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In biology, determination is the process of matching a specimen of an organism to a known taxon, for example identifying a plant. The term is also used in
cellular biology Cell biology (also cellular biology or cytology) is a branch of biology that studies the structure, function, and behavior of cells. All living organisms are made of cells. A cell is the basic unit of life that is responsible for the living and ...
, where it means the act of the differentiation of
stem cell In multicellular organisms, stem cells are undifferentiated or partially differentiated cells that can differentiate into various types of cells and proliferate indefinitely to produce more of the same stem cell. They are the earliest type of ...
s becoming fixed. Various methods are used, for example
single Single may refer to: Arts, entertainment, and media * Single (music), a song release Songs * "Single" (Natasha Bedingfield song), 2004 * "Single" (New Kids on the Block and Ne-Yo song), 2008 * "Single" (William Wei song), 2016 * "Single", by ...
or multi-access
identification key In biology, an identification key, taxonomic key, or biological key is a printed or computer-aided device that aids the identification of biological entities, such as plants, animals, fossils, microorganisms, and pollen grains. Identification ke ...
s.


Overview

The need to identify which plant is which has existed for time immemorial. The ability depends to a large extent on what criteria and whose system is used. Determination now relies on modern taxonomy to define the identify of organisms. Taxonomy is the branch of biology which deals with identity, nomenclature and classification. The term was first coined in 1813 by Swiss botanist
Augustin Pyramus de Candolle Augustin Pyramus (or Pyrame) de Candolle (, , ; 4 February 17789 September 1841) was a Swiss botanist. René Louiche Desfontaines launched de Candolle's botanical career by recommending him at a herbarium. Within a couple of years de Candolle ...
. Carl Linnaeus, who began modern taxonomy, used the term 'systematics' himself. Determination then requires comparisons of certain characteristics and then assigning a particular specimen to a known taxonomic group, hopefully ultimately arriving at a species or
infraspecific name In botany, an infraspecific name is the scientific name for any taxon below the rank of species, i.e. an infraspecific taxon or infraspecies. (A "taxon", plural "taxa", is a group of organisms to be given a particular name.) The scientific names ...
. The characteristics used are usually morphological, such as colours, numbers, shapes and sizes of particular organs. Where possible, this is traditionally done using
dichotomous key In phylogenetics, a single-access key (also called dichotomous key, sequential key, analytical key, or pathway key) is an identification key where the sequence and structure of identification steps is fixed by the author of the key. At each point i ...
s. Keys are traditionally found in such works such as
floras Flora is all the plant life present in a particular region or time, generally the naturally occurring ( indigenous) native plants. Sometimes bacteria and fungi are also referred to as flora, as in the terms ''gut flora'' or ''skin flora''. Et ...
, field guides or monographs. Botanical or entomological keys have been coded as computer programs. Applications are even available now which use artificial intelligence to identify plants on the basis of photographs. There are not always keys available for certain regions or plant groups, and the person determining the specimen will then have to rely on characteristics in the
species description A species description is a formal description of a newly discovered species, usually in the form of a scientific paper. Its purpose is to give a clear description of a new species of organism and explain how it differs from species that have b ...
or discovered through comparison of multiple specimens with the type. Using DNA barcoding is a modern method that does not require the determiner to be highly trained. Another similar method uses the
alkaloid Alkaloids are a class of basic, naturally occurring organic compounds that contain at least one nitrogen atom. This group also includes some related compounds with neutral and even weakly acidic properties. Some synthetic compounds of similar s ...
profiles of specimens to determine the species. The total weight or length of the genome as measured in
base-pair A base pair (bp) is a fundamental unit of double-stranded nucleic acids consisting of two nucleobases bound to each other by hydrogen bonds. They form the building blocks of the DNA double helix and contribute to the folded structure of both DNA ...
s can be used to identify species.
Paleontologist Paleontology (), also spelled palaeontology or palæontology, is the scientific study of life that existed prior to, and sometimes including, the start of the Holocene epoch (roughly 11,700 years before present). It includes the study of foss ...
s must be able to identify their specimens based only on the shapes and sizes of fossilised bones. In forestry, especially in the tropics, identifying trees based on the flowers or leaves high up in the crown can be difficult, a method of identifying tree species in this case is called a 'slash', a shallow machete cut to the trunk to expose the colours of the different layers inside, and show the type of sap. The science of identifying plant species using their pollen is called palynology. Geography can also sometimes help in narrowing down the identity of a specimen. Sometimes the determiner will be unable to identify a specimen clearly, and use such additions as ''
cf. The abbreviation ''cf.'' (short for the la, confer/conferatur, both meaning "compare") is used in writing to refer the reader to other material to make a comparison with the topic being discussed. Style guides recommend that ''cf.'' be used onl ...
'' or '' aff.'' to convey this. Reference collections of identified plant specimens are collected into
herbaria A herbarium (plural: herbaria) is a collection of preserved plant specimens and associated data used for scientific study. The specimens may be whole plants or plant parts; these will usually be in dried form mounted on a sheet of paper (called ...
. Most plant parts are dried, pressed, mounted on herbarium sheets and stored; succulents and some other types of plants are normally kept in alcohol solution. The sheets are standard size of 16 × 11 inches or 41.25 × 28.75 cm. The identified plant ideally includes all parts including roots, flowers and fruits, strobili, etc. Especially the flowers are important when trying to identify a specimen.
Automated species identification Automated species identification is a method of making the expertise of taxonomists available to ecologists, parataxonomists and others via digital technology and artificial intelligence. Today, most automated identification systems rely on imag ...
uses artificial intelligence to identify species based on the images of the species. Projects like
iNaturalist iNaturalist is a social network of naturalists, citizen scientists, and biologists built on the concept of mapping and sharing observations of biodiversity across the globe. iNaturalist may be accessed via its website or from its mobile applic ...
and Pl@ntNet relies on crowdsourced data and assists identification through automatic as well as community input.


See also

*
Alpha taxonomy In biology, taxonomy () is the scientific study of naming, defining ( circumscribing) and classifying groups of biological organisms based on shared characteristics. Organisms are grouped into taxa (singular: taxon) and these groups are given ...
* Field guide *
Plant morphology Phytomorphology is the study of the morphology (biology), physical form and external structure of plants.Raven, P. H., R. F. Evert, & S. E. Eichhorn. ''Biology of Plants'', 7th ed., page 9. (New York: W. H. Freeman, 2005). . This is usually cons ...
* Pollen DNA barcoding


References

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Further reading

*Tim Jones' (2013) - "A visual identification key utilizing both gestalt and analytic approaches to identification of Carices present in North America (Plantae, Cyperaceae)" in the ''Biodiversity Data Journal'

*John Shaffner's key (1911) in the ''Ohio Naturalist'


External links


Shoot (over 19,000 plants listed)Visual Interactive Kingdom Plantae to division (Louisiana State University)Interactive Plant Identifier (University of Wisconsin)Interactive Plant Identifier (Auburn University)Image-based plant identification system (French Flora, Pl@ntNet project)Plants for identification on iNaturalistAnimals for identification on iNaturalistFungi for identification on iNaturalist
Botany