Forest pathology is the research of both biotic and

abiotic In biology and ecology, abiotic components or abiotic factors are non-living chemical and physical parts of the environment that affect living organisms and the functioning of ecosystems. Abiotic factors and the phenomena associated with them unde ...

maladies affecting the health of a

forest A forest is an area of land dominated by trees. Hundreds of definitions of forest are used throughout the world, incorporating factors such as tree density, tree height, land use, legal standing, and ecological function. The United Nations' ...

ecosystem An ecosystem (or ecological system) consists of all the organisms and the physical environment with which they interact. These biotic and abiotic components are linked together through nutrient cycles and energy flows. Energy enters the syst ...

, primarily fungal pathogens and their insect vectors. It is a subfield of

forestry Forestry is the science and craft of creating, managing, planting, using, conserving and repairing forests, woodlands, and associated resources for human and environmental benefits. Forestry is practiced in plantations and natural stands. Th ...

and

plant pathology Plant pathology (also phytopathology) is the scientific study of diseases in plants caused by pathogens (infectious organisms) and environmental conditions (physiological factors). Organisms that cause infectious disease include fungi, oom ...

. Forest

pathology Pathology is the study of the causes and effects of disease or injury. The word ''pathology'' also refers to the study of disease in general, incorporating a wide range of biology research fields and medical practices. However, when used in t ...

is part of the broader approach of

forest protection Forest protection is a branch of forestry which is concerned with the preservation or improvement of a forest and prevention and control of damage to forest by natural or man made causes like forest fires, plant pests, and adverse climatic cond ...

. Insects, diseases and severe weather events damaged about 40 million ha of forests in 2015, mainly in the temperate and boreal domains.

Abiotic factors

There are a number of abiotic factors which affect the health of a forest, such as moisture issues like

drought A drought is defined as drier than normal conditions.Douville, H., K. Raghavan, J. Renwick, R.P. Allan, P.A. Arias, M. Barlow, R. Cerezo-Mota, A. Cherchi, T.Y. Gan, J. Gergis, D. Jiang, A. Khan, W. Pokam Mba, D. Rosenfeld, J. Tierney, an ...

, winter-drying, waterlogging resulting from over-abundance or lack of

precipitation In meteorology, precipitation is any product of the condensation of atmospheric water vapor that falls under gravitational pull from clouds. The main forms of precipitation include drizzle, rain, Rain and snow mixed, sleet, snow, ice pellets, ...

such as

hail Hail is a form of solid precipitation. It is distinct from ice pellets (American English "sleet"), though the two are often confused. It consists of balls or irregular lumps of ice, each of which is called a hailstone. Ice pellets generally fal ...

snow Snow comprises individual ice crystals that grow while suspended in the atmosphere—usually within clouds—and then fall, accumulating on the ground where they undergo further changes. It consists of frozen crystalline water throughout ...

rain Rain is water droplets that have condensed from atmospheric water vapor and then fall under gravity. Rain is a major component of the water cycle and is responsible for depositing most of the fresh water on the Earth. It provides water fo ...

. Wind is also an important abiotic factor as

windthrow In forestry, windthrow refers to trees uprooted by wind. Breakage of the tree bole (trunk) instead of uprooting is called windsnap. Blowdown refers to both windthrow and windsnap. Causes Windthrow is common in all forested parts of the w ...

(the uprooting or breaking of trees due to high winds) causes an obvious and direct loss of stability to a forest or its trees. Often, abiotic factors and biotic factors will affect a forest at the same time. For example, if wind speed is 80 km per hour then many trees which have

root rot Root rot is a condition in which anoxic conditions in the soil or potting media around the roots of a plant cause them to rot. This occurs due to excessive standing water around the roots. It is found in both indoor and outdoor plants, althoug ...

(caused by a pathogen) are likely to be thrown. Higher wind speeds are necessary to damage healthier trees.

Fire Fire is the rapid oxidation of a material (the fuel) in the exothermic chemical process of combustion, releasing heat, light, and various reaction Product (chemistry), products. At a certain point in the combustion reaction, called the ignition ...

