Lujo virus (''Mammarenavirus lujoense'') is a bisegmented
RNA virus
An RNA virus is a virus characterized by a ribonucleic acid (RNA) based genome. The genome can be single-stranded RNA (ssRNA) or double-stranded (Double-stranded RNA, dsRNA). Notable human diseases caused by RNA viruses include influenza, SARS, ...
—a member of the family ''
Arenaviridae''—and a known cause of
viral hemorrhagic fever (VHF) in humans. Its name was suggested by the Special Pathogens Unit of the National Institute for Communicable Diseases of the National Health Laboratory Service (NICD-NHLS) by using the first two letters of the names of the cities involved in the 2008 outbreak of the disease,
Lusaka
Lusaka ( ) is the Capital city, capital and largest city of Zambia. It is one of the fastest-developing cities in southern Africa. Lusaka is in the southern part of the central plateau at an elevation of about . , the city's population was abo ...
(Zambia) and
Johannesburg
Johannesburg ( , , ; Zulu language, Zulu and Xhosa language, Xhosa: eGoli ) (colloquially known as Jozi, Joburg, Jo'burg or "The City of Gold") is the most populous city in South Africa. With 5,538,596 people in the City of Johannesburg alon ...
(Republic of South Africa). It is the second pathogenic ''
Arenavirus
An arenavirus is a bi- or trisegmented ambisense RNA virus that is a member of the family ''Arenaviridae''. These viruses infect rodents and occasionally humans. A class of novel, highly divergent arenaviruses, properly known as reptarenavirus ...
'' to be described from the
Africa
Africa is the world's second-largest and second-most populous continent after Asia. At about 30.3 million km2 (11.7 million square miles) including adjacent islands, it covers 20% of Earth's land area and 6% of its total surfac ...
n continent—the first being
Lassa virus—and since 2012 has been classed as a "
Select Agent" under
U.S. law.
History
Only 5 cases of this virus have ever been reported; all 5 were identified in September and October 2008, and 4 were fatal. Those infections that proved fatal caused death within 10–13 days of showing symptoms. All four patients in which infection proved fatal first showed signs of improvement and then went into respiratory distress, displayed neurological problems, and had circulatory issues that resulted in collapse. The discovery of this novel virus was described following a highly fatal nosocomial (hospital) outbreak of VHF in Johannesburg.
The identification of this virus was the first new arenavirus discovered in over 40 years.
The first case was a female travel agent who lived in the outskirts of Lusaka. She developed a fever which grew worse with time. She was evacuated to Johannesburg for medical treatment. Almost two weeks later, the
paramedic
A paramedic is a healthcare professional trained in the medical model, whose main role has historically been to respond to emergency calls for medical help outside of a hospital. Paramedics work as part of the emergency medical services (EMS), ...
that nursed the patient on the flight to South Africa also fell ill and was also brought to Johannesburg for medical treatment. At this time the connection between these two patients was recognized by the attending
physician
A physician, medical practitioner (British English), medical doctor, or simply doctor is a health professional who practices medicine, which is concerned with promoting, maintaining or restoring health through the Medical education, study, Med ...
in the Johannesburg hospital. Together with the NICD-NHLS the clinical syndrome of VHF was recognized and specimens from the second patient were submitted for laboratory confirmation. In addition, a
cleaner and a
nurse
Nursing is a health care profession that "integrates the art and science of caring and focuses on the protection, promotion, and optimization of health and human functioning; prevention of illness and injury; facilitation of healing; and alle ...
that had contact with the first patient also fell ill. A second nurse was infected through contact with the paramedic. The outbreak had a high
case fatality rate with 4 of 5 identified cases resulting in death.
[
The Special Pathogens Unit of the NICD-NHLS together with colleagues from the Special Pathogens Unit of the U.S. ]Centers for Disease Control and Prevention
The Centers for Disease Control and Prevention (CDC) is the National public health institutes, national public health agency of the United States. It is a Federal agencies of the United States, United States federal agency under the United S ...
(CDC) identified the etiological agent of the outbreak as an Old World arenavirus using molecular and serological tests.[ Sequencing and phylogenetic investigation of partial genome sequencing indicated that this virus was not Lassavirus and likely a previously unreported arenavirus. This was corroborated by ]full genome sequencing
Whole genome sequencing (WGS), also known as full genome sequencing or just genome sequencing, is the process of determining the entirety of the DNA sequence of an organism's genome at a single time. This entails sequencing all of an organism's ...
that was conducted by the NICD-NHLS, CDC and collaborators from Columbia University
Columbia University in the City of New York, commonly referred to as Columbia University, is a Private university, private Ivy League research university in New York City. Established in 1754 as King's College on the grounds of Trinity Churc ...
in New York.
