Photogeochemistry
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Photogeochemistry merges
photochemistry Photochemistry is the branch of chemistry concerned with the chemical effects of light. Generally, this term is used to describe a chemical reaction caused by absorption of ultraviolet (wavelength from 100 to 400  nm), visible light (400– ...
and
geochemistry Geochemistry is the science that uses the tools and principles of chemistry to explain the mechanisms behind major geological systems such as the Earth's crust and its oceans. The realm of geochemistry extends beyond the Earth, encompassing the ...
into the study of light-induced chemical reactions that occur or may occur among natural components of Earth's surface. The first comprehensive review on the subject was published in 2017 by the chemist and soil scientist Timothy A Doane, but the term photogeochemistry appeared a few years earlier as a keyword in studies that described the role of light-induced mineral transformations in shaping the
biogeochemistry Biogeochemistry is the scientific discipline that involves the study of the chemical, physical, geological, and biological processes and reactions that govern the composition of the natural environment (including the biosphere, the cryosphere, ...
of Earth; this indeed describes the core of photogeochemical study, although other facets may be admitted into the definition.


The domain of photogeochemistry

The context of a photogeochemical reaction is implicitly the surface of Earth, since that is where sunlight is available (although other sources of light such as chemiluminescence would not be strictly excluded from photogeochemical study). Reactions may occur among components of land such as
rocks In geology, rock (or stone) is any naturally occurring solid mass or aggregate of minerals or mineraloid matter. It is categorized by the minerals included, its chemical composition, and the way in which it is formed. Rocks form the Earth's ...
,
soil Soil, also commonly referred to as earth or dirt Dirt is an unclean matter, especially when in contact with a person's clothes, skin, or possessions. In such cases, they are said to become dirty. Common types of dirt include: * Debri ...
and detritus; components of surface water such as sediment and dissolved organic matter; and components of the atmospheric boundary layer directly influenced by contact with land or water, such as mineral aerosols and gases. Visible and medium- to long-wave
ultraviolet Ultraviolet (UV) is a form of electromagnetic radiation with wavelength from 10 nm (with a corresponding frequency around 30  PHz) to 400 nm (750  THz), shorter than that of visible light, but longer than X-rays. UV radiation ...
radiation is the main source of energy for photogeochemical reactions; wavelengths of light shorter than about 290 nm are completely absorbed by the present atmosphere, and are therefore practically irrelevant, except in consideration of atmospheres different from that of Earth today. Photogeochemical reactions are limited to chemical reactions not facilitated by living organisms. The reactions comprising
photosynthesis Photosynthesis is a process used by plants and other organisms to convert light energy into chemical energy that, through cellular respiration, can later be released to fuel the organism's activities. Some of this chemical energy is stored i ...
in plants and other organisms, for example, are not considered photogeochemistry, since the physiochemical context for these reactions is installed by the organism, and must be maintained in order for these reactions to continue (i.e. the reactions cease if the organism dies). In contrast, if a certain compound is produced by an organism, and the organism dies but the compound remains, this compound may still participate independently in a photogeochemical reaction even though its origin is biological (e.g. biogenic mineral precipitates or organic compounds released from plants into water). The study of photogeochemistry is primarily concerned with naturally occurring materials, but may extend to include other materials, inasmuch as they are representative of, or bear some relation to, those found on Earth. For example, many inorganic compounds have been synthesized in the laboratory to study
photocatalytic In chemistry, photocatalysis is the acceleration of a photoreaction in the presence of a catalyst. In catalyzed photolysis, light is absorbed by an adsorbed substrate. In photogenerated catalysis, the photocatalytic activity depends on the abi ...
reactions. Although these studies are usually not undertaken in the context of
environmental A biophysical environment is a biotic and abiotic surrounding of an organism or population, and consequently includes the factors that have an influence in their survival, development, and evolution. A biophysical environment can vary in scale f ...
or Earth sciences, the study of such reactions is relevant to photogeochemistry if there is a geochemical implication (i.e. similar reactants or reaction mechanisms occur naturally). Similarly, photogeochemistry may also include photochemical reactions of naturally occurring materials that are not touched by sunlight, if there is the possibility that these materials may become exposed (e.g. deep soil layers uncovered by mining). Except for several isolated instances, studies that fit the definition of photogeochemistry have not been explicitly specified as such, but have been traditionally categorized as photochemistry, especially at the time when photochemistry was an emerging field or new facets of photochemistry were being explored. Photogeochemical research, however, may be set apart in light of its specific context and implications, thereby bringing more exposure to this "poorly explored area of experimental geochemistry". Past studies that fit the definition of photogeochemistry may be designated retroactively as such.