, whether caused by humans or

lightning Lightning is a naturally occurring electrostatic discharge during which two electrically charged regions, both in the atmosphere or with one on the ground, temporarily neutralize themselves, causing the instantaneous release of an average ...

, and related abiotic factors also affect the health of forest. The effects of man often alter a forest's predisposition to damage from both abiotic and biotic effects. For example, soil properties may be altered by heavy machinery. ;Other abiotic factors *Nutrient imbalances: deficiencies, chemicals ( toxic salts,

herbicides Herbicides (, ), also commonly known as weedkillers, are substances used to control undesired plants, also known as weeds.EPA. February 201Pesticides Industry. Sales and Usage 2006 and 2007: Market Estimates. Summary in press releasMain page fo ...

air pollutants Air pollution is the contamination of air due to the presence of substances in the atmosphere that are harmful to the health of humans and other living beings, or cause damage to the climate or to materials. There are many different types ...

) *

Stemflow In hydrology, stemflow is the flow of intercepted water down the trunk or stem of a plant. Stemflow, along with throughfall, is responsible for the transferral of precipitation and nutrients from the canopy to the soil. In tropical rainforests, ...

which can concentrate dry deposits which via

soil acidification Soil acidification is the buildup of hydrogen cations, which reduces the soil pH. Chemically, this happens when a proton donor gets added to the soil. The donor can be an acid, such as nitric acid, sulfuric acid, or carbonic acid. It can also be a ...

can kill surrounding plants. *

Temperature Temperature is a physical quantity that expresses quantitatively the perceptions of hotness and coldness. Temperature is measurement, measured with a thermometer. Thermometers are calibrated in various Conversion of units of temperature, temp ...

Biotic factors

Fungi A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from t ...

Ascomycota Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The defi ...

Basidiomycota Basidiomycota () is one of two large divisions that, together with the Ascomycota, constitute the subkingdom Dikarya (often referred to as the "higher fungi") within the kingdom Fungi. Members are known as basidiomycetes. More specifically, Basi ...

and

Fungi imperfecti The fungi imperfecti or imperfect fungi, are fungi which do not fit into the commonly established taxonomic classifications of fungi that are based on biological species concepts or morphological characteristics of sexual structures because the ...

There is a category listing fungal tree pathogens and diseases in Wikipedia. *

Oomycota Oomycota forms a distinct phylogenetic lineage of fungus-like eukaryotic microorganisms, called oomycetes (). They are filamentous and heterotrophic, and can reproduce both sexually and asexually. Sexual reproduction of an oospore is the r ...

Phytophthora ''Phytophthora'' (from Greek (''phytón''), "plant" and (), "destruction"; "the plant-destroyer") is a genus of plant-damaging oomycetes (water molds), whose member species are capable of causing enormous economic losses on crops worldwide, a ...

* Bacteria * Phytoplasmas *

Viruses A virus is a submicroscopic infectious agent that replicates only inside the living cells of an organism. Viruses infect all life forms, from animals and plants to microorganisms, including bacteria and archaea. Since Dmitri Ivanovsky's ...

;Insects There is a category listing insect pests of temperate forests in Wikipedia. * Ips (genus) bark beetles *

Bark beetle A bark beetle is the common name for the subfamily of beetles Scolytinae. Previously, this was considered a distinct family (Scolytidae), but is now understood to be a specialized clade of the "true weevil" family (Curculionidae). Although the ...

Ambrosia beetle Ambrosia beetles are beetles of the weevil subfamilies Scolytinae and Platypodinae (Coleoptera, Curculionidae), which live in nutritional symbiosis with ambrosia fungi. The beetles excavate tunnels in dead, stressed, and healthy trees in which t ...

Cerambycidae The longhorn beetles (Cerambycidae), also known as long-horned or longicorns, are a large family of beetles, with over 35,000 species described. Most species are characterized by extremely long antennae, which are often as long as or longer than ...

