Hosoya Index
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The Hosoya index, also known as the Z index, of a
graph Graph may refer to: Mathematics *Graph (discrete mathematics), a structure made of vertices and edges **Graph theory, the study of such graphs and their properties *Graph (topology), a topological space resembling a graph in the sense of discret ...
is the total number of matchings in it. The Hosoya index is always at least one, because the
empty set In mathematics, the empty set or void set is the unique Set (mathematics), set having no Element (mathematics), elements; its size or cardinality (count of elements in a set) is 0, zero. Some axiomatic set theories ensure that the empty set exi ...
of edges is counted as a matching for this purpose. Equivalently, the Hosoya index is the number of non-empty matchings plus one. The index is named after Haruo Hosoya. It is used as a
topological index In the fields of chemical graph theory, molecular topology, and mathematical chemistry, a topological index, also known as a connectivity index, is a type of a molecular descriptor that is calculated based on the molecular graph of a chemical co ...
in
chemical graph theory Chemical graph theory is the topology branch of mathematical chemistry which applies graph theory to mathematical modelling of chemical phenomena. The pioneers of chemical graph theory are Alexandru Balaban, Ante Graovac, Iván Gutman, Haruo ...
.
Complete graph In the mathematical field of graph theory, a complete graph is a simple undirected graph in which every pair of distinct vertices is connected by a unique edge. A complete digraph is a directed graph in which every pair of distinct vertices i ...
s have the largest Hosoya index for any given number of vertices; their Hosoya indices are the
telephone numbers A telephone number is the address of a telecommunication endpoint, such as a telephone, in a telephone network, such as the public switched telephone network (PSTN). A telephone number typically consists of a sequence of digits, but histori ...
.


History

This
graph invariant Graph may refer to: Mathematics *Graph (discrete mathematics), a structure made of vertices and edges **Graph theory, the study of such graphs and their properties * Graph (topology), a topological space resembling a graph in the sense of discre ...
was introduced by Haruo Hosoya in 1971. It is often used in
chemoinformatics Cheminformatics (also known as chemoinformatics) refers to the use of physical chemistry theory with computer and information science techniques—so called "''in silico''" techniques—in application to a range of descriptive and prescriptive pr ...
for investigations of
organic compound Some chemical authorities define an organic compound as a chemical compound that contains a carbon–hydrogen or carbon–carbon bond; others consider an organic compound to be any chemical compound that contains carbon. For example, carbon-co ...
s.. In his article, "The Topological Index Z Before and After 1971," on the history of the notion and the associated inside stories, Hosoya writes that he introduced the Z index to report a good correlation of the
boiling point The boiling point of a substance is the temperature at which the vapor pressure of a liquid equals the pressure surrounding the liquid and the liquid changes into a vapor. The boiling point of a liquid varies depending upon the surrounding envi ...
s of
alkane In organic chemistry, an alkane, or paraffin (a historical trivial name that also has other meanings), is an acyclic saturated hydrocarbon. In other words, an alkane consists of hydrogen and carbon atoms arranged in a tree structure in whi ...
isomers In chemistry, isomers are molecules or polyatomic ions with identical molecular formula – that is, the same number of atoms of each element – but distinct arrangements of atoms in space. ''Isomerism'' refers to the existence or possibili ...
and their Z indices, basing on his unpublished 1957 work carried out while he was an undergraduate student at the
University of Tokyo The University of Tokyo (, abbreviated as in Japanese and UTokyo in English) is a public research university in Bunkyō, Tokyo, Japan. Founded in 1877 as the nation's first modern university by the merger of several pre-westernisation era ins ...
.


