Spidroin
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Spidroins are the main
protein Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residue (biochemistry), residues. Proteins perform a vast array of functions within organisms, including Enzyme catalysis, catalysing metab ...
s in
spider silk Spider silk is a protein fibre or silk spun by spiders. Spiders use silk to make webs or other structures that function as adhesive traps to catch prey, to entangle and restrain prey before biting, to transmit tactile information, or as nest ...
. Different types of spider silk contain different spidroins, all of which are members of a single
protein family A protein family is a group of evolutionarily related proteins. In many cases, a protein family has a corresponding gene family, in which each gene encodes a corresponding protein with a 1:1 relationship. The term "protein family" should not be ...
. The most-researched type of spidroins are the major ampullate silk proteins (MaSp) used in the construction of dragline silk, the strongest type of spider silk. Dragline silk fiber was originally thought to be made up of two types of spidroins, spidroin-1 (MaSp1) and spidroin-2 (MaSp2) however recent transcriptomic analysis of over 1000 spider species has revealed multiple spidroins are expressed making it much more complex. Spidroin is part of a large group of proteins called
scleroprotein In molecular biology, fibrous proteins or scleroproteins are one of the three main classifications of protein structure (alongside globular and membrane proteins). Fibrous proteins are made up of elongated or fibrous polypeptide chains which ...
s. This group includes other insoluble structural proteins such as
collagen Collagen () is the main structural protein in the extracellular matrix of the connective tissues of many animals. It is the most abundant protein in mammals, making up 25% to 35% of protein content. Amino acids are bound together to form a trip ...
and
keratin Keratin () is one of a family of structural fibrous proteins also known as ''scleroproteins''. It is the key structural material making up Scale (anatomy), scales, hair, Nail (anatomy), nails, feathers, horn (anatomy), horns, claws, Hoof, hoove ...
. A fiber of dragline spidroin is as thick and resistant as one of steel but is more flexible. It can be stretched to approximately 135% of its original length without breaking. Its properties make it an excellent candidate for use in various scientific fields.