* Black arches Some of these factors act in concert (all do to a degree). For example, '' Amylostereum areolatum'' is spread by the

sirex woodwasp The sirex woodwasp (''Sirex noctilio'') is a species of horntail, native to Europe, Asia, and northern Africa.New York State Department of Environmental Conservation, Copyright © 2011. Sirex Woodwasp – ''Sirex noctilio''. http://www.dec.ny.go ...

. The fungus gains access to new trees to live off, and the woodwasp larvae gain food.

Parasitic flowering plants

Many plants can parasitize trees via root to root contact. Many of these parasitic plants originate in the tropical and subtropical climates.

Animals

Nematode The nematodes ( or grc-gre, Νηματώδη; la, Nematoda) or roundworms constitute the phylum Nematoda (also called Nemathelminthes), with plant- parasitic nematodes also known as eelworms. They are a diverse animal phylum inhabiting a bro ...

insect Insects (from Latin ') are pancrustacean hexapod invertebrates of the class Insecta. They are the largest group within the arthropod phylum. Insects have a chitinous exoskeleton, a three-part body (head, thorax and abdomen), three pairs of ...

s especially

bark beetle A bark beetle is the common name for the subfamily of beetles Scolytinae. Previously, this was considered a distinct family (Scolytidae), but is now understood to be a specialized clade of the "true weevil" family (Curculionidae). Although the ...

mammal Mammals () are a group of vertebrate animals constituting the class Mammalia (), characterized by the presence of mammary glands which in females produce milk for feeding (nursing) their young, a neocortex (a region of the brain), fur or ...

s may

browse Browsing is a kind of orienting strategy. It is supposed to identify something of relevance for the browsing organism. When used about human beings it is a metaphor taken from the animal kingdom. It is used, for example, about people browsing o ...

. Browsing can be prevented with tree shelters. Humans and other mammals predate on trees, and on unsustainable, especially industrial scales, these are demonstrably pathological to the forest. Additionally, poorly planned but conventionally replanted (post-cut) forest plantations are typically monocropped, and highly susceptible to further insect or fungal infection due to low

biodiversity Biodiversity or biological diversity is the variety and variability of life on Earth. Biodiversity is a measure of variation at the genetic (''genetic variability''), species (''species diversity''), and ecosystem (''ecosystem diversity'') le ...

and diminished capacity for community resilience - see the " Wood wide web". Part of forest pathology is forest

entomology Entomology () is the scientific study of insects, a branch of zoology. In the past the term "insect" was less specific, and historically the definition of entomology would also include the study of animals in other arthropod groups, such as arac ...

. Forest entomology includes the study of all insects and

arthropods Arthropods (, (gen. ποδός)) are invertebrate animals with an exoskeleton, a Segmentation (biology), segmented body, and paired jointed appendages. Arthropods form the phylum Arthropoda. They are distinguished by their jointed limbs and Arth ...

, such as mites, centipedes and millipedes, which live in and interact in forest ecosystems. Forest entomology also includes the management of insect pests that cause the degrading, defoliation, crown die-back or death of trees. Thus the scope is wide and includes: * Documentation of all insect species and related arthropods in natural and man-made forests, and the study and ecology of those species. * Description and assessment of damage to tree structures (parts of a tree), to forest stands, landscape effects and to wood products, timber in service and other

ecosystem services Ecosystem services are the many and varied benefits to humans provided by the natural environment and healthy ecosystems. Such ecosystems include, for example, agroecosystems, forest ecosystem, grassland ecosystems, and aquatic ecosystems. ...

. * Eradication of recently introduced pests, or long-term management of established exotics and indigenous pests, to minimise losses in wood quality and wood production, and to reduce tree mortality. * Assessments of forest operations, or of management impacts, on the invertebrate fauna, and the alleviation of any adverse effects on these invertebrates.Christian Stauffer, Lecture on Forest Protection 2013, Institute of Forest Entomology, Forest Pathology and Forest Protection, Department of Forest and Soil Sciences, University of Natural Resources and Applied Life Sciences, Vienna, Hasenauerstraße 38, A-1190 Vienna.

Hazard trees

The likelihood of property damage or personal injury due to tree failure. Hazard includes not only the tree's condition, but the potential target as well. Rating systems, procedures and guidelines have been developed for decision making but knowledge, judgement, and experience are an important part to the process.