Example

A linear
alkane In organic chemistry, an alkane, or paraffin (a historical trivial name that also has other meanings), is an acyclic saturated hydrocarbon. In other words, an alkane consists of hydrogen and carbon atoms arranged in a tree structure in whi ...
, for the purposes of the Hosoya index, may be represented as a
path graph In the mathematical field of graph theory, a path graph (or linear graph) is a graph whose vertices can be listed in the order such that the edges are where . Equivalently, a path with at least two vertices is connected and has two termina ...
without any branching. A path with one vertex and no edges (corresponding to the
methane Methane ( , ) is a chemical compound with the chemical formula (one carbon atom bonded to four hydrogen atoms). It is a group-14 hydride, the simplest alkane, and the main constituent of natural gas. The abundance of methane on Earth makes ...
molecule) has one (empty) matching, so its Hosoya index is one; a path with one edge (
ethane Ethane ( , ) is a naturally occurring Organic compound, organic chemical compound with chemical formula . At standard temperature and pressure, ethane is a colorless, odorless gas. Like many hydrocarbons, ethane is List of purification methods ...
) has two matchings (one with zero edges and one with one edges), so its Hosoya index is two.
Propane Propane () is a three-carbon chain alkane with the molecular formula . It is a gas at standard temperature and pressure, but becomes liquid when compressed for transportation and storage. A by-product of natural gas processing and petroleum ref ...
(a length-two path) has three matchings: either of its edges, or the empty matching. ''n''-
butane Butane () is an alkane with the formula C4H10. Butane exists as two isomers, ''n''-butane with connectivity and iso-butane with the formula . Both isomers are highly flammable, colorless, easily liquefied gases that quickly vaporize at ro ...
(a length-three path) has five matchings, distinguishing it from
isobutane Isobutane, also known as ''i''-butane, 2-methylpropane or methylpropane, is a chemical compound with molecular formula HC(CH3)3. It is an isomer of butane. Isobutane is a colorless, odorless gas. It is the simplest alkane with a tertiary carbon a ...
which has four. More generally, a matching in a path with k edges either forms a matching in the first k-1 edges, or it forms a matching in the first k-2 edges together with the final edge of the path. This case analysis shows that the Hosoya indices of linear alkanes obey the recurrence governing the
Fibonacci number In mathematics, the Fibonacci sequence is a Integer sequence, sequence in which each element is the sum of the two elements that precede it. Numbers that are part of the Fibonacci sequence are known as Fibonacci numbers, commonly denoted . Many w ...
s, and because they also have the same base case they must equal the Fibonacci numbers. The structure of the matchings in these graphs may be visualized using a
Fibonacci cube In the mathematical field of graph theory, the Fibonacci cubes or Fibonacci networks are a family of undirected graphs with rich recursive properties derived from its origin in number theory. Mathematically they are similar to the hypercube graphs ...
. The largest possible value of the Hosoya index, on a graph with n vertices, is given by the
complete graph In the mathematical field of graph theory, a complete graph is a simple undirected graph in which every pair of distinct vertices is connected by a unique edge. A complete digraph is a directed graph in which every pair of distinct vertices i ...
K_n. The Hosoya indices for the complete graphs are the
telephone numbers A telephone number is the address of a telecommunication endpoint, such as a telephone, in a telephone network, such as the public switched telephone network (PSTN). A telephone number typically consists of a sequence of digits, but histori ...
These numbers can be expressed by a
summation In mathematics, summation is the addition of a sequence of numbers, called ''addends'' or ''summands''; the result is their ''sum'' or ''total''. Beside numbers, other types of values can be summed as well: functions, vectors, matrices, pol ...
formula involving
factorial In mathematics, the factorial of a non-negative denoted is the Product (mathematics), product of all positive integers less than or equal The factorial also equals the product of n with the next smaller factorial: \begin n! &= n \times ...
s, as \sum_^ \frac. Every graph that is not complete has a smaller Hosoya index than this
upper bound In mathematics, particularly in order theory, an upper bound or majorant of a subset of some preordered set is an element of that is every element of . Dually, a lower bound or minorant of is defined to be an element of that is less ...
.


Algorithms

The Hosoya index is #P-complete to compute, even for
planar graph In graph theory, a planar graph is a graph (discrete mathematics), graph that can be graph embedding, embedded in the plane (geometry), plane, i.e., it can be drawn on the plane in such a way that its edges intersect only at their endpoints. ...
s. However, it may be calculated by evaluating the matching polynomial ''mG'' at the argument 1. Based on this evaluation, the calculation of the Hosoya index is
fixed-parameter tractable In computer science, parameterized complexity is a branch of computational complexity theory that focuses on classifying computational problems according to their inherent difficulty with respect to ''multiple'' parameters of the input or output. ...
for graphs of bounded
treewidth In graph theory, the treewidth of an undirected graph is an integer number which specifies, informally, how far the graph is from being a tree. The smallest treewidth is 1; the graphs with treewidth 1 are exactly the trees and the forests ...
and
polynomial In mathematics, a polynomial is a Expression (mathematics), mathematical expression consisting of indeterminate (variable), indeterminates (also called variable (mathematics), variables) and coefficients, that involves only the operations of addit ...
(with an exponent that depends linearly on the width) for graphs of bounded
clique-width In graph theory, the clique-width of a graph is a parameter that describes the structural complexity of the graph; it is closely related to treewidth, but unlike treewidth it can be small for dense graphs. It is defined as the minimum number of ...
. The Hosoya index can be efficiently approximated to any desired constant
approximation ratio In computer science and operations research, approximation algorithms are efficient algorithms that find approximate solutions to optimization problems (in particular NP-hard problems) with provable guarantees on the distance of the returned sol ...
using a fully-polynomial randomized approximation scheme.


Notes


References

*Roberto Todeschini, Viviana Consonni (2000) "Handbook of Molecular Descriptors", ''
Wiley-VCH Wiley-VCH is a German publisher owned by John Wiley & Sons. It was founded in 1921 as Verlag Chemie (meaning "Chemistry Press": VCH stands for ''Verlag Chemie'') by two German learned societies A learned society ( ; also scholarly, intellect ...
'', {{ISBN, 3-527-29913-0 Graph invariants Mathematical chemistry Cheminformatics Matching (graph theory)