Structure

Major ampullate spidroins are large proteins with an extension of 250-350
kDa The dalton or unified atomic mass unit (symbols: Da or u, respectively) is a unit of mass defined as of the mass of an unbound neutral atom of carbon-12 in its nuclear and electronic ground state and at rest. It is a non-SI unit accepted f ...
, with an average of 3500
amino acids Amino acids are organic compounds that contain both amino and carboxylic acid functional groups. Although over 500 amino acids exist in nature, by far the most important are the Proteinogenic amino acid, 22 α-amino acids incorporated into p ...
. They represent a polymeric organization, mostly based on highly homogenized
tandem repeats In genetics, tandem repeats occur in DNA when a pattern of one or more nucleotides is repeated and the repetitions are directly adjacent to each other, e.g. ATTCG ATTCG ATTCG, in which the sequence ATTCG is repeated three times. Several protein ...
. There are 100tandem copies of 30to 40amino acids which repeat sequence and they represent more than 90% of the protein sequence.
Alanine Alanine (symbol Ala or A), or α-alanine, is an α-amino acid that is used in the biosynthesis of proteins. It contains an amine group and a carboxylic acid group, both attached to the central carbon atom which also carries a methyl group sid ...
and
glycine Glycine (symbol Gly or G; ) is an amino acid that has a single hydrogen atom as its side chain. It is the simplest stable amino acid. Glycine is one of the proteinogenic amino acids. It is encoded by all the codons starting with GG (G ...
residues are the most abundant amino acids in these proteins. Alanine appears in blocks of six to fourteen units that form
β-sheets The beta sheet (β-sheet, also β-pleated sheet) is a common motif of the regular protein secondary structure. Beta sheets consist of beta strands (β-strands) connected laterally by at least two or three backbone hydrogen bonds, forming a gener ...
. These alanine blocks can stack to create crystalline structures in the fiber, linking different protein molecules together. Glycine is present in different motifs, such as GGX and GPGXX (where X = A, L, Q, or Y), that also have specific secondary structures ( 310-helix and β-spiral, respectively). Glycine-rich regions are more amorphous and contribute to extensibility and flexibility. Some of the differences observed between spidroin1 and spidroin2 (the most important major ampullate spidroins) are the
proline Proline (symbol Pro or P) is an organic acid classed as a proteinogenic amino acid (used in the biosynthesis of proteins), although it does not contain the amino group but is rather a secondary amine. The secondary amine nitrogen is in the p ...
content, which is very low in the first one but significant in the second one, and the motifs. Motif is characteristic in spidroin1, while GPG and QQ are typical in spidroin2. On the other hand, spidroins have non-repetitive amino (N) and
carboxyl In organic chemistry, a carboxylic acid is an organic acid that contains a carboxyl group () attached to an R-group. The general formula of a carboxylic acid is often written as or , sometimes as with R referring to an organyl group (e.g. ...
(C) terminal domains of approximately 150and 100amino acids respectively. N- and C-terminal domains share little resemblance, except that they are both rich in
serine Serine (symbol Ser or S) is an α-amino acid that is used in the biosynthesis of proteins. It contains an α- amino group (which is in the protonated − form under biological conditions), a carboxyl group (which is in the deprotonated − ...
and both are largely
amphipathic In chemistry, an amphiphile (), or amphipath, is a chemical compound possessing both hydrophilic (''water-loving'', polar) and lipophilic (''fat-loving'', nonpolar) properties. Such a compound is called amphiphilic or amphipathic. Amphiphilic c ...
α-helical secondary structures. These domains are conserved not only between spidroin1 and 2, but also among many silk types and spider species. Experimental data show the N- and C-terminal domains contribute to fiber assembly. The
C-terminal domain The C-terminus (also known as the carboxyl-terminus, carboxy-terminus, C-terminal tail, carboxy tail, C-terminal end, or COOH-terminus) is the end of an amino acid chain (protein or polypeptide), terminated by a free carboxyl group (-COOH). When t ...
is involved in the organized transition from a soluble spidroin solution to an insoluble fiber during spinning. In the
N-terminal domain The N-terminus (also known as the amino-terminus, NH2-terminus, N-terminal end or amine-terminus) is the start of a protein or polypeptide, referring to the free amine group (-NH2) located at the end of a polypeptide. Within a peptide, the amin ...
, there are signal
peptides Peptides are short chains of amino acids linked by peptide bonds. A polypeptide is a longer, continuous, unbranched peptide chain. Polypeptides that have a molecular mass of 10,000 Dalton (unit), Da or more are called proteins. Chains of fewer t ...
which regulate spidroin secretion from silk gland cells.


Function

An individual spider spins a multitude of silk types, with each type emerging from its own distinctive set of abdominal silk
gland A gland is a Cell (biology), cell or an Organ (biology), organ in an animal's body that produces and secretes different substances that the organism needs, either into the bloodstream or into a body cavity or outer surface. A gland may also funct ...
s. This complex silk machinery enables spiders to use task-specific silks (e.g., for web assembly, egg-case construction, prey wrapping, etc.). The different types of silk (major ampullate silk, minor ampullate silk, flagelliform silk, aciniform silk, tubiliform silk, pyriform silk, and aggregate silk) are composed of different types of proteins. Dragline silk is mainly formed by spidroin proteins. It is a type of major ampullate silk and is produced in the major ampullate gland. Dragline silk is used not only to construct the outer frame and radii of the orb-shaped web but also as a hanging lifeline that allows the spider to evade and/or escape from predators. The major ampullate gland that produces this silk is formed by three main sections: a central bag (B zone) flanked by a tail (A zone) and a duct heading towards the exit. The tail secretes most of the “spinning dope”, a solution which contains the protein molecules that will constitute the silk fiber. The sac is the main storage repository. The
epithelium Epithelium or epithelial tissue is a thin, continuous, protective layer of cells with little extracellular matrix. An example is the epidermis, the outermost layer of the skin. Epithelial ( mesothelial) tissues line the outer surfaces of man ...
of the A zone is composed of tall columns of secretory cells of a single type, packed with secretory granules. The major component of these cells which secrete the fibroin solution is a 275kDa protein containing the polypeptides spidroin I and spidroin II. The output of these cells is an aqueous and highly viscous solution of about 50% protein (mostly spidroin). The product secreted makes up the dragline silk, the main structure. This highly viscous protein emulsion flows into the B zone, where it is covered by
glycoprotein Glycoproteins are proteins which contain oligosaccharide (sugar) chains covalently attached to amino acid side-chains. The carbohydrate is attached to the protein in a cotranslational or posttranslational modification. This process is known a ...
s. After exiting this bag, the liquid is funneled into the narrow duct. As the gelatinous protein solution moves into the duct, the integral spidroins and glycoproteins are gradually distorted into long, thin, aligned figures with the direction of the flow. Then, they are stretched and lined up in a way that will eventually allow them to create strong intermolecular links. After different processes the silk is extended in the spinning channel to form an extremely tough thread.