Early photogeochemistry

The first efforts that can be considered photogeochemical research can be traced to the "formaldehyde hypothesis" of
Adolf von Baeyer Johann Friedrich Wilhelm Adolf von Baeyer (; 31 October 1835 – 20 August 1917) was a German chemist who synthesised indigo and developed a nomenclature for cyclic compounds (that was subsequently extended and adopted as part of the IUPAC org ...
in 1870, in which
formaldehyde Formaldehyde ( , ) (systematic name methanal) is a naturally occurring organic compound with the formula and structure . The pure compound is a pungent, colourless gas that polymerises spontaneously into paraformaldehyde (refer to section ...
was proposed to be the initial product of plant photosynthesis, formed from carbon dioxide and water through the action of light on a green leaf. This suggestion inspired numerous attempts to obtain formaldehyde ''in vitro'', which can retroactively be considered photogeochemical studies. Detection of organic compounds such as formaldehyde and sugars was reported by many workers, usually by exposure of a solution of carbon dioxide to light, typically a mercury lamp or sunlight itself. At the same time, many other workers reported negative results. One of the pioneer experiments was that of Bach in 1893, who observed the formation of lower uranium oxides upon irradiation of a solution of uranium acetate and carbon dioxide, implying the formation of formaldehyde. Some experiments included reducing agents such as hydrogen gas, and others detected formaldeyhde or other products in the absence of any additives, although the possibility was admitted that reducing power may have been produced from the decomposition of water during the experiment. In addition to the main focus on synthesis of formaldehyde and simple sugars, other light-assisted reactions were occasionally reported, such as the decomposition of formaldehyde and subsequent release of
methane Methane ( , ) is a chemical compound with the chemical formula (one carbon atom bonded to four hydrogen atoms). It is a group-14 hydride, the simplest alkane, and the main constituent of natural gas. The relative abundance of methane on Ea ...
, or the formation of
formamide Formamide is an amide derived from formic acid. It is a colorless liquid which is miscible with water and has an ammonia-like odor. It is chemical feedstock for the manufacture of sulfa drugs and other pharmaceuticals, herbicides and pesticides, a ...
from carbon monoxide and ammonia. In 1912 Benjamin Moore summarized the main facet of photogeochemistry, that of inorganic
photocatalysis In chemistry, photocatalysis is the acceleration of a photoreaction in the presence of a catalyst. In catalyzed photolysis, light is absorbed by an adsorbed substrate. In photogenerated catalysis, the photocatalytic activity depends on the abi ...
: "the inorganic colloid must possess the property of transforming sunlight, or some other form of
radiant energy Radiant may refer to: Computers, software, and video games * Radiant (software), a content management system * GtkRadiant, a level editor created by id Software for their games * Radiant AI, a technology developed by Bethesda Softworks for '' ...
, into chemical energy." Many experiments, still focused on how plants assimilate carbon, did indeed explore the effect of a "transformer" (catalyst); some effective "transformers" were similar to naturally occurring minerals, including iron(III) oxide or colloidal iron hydroxide; cobalt carbonate, copper carbonate, nickel carbonate; and iron(II) carbonate. Working with an iron oxide catalyst, Baly concluded in 1930 that "the analogy between the laboratory process and that in the living plant seems therefore to be complete," referring to his observation that in both cases, a photochemical reaction takes place on a surface, the
activation energy In chemistry and physics, activation energy is the minimum amount of energy that must be provided for compounds to result in a chemical reaction. The activation energy (''E''a) of a reaction is measured in joules per mole (J/mol), kilojoules p ...
is supplied in part by the surface and in part by light, efficiency decreases when the light intensity is too great, the optimal temperature of the reaction is similar to that of living plants, and efficiency increases from the blue to the red end of the light spectrum. At this time, however, the intricate details of plant photosynthesis were still obscure, and the nature of photocatalysis in general was still actively being discovered; Mackinney in 1932 stated that "the status of this problem hotochemical CO2 reductionis extraordinarily involved." As in many emerging fields, experiments were largely empirical, but the enthusiasm surrounding this early work did lead to significant advances in photochemistry. The simple but challenging principle of transforming solar energy into chemical energy capable of performing a desired reaction remains the basis of application-based photocatalysis, most notably
artificial photosynthesis Artificial photosynthesis is a chemical process that biomimics the natural process of photosynthesis to convert sunlight, water, and carbon dioxide into carbohydrates and oxygen. The term artificial photosynthesis is commonly used to refer to ...
(production of solar fuels). After several decades of experiments centered around the reduction of carbon dioxide, interest began to spread to other light-induced reactions involving naturally occurring materials. These experiments usually focused on reactions analogous to known biological processes, such as soil
nitrification ''Nitrification'' is the biological oxidation of ammonia to nitrite followed by the oxidation of the nitrite to nitrate occurring through separate organisms or direct ammonia oxidation to nitrate in comammox bacteria. The transformation of am ...
, for which the photochemical counterpart "photonitrification" was first reported in 1930.


