
Stygofauna are any
fauna
Fauna (: faunae or faunas) is all of the animal life present in a particular region or time. The corresponding terms for plants and fungi are ''flora'' and '' funga'', respectively. Flora, fauna, funga and other forms of life are collectively ...
that live in
groundwater
Groundwater is the water present beneath Earth's surface in rock and Pore space in soil, soil pore spaces and in the fractures of stratum, rock formations. About 30 percent of all readily available fresh water in the world is groundwater. A unit ...
systems or aquifers, such as
cave
Caves or caverns are natural voids under the Earth's Planetary surface, surface. Caves often form by the weathering of rock and often extend deep underground. Exogene caves are smaller openings that extend a relatively short distance undergrou ...
s, fissures and
vugs. Stygofauna and
troglofauna
Troglofauna are small cave-dwelling animals that have adapted to their dark surroundings. Troglofauna and stygofauna are the two types of subterranean fauna (based on life-history). Both are associated with subterranean environments – troglofa ...
are the two types of
subterranean fauna
file:P anguinus1.jpg, The olm (''Proteus anguinus''), a typical cave dwelling chordate, Endemism, endemic of Dinaric Alps
Subterranean fauna refers to Animal, animal species that are adaptation, adapted to live in an underground Natural environmen ...
(based on life-history). Both are associated with subterranean environments – stygofauna are associated with water, and troglofauna with caves and spaces above the
water table
The water table is the upper surface of the phreatic zone or zone of saturation. The zone of saturation is where the pores and fractures of the ground are saturated with groundwater, which may be fresh, saline, or brackish, depending on the loc ...
. Stygofauna can live within freshwater
aquifer
An aquifer is an underground layer of water-bearing material, consisting of permeability (Earth sciences), permeable or fractured rock, or of unconsolidated materials (gravel, sand, or silt). Aquifers vary greatly in their characteristics. The s ...
s and within the
pore
Pore may refer to:
Biology Animal biology and microbiology
* Sweat pore, an anatomical structure of the skin of humans (and other mammals) used for secretion of sweat
* Hair follicle, an anatomical structure of the skin of humans (and other ...
spaces of
limestone
Limestone is a type of carbonate rock, carbonate sedimentary rock which is the main source of the material Lime (material), lime. It is composed mostly of the minerals calcite and aragonite, which are different Polymorphism (materials science) ...
,
calcrete or
laterite
Laterite is a soil type rich in iron and aluminium and is commonly considered to have formed in hot and wet tropical areas. Nearly all laterites are of rusty-red coloration, because of high iron oxide content. They develop by intensive and prolo ...
, whilst larger animals can be found in cave waters and wells. Stygofaunal animals, like troglofauna, are divided into three groups based on their life history - stygophiles, stygoxenes, and stygobites.
# Stygophiles inhabit both surface and subterranean aquatic environments, but are not necessarily restricted to either.
# Stygoxenes are like stygophiles, except they are defined as accidental or occasional presence in subterranean waters. Stygophiles and stygoxenes may live for part of their lives in caves, but don't complete their life cycle in them.
# Stygobites are obligate, or strictly subterranean, aquatic animals and complete their entire life in this environment.
Extensive research of stygofauna has been undertaken in countries with ready access to caves and wells such as
France
France, officially the French Republic, is a country located primarily in Western Europe. Overseas France, Its overseas regions and territories include French Guiana in South America, Saint Pierre and Miquelon in the Atlantic Ocean#North Atlan ...
,
Slovenia
Slovenia, officially the Republic of Slovenia, is a country in Central Europe. It borders Italy to the west, Austria to the north, Hungary to the northeast, Croatia to the south and southeast, and a short (46.6 km) coastline within the Adriati ...
, the
US and, more recently,
Australia
Australia, officially the Commonwealth of Australia, is a country comprising mainland Australia, the mainland of the Australia (continent), Australian continent, the island of Tasmania and list of islands of Australia, numerous smaller isl ...
. Many species of stygofauna, particularly obligate stygobites, are
endemic
Endemism is the state of a species being found only in a single defined geographic location, such as an island, state, nation, country or other defined zone; organisms that are indigenous to a place are not endemic to it if they are also foun ...
to specific regions or even individual caves. This makes them an important focus for the conservation of groundwater systems.
Diet and lifecycle

Stygofauna have adapted to the limited food supply and are extremely energy efficient. Stygofauna feed on plankton, bacteria, and plants found in streams.
To survive in an environment where food is scarce and oxygen levels are low, stygofauna often have very low
metabolism
Metabolism (, from ''metabolē'', "change") is the set of life-sustaining chemical reactions in organisms. The three main functions of metabolism are: the conversion of the energy in food to energy available to run cellular processes; the co ...
