (mtDNA or mDNA) is the DNA located in mitochondria, cellular organelles within eukaryotic cells that convert chemical energy from food into a form that cells can use, such as adenosine triphosphate (ATP). Mitochondrial D ...
found that ''T. ucucha'' was closest to specimens identified as '' T. caudivarius'' and '' T. silvestris'', but ''T. hylophilus'' was not included in this study.Lee et al., 2015, fig. 2 All are members of ''Thomasomys'', a diverse genus that occurs in the northern Andes, from Bolivia to Venezuela.Voss, 2003, p. 8 Together with ''
Rhipidomys ''Rhipidomys'' is a genus of rodents in the family Cricetidae, The following 24 species of climbing mouse species are currently recognised: * '' Rhipidomys albujai'' * Southern climbing mouse (''Rhipidomys austrinus'') * Cariri climbing mouse ...
'' and a few other, smaller genera, ''Thomasomys'' forms the tribe Thomasomyini, which includes over fifty species found in South America and Panama. Thomasomyini in turn is part of the subfamily
Sigmodontinae The rodent subfamily Sigmodontinae includes New World rats and mice, with at least 376 species. Many authorities include the Neotominae and Tylomyinae as part of a larger definition of Sigmodontinae. When those genera are included, the species c ...
of the family
Cricetidae The Cricetidae are a family of rodents in the large and complex superfamily Muroidea. It includes true hamsters, voles, lemmings, muskrats, and New World rats and mice. At almost 608 species, it is the second-largest family of mammals, and h ...
, along with hundreds of other species of mainly small rodents.


Description

''Thomasomys ucucha'' is a medium-sized ''Thomasomys'' with a relatively long tail. The dense, fine, and soft fur is dark brown on the upperparts, changing gradually into the grey underparts. The mystacial vibrissae (whiskers above the mouth) are long and extend beyond the ears when laid back against the head. Sparse short, dark hairs are present on the ears. The digits and metapodials (bones of the centers of the hand and feet) of the hands and feet are covered with dark hairs, but the
ungual tufts In mammals, ungual tufts are tufts of hairs at the base of claws of the forefeet and hindfeet. Their presence has been used as a character in cladistic studies of the Cricetidae, a large family of rodents.Weksler, 2006, p. 19 Rice rats Memb ...
at the bases of the claws consist of longer, gray hairs. The fifth digit of the foot is long, with the tip of its claw almost reaching the base of the claw of the fourth digit. The tail is dark and hardly furred, except for a pencil of long hairs at the end; some animals have a white tail tip. Females have six mammae.Voss, 2003, p. 11 In thirty-six specimens, head and body length is , averaging ; tail length is , averaging ; hindfoot length is , averaging ; ear length is , averaging ; and weight is , averaging . The front (rostral) part of the
skull The skull is a bone protective cavity for the brain. The skull is composed of four types of bone i.e., cranial bones, facial bones, ear ossicles and hyoid bone. However two parts are more prominent: the cranium and the mandible. In humans, th ...
is short—shorter and broader than in ''T. hylophilus''Voss, 2003, p. 13—and flat and the notches in the zygomatic plates at the sides are poorly developed. The plates themselves are broad. The
zygomatic arch In anatomy, the zygomatic arch, or cheek bone, is a part of the skull formed by the zygomatic process of the temporal bone (a bone extending forward from the side of the skull, over the opening of the ear) and the temporal process of the zygo ...
es (cheekbones) spread broadly and are rounded in shape. The narrow interorbital region (between the eyes) is hourglass-shaped. The
braincase In human anatomy, the neurocranium, also known as the braincase, brainpan, or brain-pan is the upper and back part of the skull, which forms a protective case around the brain. In the human skull, the neurocranium includes the calvaria or skul ...
is robust. The incisive foramina, which perforate the
palate The palate () is the roof of the mouth in humans and other mammals. It separates the oral cavity from the nasal cavity. A similar structure is found in crocodilians, but in most other tetrapods, the oral and nasal cavities are not truly separ ...
between the
incisor Incisors (from Latin ''incidere'', "to cut") are the front teeth present in most mammals. They are located in the premaxilla above and on the mandible below. Humans have a total of eight (two on each side, top and bottom). Opossums have 18, wher ...
s and the molars, are short and do not reach near the first molars; they are longer in ''T. hylophilus''. They are widest where the
premaxilla The premaxilla (or praemaxilla) is one of a pair of small cranial bones at the very tip of the upper jaw of many animals, usually, but not always, bearing teeth. In humans, they are fused with the maxilla. The "premaxilla" of therian mammal has ...
ry and
maxilla The maxilla (plural: ''maxillae'' ) in vertebrates is the upper fixed (not fixed in Neopterygii) bone of the jaw formed from the fusion of two maxillary bones. In humans, the upper jaw includes the hard palate in the front of the mouth. T ...
ry bones meet. The palate itself is also short, not extending beyond the third molars, and is broad and lacks ridges or grooves. There are simple
posterolateral palatal pits In anatomy, posterolateral palatal pits are gaps at the sides of the back of the bony palate, near the last molars.Weksler, 2006, p. 34 Posterolateral palatal pits are present, in various degrees of development, in several members of the rod ...
at the back of the palate, near the third molars. The mesopterygoid fossa, an opening located behind the end of the palate, is broad and its roof is either fully ossified or perforated by small sphenopalatine vacuities where the presphenoid and basisphenoid bones meet. An alisphenoid strut separates two foramina (openings) at the base of the skull, the buccinator-masticatory foramen and the foramen ovale accessorium. The pattern of grooves and foramina on the head indicates that the circulation of the arteries in the head of ''T. ucucha'' follows the primitive pattern. The tegmen tympani, the roof of the
tympanic cavity The tympanic cavity is a small cavity surrounding the bones of the middle ear. Within it sit the ossicles, three small bones that transmit vibrations used in the detection of sound. Structure On its lateral surface, it abuts the external auditor ...
, overlaps the suspensory process of the squamosal bone. At the back of the
mandible In anatomy, the mandible, lower jaw or jawbone is the largest, strongest and lowest bone in the human facial skeleton. It forms the lower jaw and holds the lower teeth in place. The mandible sits beneath the maxilla. It is the only movable bone ...
(lower jaw), there is a capsular process to receive the root of the lower
incisor Incisors (from Latin ''incidere'', "to cut") are the front teeth present in most mammals. They are located in the premaxilla above and on the mandible below. Humans have a total of eight (two on each side, top and bottom). Opossums have 18, wher ...
, which is absent in ''T. hylophilus''. The large upper incisors are orthodont, with their cutting edge at about a right angle to the upper molars, and heavily pigmented with orange. Those of ''T. hylophilus'' are narrower, less procumbent, and less pigmented. The orthodont upper incisors suffice to distinguish ''T. ucucha'' from all other members of the genus but '' T. australis'' and '' T. daphne'', which have much shorter and narrower incisors. The left and right molar rows are parallel. The molars are more hypsodont (high-crowned) than in other ''Thomasomys''. The
anterocone Many different terms have been proposed for features of the tooth crown in mammals. The structures within the molars receive different names according to their position and morphology. This nomenclature was developed by Henry Fairfield Osborn i ...
, the cusp at the front of the first upper molar, is divided into distinct cuspules at the lingual (inner) and labial (outer) sides by an anteromedian flexus. The accessory ridges on the upper molars, the anterolophs and
mesoloph Many different terms have been proposed for features of the tooth crown in mammals. The structures within the molars receive different names according to their position and morphology. This nomenclature was developed by Henry Fairfield Osborn ...
s, are less well-developed than in ''T. hylophilus''. The third upper molar is reduced relative to the second, much more so than in ''T. hylophilus''. The lower molars are generally similar to the uppers, but the anteroconid (the equivalent of the anterocone on the first lower molar) is often undivided and the third molar is unreduced. The
glans penis In male human anatomy, the glans penis, commonly referred to as the glans, is the bulbous structure at the distal end of the human penis that is the human male's most sensitive erogenous zone and their primary anatomical source of sexual pl ...
is rounded, short, and small and is superficially divided into left and right halves by a trough at the top and a ridge at the bottom. Most of the glans is covered with penile spines, except for an area near the tip.