Classifying photogeochemical reactions

Photogeochemical reactions may be classified based on thermodynamics and/or the nature of the materials involved. In addition, when ambiguity exists regarding an analogous reaction involving light and living organisms (
phototroph Phototrophs () are organisms that carry out photon capture to produce complex organic compounds (e.g. carbohydrates) and acquire energy. They use the energy from light to carry out various cellular metabolic processes. It is a common misconcep ...
y), the term "photochemical" may be used to distinguish a particular abiotic reaction from the corresponding photobiological reaction. For example, "photooxidation of iron(II)" can refer to either a biological process driven by light (phototrophic or photobiological iron oxidation) or a strictly chemical, abiotic process (photochemical iron oxidation). Similarly, an abiotic process that converts water to O2 under the action of light may be designated "photochemical oxidation of water" rather than simply "photooxidation of water", in order to distinguish it from photobiological oxidation of water potentially occurring in the same environment (by algae, for example).


Thermodynamics

Photogeochemical reactions are described by the same principles used to describe photochemical reactions in general, and may be classified similarly: # Photosynthesis: in the most general sense, photosynthesis refers to any light-activated reaction for which the change in free energy (ΔGo) is positive for the reaction itself (without considering the presence of a catalyst or light). The products have higher energy than the reactants, and therefore the reaction is thermodynamically unfavorable, except through the action of light in conjunction with a catalyst. Examples of photosynthetic reactions include the splitting of water to form H2 and O2, the reaction of CO2 and water to form O2 and reduced carbon compounds such as methanol and methane, and the reaction of N2 with water to yield NH3 and O2. # Photocatalysis: this refers to reactions that are accelerated by the presence of a catalyst (the light itself is not the catalyst as may be erroneously implied). The overall reaction has a negative change in free energy, and is therefore thermodynamically favored. Examples of photocatalytic reactions include the reaction of organic compounds with O2 to form CO2 and water, and the reaction of organic compounds with water to give H2 and CO2. # Uncatalyzed photoreactions: photoinduced or photoactivated reactions proceed via the action of light alone. For example,
photodegradation Photodegradation is the alteration of materials by light. Commonly, the term is used loosely to refer to the combined action of sunlight and air, which cause oxidation and hydrolysis. Often photodegradation is intentionally avoided, since it destro ...
of organic compounds often proceeds without a catalyst if the reactants themselves absorb light.