Industrial and biomedical applications

In the last decade, much research has been done about spidroin protein and spider silk in order to take advantage of some of its properties, such as its elasticity and strength. Spider silk is used in different industries, and its range of applications in biomedicine is increasing every day. For example, the military and defense industries use bulletproof vests made from these fibers. Recombinant spidroin has been successfully obtained in both eukaryotic and prokaryotic cells although there were some difficulties in the procedure due to the length of the gene sequence. Thanks to expression and the cloning work, it is possible to obtain large-scale production of spidroin which provides new opportunities for the manufacture of new biomaterials. There have been attempts to generate transgenic tobacco and potato plants that express remarkable amounts of recombinant Nephila clavipes dragline proteins. Furthermore, fibers developed from spidroin are tolerated
in vitro ''In vitro'' (meaning ''in glass'', or ''in the glass'') Research, studies are performed with Cell (biology), cells or biological molecules outside their normal biological context. Colloquially called "test-tube experiments", these studies in ...
, in
cell culture Cell culture or tissue culture is the process by which cell (biology), cells are grown under controlled conditions, generally outside of their natural environment. After cells of interest have been Cell isolation, isolated from living tissue, ...
, and in vivo, in animals like pigs, as no signs of either
inflammatory response Inflammation (from ) is part of the biological response of body tissues to harmful stimuli, such as pathogens, damaged cells, or irritants. The five cardinal signs are heat, pain, redness, swelling, and loss of function (Latin ''calor'', '' ...
nor body reaction were shown to these fibers. These results suggest that they could be used in medicine without risk of biocompatibility issues and thus potentially lead to many new opportunities in tissue engineering and regenerative medicine. The way spiders produce spidroin in micelles has inspired a method of mass-producing recombinant proteins. By fusing a pH-insensitive, charge-reversed mutant of spidroin N-terminal domain to the proteins to produce, much more soluble proteins can be produced in ''E. coli''.


Other silk types

Silk proteins present in other spider silk types are also occasionally referred to as spidroin. These include tubuliform silk protein (TuSP), flagelliform silk protein (Flag; --), minor ampullate silk proteins (MiSp; ), aciniform silk protein (AcSP), pyriform silk protein (PySp) and aggregate silk glue (ASG2/AgSp). These different silk proteins along with MaSP show some level of homology to each other, in protein domains, repeats, and in promoters, but also have their own unique features and variations on these parts to fulfill their different functions. These commonalities point at a common origin of proteins found in all these different types of silks.


Artificial production

In July 2020 a team of RIKΞN researchers report that they succeeded in using a genetically altered variant of '' R. sulfidophilum'' to produce spidroins. Text and images are available under
Creative Commons Attribution 4.0 International License


See also

*
Spider silk Spider silk is a protein fibre or silk spun by spiders. Spiders use silk to make webs or other structures that function as adhesive traps to catch prey, to entangle and restrain prey before biting, to transmit tactile information, or as nest ...
*
Fibroin Fibroin is an insoluble protein present in silk produced by numerous insects, such as the larvae of ''Bombyx mori'', and other moth genera such as ''Antheraea'', ''Cricula trifenestrata, Cricula'', ''Samia (moth), Samia'' and ''Gonometa''. Sil ...
*
Scleroprotein In molecular biology, fibrous proteins or scleroproteins are one of the three main classifications of protein structure (alongside globular and membrane proteins). Fibrous proteins are made up of elongated or fibrous polypeptide chains which ...
* BioSteel (fiber)


References


Further reading

* * * :


External links

* {{PDBe-KB2, Q05H60, Major ampullate spidroin 1 Proteins Spider anatomy