Distribution and ecology

''Thomasomys ucucha'' occurs only in the Cordillera Oriental of Ecuador in the provinces of Pichincha, Napo, and Carchi.Lee et al., 2015, p. 7 At Papallacta, ''Thomasomys ucucha'' was collected in a variety of habitats at altitude, including ''
páramo Páramo () can refer to a variety of alpine tundra ecosystems located in the Andes Mountain Range, South America. Some ecologists describe the páramo broadly as "all high, tropical, montane vegetation above the continuous timberline". A narrowe ...
'' (high-mountain grassland with shrubs and forest patches) and subalpine rainforest.Voss, 2003, p. 14 Most were taken in runways (paths through vegetation made by animals) and a few alongside small streams or on a low tree. At Guandera Biological Reserve in Carchi, the species has been found at a slightly lower elevation, . Other
muroid The Muroidea are a large superfamily of rodents, including mice, rats, voles, hamsters, lemmings, gerbils, and many other relatives. Although the Muroidea originated in Eurasia, they occupy a vast variety of habitats on every continent excep ...
rodents found at the same places as ''T. ucucha'' include two akodontines (grass mice), '' Akodon latebricola'' and '' Akodon mollis''; two ichthyomyines (water rats), '' Anotomys leander'' and '' Neusticomys monticolus''; two oryzomyines (rice rats), '' Microryzomys altissimus'' and '' M. minutus''; the thomasomyine '' Chilomys instans''; and five other species of ''Thomasomys'', '' T. aureus'', '' T. baeops'', '' T. cinnameus'', '' T. erro'', and '' T. paramorum''.Voss, 2003, p. 15 Other species have been recorded nearby, and Voss wrote that ''T. ucucha'' may occur
sympatric In biology, two related species or populations are considered sympatric when they exist in the same geographic area and thus frequently encounter one another. An initially interbreeding population that splits into two or more distinct species s ...
ally with seven other species of ''Thomasomys''. With ''Akodon latebricola'' and ''Thomasomys erro'', ''T. ucucha'' is one of three species that are known only from the northeastern Andes of Ecuador.Voss, 2003, p. 37


Conservation status

''Thomasomys ucucha'' is locally common, but has a very limited known distribution. Its conservation status has been assessed as " vulnerable" by the
IUCN The International Union for Conservation of Nature (IUCN; officially International Union for Conservation of Nature and Natural Resources) is an international organization working in the field of nature conservation and sustainable use of natu ...
because of its highly localized distribution; it may be threatened by the destruction of its habitat for
agricultural Agriculture or farming is the practice of cultivating plants and livestock. Agriculture was the key development in the rise of sedentary human civilization, whereby farming of domesticated species created food surpluses that enabled peopl ...
purposes, but occurs near or in several
protected area Protected areas or conservation areas are locations which receive protection because of their recognized natural, ecological or cultural values. There are several kinds of protected areas, which vary by level of protection depending on the ena ...
s.Tirira, 2007, p. 198


References


Literature cited

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External sources


Pontificia Universidad Católica del Ecuador, Bioweb
data, maps and photographs {{Taxonbar, from=Q1766324 Mammals of Ecuador Thomasomys Mammals described in 2003 Páramo fauna