Nature of reactants

Any reaction in the domain of photogeochemistry, either observed in the environment or studied in the laboratory, may be broadly classified according to the nature of the materials involved. # Reactions among naturally occurring compounds. Photogeochemistry, both observational and exploratory, is concerned with reactions among materials known to occur naturally, as this reflects what happens or may happen on Earth. # Reactions in which one or more of the reactants are not known to occur naturally. Studies of reactions among materials related to naturally occurring materials may contribute to understanding of natural processes. These complementary studies are relevant to photogeochemistry in that they illustrate reactions that may have a natural counterpart. For example, it has been shown that soils, when irradiated, can generate
reactive oxygen species In chemistry, reactive oxygen species (ROS) are highly reactive chemicals formed from diatomic oxygen (). Examples of ROS include peroxides, superoxide, hydroxyl radical, singlet oxygen, and alpha-oxygen. The reduction of molecular oxygen () p ...
and that clay minerals present in soils can accelerate the degradation of synthetic chemicals; it may therefore be postulated that naturally occurring compounds are similarly affected by sunlight acting on soil. The conversion of N2 to NH3 has been observed upon irradiation in the presence of the iron titanate Fe2Ti2O7. While such a compound is not known to occur naturally, it is related to
ilmenite Ilmenite is a titanium-iron oxide mineral with the idealized formula . It is a weakly magnetic black or steel-gray solid. Ilmenite is the most important ore of titanium and the main source of titanium dioxide, which is used in paints, printing ...
(FeTiO3) and pseudobrookite (Fe2TiO5), and can form upon heating of ilmenite; this may imply a similar reaction with N2 for the naturally occurring minerals.


Photogeochemical catalysts


Direct catalysts

Direct photogeochemical catalysts act by absorbing light and subsequently transferring energy to reactants.


Semiconducting minerals

The majority of observed photogeochemical reactions involve a
mineral In geology and mineralogy, a mineral or mineral species is, broadly speaking, a solid chemical compound with a fairly well-defined chemical composition and a specific crystal structure that occurs naturally in pure form.John P. Rafferty, ed. (2 ...
catalyst. Many naturally occurring minerals are
semiconductor A semiconductor is a material which has an electrical conductivity value falling between that of a conductor, such as copper, and an insulator, such as glass. Its resistivity falls as its temperature rises; metals behave in the opposite way. ...
s that absorb some portion of solar radiation. These semiconducting minerals are frequently
transition metal In chemistry, a transition metal (or transition element) is a chemical element in the d-block of the periodic table (groups 3 to 12), though the elements of group 12 (and less often group 3) are sometimes excluded. They are the elements that ca ...
oxides and sulfides and include abundant, well-known minerals such as hematite (Fe2O3), magnetite (Fe3O4), goethite and lepidocrocite (FeOOH), and pyrolusite (MnO2). Radiation of energy equal to or greater than the
band gap In solid-state physics, a band gap, also called an energy gap, is an energy range in a solid where no electronic states can exist. In graphs of the electronic band structure of solids, the band gap generally refers to the energy difference ( ...
of a semiconductor is sufficient to excite an electron from the valence band to a higher energy level in the conduction band, leaving behind an electron hole (h+); the resulting electron-hole pair is called an exciton. The excited electron and hole can reduce and oxidize, respectively, species having suitable redox potentials relative to the potentials of the valence and conduction bands. Semiconducting minerals with appropriate band gaps and appropriate band energy levels can catalyze a vast array of reactions, most commonly at mineral-water or mineral-gas interfaces.


Organic compounds

Organic compounds such as "bio-organic substances" and humic substances are also able to absorb light and act as catalysts or sensitizers, accelerating photoreactions that normally occur slowly or facilitating reactions that might not normally occur at all.


Indirect catalysts

Some materials, such as certain
silicate minerals Silicate minerals are rock-forming minerals made up of silicate groups. They are the largest and most important class of minerals and make up approximately 90 percent of Earth's crust. In mineralogy, silica (silicon dioxide, ) is usually con ...
, absorb little or no solar radiation, but may still participate in light-driven reactions by mechanisms other than direct transfer of energy to reactants.