Distribution
The distribution of this newly described arenavirus is uncertain. To date this virus has only been reported from a patient from Zambia
Zambia, officially the Republic of Zambia, is a landlocked country at the crossroads of Central Africa, Central, Southern Africa, Southern and East Africa. It is typically referred to being in South-Central Africa or Southern Africa. It is bor ...
and a subsequent nosocomial outbreak in South Africa
South Africa, officially the Republic of South Africa (RSA), is the Southern Africa, southernmost country in Africa. Its Provinces of South Africa, nine provinces are bounded to the south by of coastline that stretches along the Atlantic O ...
.
Transmission
Viruses from the '' Arenaviridae'' family, to which Lujo virus belongs, almost always have a rodent reservoir
A reservoir (; ) is an enlarged lake behind a dam, usually built to water storage, store fresh water, often doubling for hydroelectric power generation.
Reservoirs are created by controlling a watercourse that drains an existing body of wa ...
, with one virus in the family having a bat reservoir. Contact with an infected rodent host, its urine or fecal matter, inhalation of dust with virus particles, or eating food containing remnants of the virus can result in human infection. Transmission can also occur via human-to-human contact, as evidenced by the 5 cases from 2008, but it is still not completely clear how the first case was contracted. Both bats and rodents should be considered possible contact points, just to be safe.[ Though it is not known for sure, it is speculated that the human-to-human transmission occurs from contact with bodily fluids. The incubation period is expected to be 7–13 days.]
Symptoms
VHF symptoms appear similar to other viruses of the same family, such as Lassa fever. The known symptoms include swelling in the neck and face, sore throat, diarrhea, and a rash resembling measles on the face and body. Blood tests of those infected revealed elevated liver values, white blood cell counts that were first low and then elevated over time, and low platelet counts.
Treatment
In-depth research into Lujo virus and its treatment have been difficult because of the lack of economic and cultural stability of the regions where the only known cases have occurred. Under treatment with oral ribavirin, patient 5 continued to deteriorate. However, the treatment shifted to ''i.v'' on day 8 and it seemed to have cured the only surviving patient with Lujo Virus, but because the 5 affected in 2008 have been the only cases identified, there has not been much opportunity for further research.[
]
Phylogenetics
Sequencing of the viral genome
A genome is all the genetic information of an organism. It consists of nucleotide sequences of DNA (or RNA in RNA viruses). The nuclear genome includes protein-coding genes and non-coding genes, other functional regions of the genome such as ...
has shown that this virus belongs to the Old World
The "Old World" () is a term for Afro-Eurasia coined by Europeans after 1493, when they became aware of the existence of the Americas. It is used to contrast the continents of Africa, Europe, and Asia in the Eastern Hemisphere, previously ...
arenavirus group. Comparisons with other viral genome sequences showed that this virus is equidistant from other Old World and New World
The term "New World" is used to describe the majority of lands of Earth's Western Hemisphere, particularly the Americas, and sometimes Oceania."America." ''The Oxford Companion to the English Language'' (). McArthur, Tom, ed., 1992. New York: ...
arenaviruses. It is distantly similar to the other pathogenic African arenavirus, Lassa fever
Lassa fever, also known as Lassa hemorrhagic fever, is a type of viral hemorrhagic fever caused by the Lassa virus. Many of those infected by the virus asymptomatic, do not develop symptoms. When symptoms occur they typically include fever, wea ...
virus.[
]
Clinical
This virus has been associated with an outbreak of five cases of VHF in September and October 2008.[ In four cases (80% of total known infections) the infection was fatal. The fifth case was treated with ribavirin early after onset of clinical disease (was detected through active contact tracing), an ]antiviral drug
Antiviral drugs are a class of medication used for treating viral infections. Most antivirals target specific viruses, while a broad-spectrum antiviral is effective against a wide range of viruses. Antiviral drugs are a class of antimicrobials ...
which is effective in treating Lassa fever
Lassa fever, also known as Lassa hemorrhagic fever, is a type of viral hemorrhagic fever caused by the Lassa virus. Many of those infected by the virus asymptomatic, do not develop symptoms. When symptoms occur they typically include fever, wea ...
, and survived; however, complete ribavirin's effectiveness against Lujo virus remains unknown but may be useful as adjunctive therapy.[
]
References
External links
Scientists have identified a lethal new virus in Africa that causes bleeding like the dreaded Ebola virus.
{{DEFAULTSORT:Lujo Virus
Viral diseases
Arenaviridae
Zoonotic viral diseases
Hemorrhagic fevers
Tropical diseases
Rodent-carried diseases