Pathogens that affect trees

There is a category listing tree diseases in Wikipedia. * ''

Armillaria ''Armillaria'' is a genus of fungi that includes the '' A. mellea'' species known as honey fungi that live on trees and woody shrubs. It includes about 10 species formerly categorized summarily as ''A. mellea''. ''Armillarias'' are long-l ...

'', which causes white rot root disease * '' Cenangium'' * '' Hymenoscyphus fraxineus'', which causes Ash Dieback * '' Heterobasidion annosum'', which causes Annosum or red root rot, the economically most significant pathogen in the Northern hemisphere. *

Chestnut blight The pathogenic fungus ''Cryphonectria parasitica'' (formerly ''Endothia parasitica'') is a member of the Ascomycota (sac fungi). This necrotrophic fungus is native to East Asia and South East Asia and was introduced into Europe and North America ...

* ''

Rickettsia ''Rickettsia'' is a genus of nonmotile, gram-negative, nonspore-forming, highly pleomorphic bacteria that may occur in the forms of cocci (0.1 μm in diameter), bacilli (1–4 μm long), or threads (up to about 10 μm long). The term "ricket ...

'', which causes possibly this citrus greening disease * ''

Spiroplasma ''Spiroplasma'' is a genus of Mollicutes, a group of small bacteria without cell walls. ''Spiroplasma'' shares the simple metabolism, parasitic lifestyle, fried-egg colony morphology and small genome of other ''Mollicutes'', but has a distinctive ...

'' *

Dutch elm disease Dutch elm disease (DED) is caused by a member of the sac fungi (Ascomycota) affecting elm trees, and is spread by elm bark beetles. Although believed to be originally native to Asia, the disease was accidentally introduced into America, Europe, ...

* Ink disease *

Emerald ash borer The emerald ash borer (''Agrilus planipennis''), also known by the acronym EAB, is a green buprestid or jewel beetle native to north-eastern Asia that feeds on ash species. Females lay eggs in bark crevices on ash trees, and larvae feed underne ...

* Olive tree pathology *

Witch's broom Witch's broom or witches' broom is a deformity in a woody plant, typically a tree, where the natural structure of the plant is changed. A dense mass of shoots grows from a single point, with the resulting structure resembling a broom or a ...

White Pine Blister Rust ''Cronartium ribicola'' is a species of rust fungus in the family Cronartiaceae that causes the disease white pine blister rust. Other names include: (French), (German), (Spanish). ''Cronartium ribicola'' is native to China, and was subsequ ...

* ''

Phytophthora cinnamomi ''Phytophthora cinnamomi'' is a soil-borne water mould that produces an infection which causes a condition in plants variously called "root rot", "dieback", or (in certain '' Castanea'' species), "ink disease". The plant pathogen is one of the w ...

'', which causes root rot * ''

Phytophthora ramorum ''Phytophthora ramorum'' is the oomycete (a type of protist) plant pathogen known to cause the disease sudden oak death (SOD). The disease kills oak and other species of trees and has had devastating effects on the oak populations in California a ...

'', which causes

sudden oak death James Green aka "Sudden" is a fictional character created by an English author Oliver Strange in the early 1930s as the hero of a series, originally published by George Newnes Books Ltd, set in the American Wild West era. Oliver Strange died i ...

Polypore Polypores are a group of fungi that form large fruiting bodies with pores or tubes on the underside (see Delimitation for exceptions). They are a morphological group of basidiomycetes-like gilled mushrooms and hydnoid fungi, and not all polypo ...

bracket fungus A bracket is either of two tall fore- or back-facing punctuation marks commonly used to isolate a segment of text or data from its surroundings. Typically deployed in symmetric pairs, an individual bracket may be identified as a 'left' or 'r ...

* Tinder conk

Signs and symptoms

Symptoms are a result of a pathogen: *

Blight Blight refers to a specific symptom affecting plants in response to infection by a pathogenic organism. Description Blight is a rapid and complete chlorosis, browning, then death of plant tissues such as leaves, branches, twigs, or floral orga ...