Production of reactive species

Indirect photocatalysis may occur via the production of a reactive species which then participates in another reaction. For example, photodegradation of certain compounds has been observed in the presence of kaolinite and montmorillonite, and this may proceed via the formation of
reactive oxygen species In chemistry, reactive oxygen species (ROS) are highly reactive chemicals formed from diatomic oxygen (). Examples of ROS include peroxides, superoxide, hydroxyl radical, singlet oxygen, and alpha-oxygen. The reduction of molecular oxygen () p ...
at the surface of these clay minerals. Indeed, reactive oxygen species have been observed when soil surfaces are exposed to sunlight. The ability of irradiated soil to generate singlet oxygen was found to be independent of the organic matter content, and both the mineral and organic components of soil appear to contribute to this process. Indirect photolysis in soil has been observed to occur at depths of up to 2 mm due to migration of reactive species; in contrast, direct photolysis (in which the degraded compound itself absorbs light) was restricted to a "photic depth" of 0.2 to 0.4 mm. Like certain minerals, organic matter in solution, as well as particulate organic matter, may act as an indirect catalyst via formation of singlet oxygen which then reacts with other compounds.


Surface sensitization

Indirect catalysts may also act through surface sensitization of reactants, by which species sorbed to a surface become more susceptible to photodegradation.


True catalysis

Strictly speaking, the term "catalysis" should not be used unless it can be shown that the number of product molecules produced per number of active sites is greater than one; this is difficult to do in practice, although it is often assumed to be true if there is no loss in the photoactivity of the catalyst for an extended period of time. Reactions that are not strictly catalytic may be designated "assisted photoreactions". Furthermore, phenomena that involve complex mixtures of compounds (e.g. soil) may be hard to classify unless complete reactions (not just individual reactants or products) can be identified.


Experimental approaches

The great majority of photogeochemical research is performed in the laboratory, as it is easier to demonstrate and observe a particular reaction under controlled conditions. This includes confirming the identity of materials, designing reaction vessels, controlling light sources, and adjusting the reaction atmosphere. However, observation of natural phenomena often provides initial inspiration for further study. For example, during the 1970s it was generally agreed that nitrous oxide (N2O) has a short residence time in the troposphere, although the actual explanation for its removal was unknown. Since N2O does not absorb light at wavelengths greater than 280 nm, direct photolysis had been discarded as a possible explanation. It was then observed that light would decompose chloromethanes when they were absorbed on silica sand, and this occurred at wavelengths far above the absorption spectra for these compounds. The same phenomenon was observed for N2O, leading to the conclusion that particulate matter in the atmosphere is responsible for the destruction of N2O via surface-sensitized photolysis. Indeed, the idea of such a sink for atmospheric N2O was supported by several reports of low concentrations of N2O in the air above deserts, where there is a high amount of suspended particulate matter. As another example, the observation that the amount of nitrous acid in the atmosphere greatly increases during the day lead to insight into the surface photochemistry of humic acids and soils and an explanation for the original observation.


Photogeochemical reactions

The following table lists some reported reactions that are relevant to photogeochemical study, including reactions that involve only naturally occurring compounds as well as complementary reactions that involve synthetic but related compounds. The selection of reactions and references given is merely illustrative and may not exhaustively reflect current knowledge, especially in the case of popular reactions such as nitrogen photofixation for which there is a large body of literature. Furthermore, although these reactions have natural counterparts, the probability of encountering optimal reaction conditions may be low in some cases; for example, most experimental work concerning CO2 photoreduction is intentionally performed in the absence of O2, since O2 almost always suppresses the reduction of CO2. In natural systems, however, it is uncommon to find an analogous context where CO2 and a catalyst are reached by light but there is no O2 present.


Reactions in the nitrogen cycle


Reactions in the

carbon cycle The carbon cycle is the biogeochemical cycle by which carbon is exchanged among the biosphere, pedosphere, geosphere, hydrosphere, and atmosphere of the Earth. Carbon is the main component of biological compounds as well as a major componen ...


Other reactions, including coupled cycles


References

{{Branches of chemistry Geochemistry Photochemistry