. As a result, stygofauna may live longer than other terrestrial species. For example, the
crayfish
Crayfish are freshwater crustaceans belonging to the infraorder Astacidea, which also contains lobsters. Taxonomically, they are members of the superfamilies Astacoidea and Parastacoidea. They breathe through feather-like gills. Some spe ...
''
Orconectes australis'' from
Shelta Cave in Alabama has been estimated to reproduce at 100 years and live to 175
although more recent research suggests their lifespan is closer to 22 years.
Distribution and species
Stygofauna are found all over the world and include
turbellarian
The Turbellaria are one of the traditional sub-divisions of the phylum Platyhelminthes (flatworms), and include all the sub-groups that are not exclusively parasitic. There are about 4,500 species, which range from to large freshwater forms mor ...
s,
gastropod
Gastropods (), commonly known as slugs and snails, belong to a large Taxonomy (biology), taxonomic class of invertebrates within the phylum Mollusca called Gastropoda ().
This class comprises snails and slugs from saltwater, freshwater, and fro ...
s,
isopods
Isopoda is an Order (biology), order of crustaceans. Members of this group are called isopods and include both Aquatic animal, aquatic species and Terrestrial animal, terrestrial species such as woodlice. All have rigid, segmented exoskeletons ...
,
amphipods,
decapods
The Decapoda or decapods, from Ancient Greek δεκάς (''dekás''), meaning "ten", and πούς (''poús''), meaning "foot", is a large order (biology), order of crustaceans within the class Malacostraca, and includes crabs, lobsters, crayfis ...
,
fish
A fish (: fish or fishes) is an aquatic animal, aquatic, Anamniotes, anamniotic, gill-bearing vertebrate animal with swimming fish fin, fins and craniate, a hard skull, but lacking limb (anatomy), limbs with digit (anatomy), digits. Fish can ...
es, or
salamander
Salamanders are a group of amphibians typically characterized by their lizard-like appearance, with slender bodies, blunt snouts, short limbs projecting at right angles to the body, and the presence of a tail in both larvae and adults. All t ...
s.
Stygofaunal gastropods are found in the U.S., Europe, Japan,
and Australia. Stygobite turbellarians can be found in North America, Europe and Japan.
Stygobite isopods, amphipods and decapods are found widely around the world.
Cave salamander
A cave salamander is a type of salamander that primarily or exclusively inhabits caves, a group that includes several species. Some of these animals have developed special, even extreme, adaptations to their subterranean environments. Some specie ...
s are found in Europe and the U.S., but only some of these (such as the
olm
The olm () or proteus (''Proteus anguinus'') is an aquatic salamander which is the only species in the genus ''Proteus'' of the family Proteidae and the only exclusively cave-dwelling chordate species found in Europe; the family's other extant g ...
and
Texas blind salamander
The Texas blind salamander (''Eurycea rathbuni'') is a rare and endangered cave-dwelling troglobite amphibian native to San Marcos, Hays County, Texas, specifically the San Marcos Pool of the Edwards Aquifer. This species resembles the olm, a ...
) are entirely aquatic.
The approximately 170 species of stygobite fish, popularly known as
cavefish
Cavefish or cave fish is a generic term for fresh and brackish water fish adapted to life in caves and other underground habitats. Related terms are subterranean fish, Troglomorphism, troglomorphic fish, troglobitic fish, stygobitic fish, phreat ...
, are found in all continents, except Antarctica, but with major geographical differences in the
species richness
Species richness is the number of different species represented in an community (ecology), ecological community, landscape or region. Species richness is simply a count of species, and it does not take into account the Abundance (ecology), abunda ...
.
Collecting stygofauna
Several methods are currently used to sample stygofauna. The accepted method is to lower a haul net, which is a weighted
plankton net (with minimum 50 μm mesh size), to the bottom of the bore, well or sinkhole and jiggled to agitate sediments at the base of the bore. The net is then slowly retrieved, filtering stygofauna out of the water column on the upward haul.
A more destructive method is to pump bore water (using a Bou-Rouch pump) through a net on the surface (referred to as the Karaman-Chappuis method).
These two methods provide animals for morphological and molecular analyses. A video camera can also be used down the hole, providing information on life-history of the organisms but, given the small size of the animals no species determinations can be made.
See also
*
*
*
*
*
References
External links
Italian groundwater Amphipods
Origin and Age of the Marine Stygofauna of Lanzarote, Canary Islands
* {{Cite news , url=https://news.mongabay.com/2024/03/rising-temperatures-threaten-the-tiny-animals-responsible-for-groundwater-quality/ , title=Rising temperatures threaten the tiny animals responsible for groundwater quality , author=Bernardo Araujo , work=Mongabay , date=18 March 2024
Freshwater animals
Cave animals
Ecology
Hydrology