Burl A burl (American English) or burr (British English) is a tree growth in which the grain has grown in a deformed manner. It is commonly found in the form of a rounded outgrowth on a tree trunk or branch that is filled with small knots from d ...

Canker A plant canker is a small area of dead tissue, which grows slowly, often over years. Some cankers are of only minor consequence, but others are ultimately lethal and therefore can have major economic implications for agriculture and horticultur ...

Chlorosis In botany, chlorosis is a condition in which leaves produce insufficient chlorophyll. As chlorophyll is responsible for the green color of leaves, chlorotic leaves are pale, yellow, or yellow-white. The affected plant has little or no ability to ...

Drunken trees Drunken trees, tilted trees, or a drunken forest, is a stand of trees rotated from their normal vertical alignment. This most commonly occurs in northern subarctic taiga forests of black spruce (''Picea mariana'') under which discontinuous perma ...

Forest dieback Forest dieback (also "", a German loan word) is a condition in trees or woody plants in which peripheral parts are killed, either by pathogens, parasites or conditions like acid rain, drought, and more. These episodes can have disastrous conseq ...

Gall Galls (from the Latin , 'oak-apple') or ''cecidia'' (from the Greek , anything gushing out) are a kind of swelling growth on the external tissues of plants, fungi, or animals. Plant galls are abnormal outgrowths of plant tissues, similar to be ...

Girdling Girdling, also called ring-barking, is the complete removal of the bark (consisting of cork cambium or "phellogen", phloem, cambium and sometimes going into the xylem) from around the entire circumference of either a branch or trunk of a woody ...

Leaf scorch Leaf scorch (also called leaf burn, leaf wilt, and sun scorch) is defined as a browning of plant tissues, including leaf margins and tips, and yellowing or darkening of veins which may lead to eventual wilting and abscission of the leaf.

Root rot Root rot is a condition in which anoxic conditions in the soil or potting media around the roots of a plant cause them to rot. This occurs due to excessive standing water around the roots. It is found in both indoor and outdoor plants, althoug ...

Virescence Virescence is the abnormal development of green pigmentation in plant parts that are not normally green, like shoots or flowers (in which case it is known as floral virescence). Virescence is closely associated with phyllody (the abnormal developme ...

Wilt disease A wilt disease is any number of diseases that affect the vascular system of plants. Attacks by fungi, bacteria, and nematodes can cause rapid killing of plants, large tree branches or even entire trees. Wilt diseases in woody plants tend to fa ...

Signs are the visible presence of a part of a pathogen: *

Ascus An ascus (; ) is the sexual spore-bearing cell produced in ascomycete fungi. Each ascus usually contains eight ascospores (or octad), produced by meiosis followed, in most species, by a mitotic cell division. However, asci in some genera or ...

is a part of an

ascomycota Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The defi ...

fungus. *

Conk (fungi) Polypores are a group of fungi that form large fruiting bodies with pores or tubes on the underside (see Delimitation for exceptions). They are a morphological group of basidiomycetes-like gilled mushrooms and hydnoid fungi, and not all polypo ...

is the fruiting body of a bracket fungus. *

Hypha A hypha (; ) is a long, branching, filamentous structure of a fungus, oomycete, or actinobacterium. In most fungi, hyphae are the main mode of vegetative growth, and are collectively called a mycelium. Structure A hypha consists of one or ...

are collectively called a

mycelium Mycelium (plural mycelia) is a root-like structure of a fungus consisting of a mass of branching, thread-like hyphae. Fungal colonies composed of mycelium are found in and on soil and many other substrates. A typical single spore germinates in ...

Mycelial cord Mycelial cords are linear aggregations of parallel-oriented hyphae. The mature cords are composed of wide, empty vessel hyphae surrounded by narrower sheathing hyphae. Cords may look similar to plant roots, and also frequently have similar function ...

or rhizomorphs

Pathology detection

This can be done by machines or by dogs smelling the trees, similar to the methods used to find

truffles A truffle is the fruiting body of a subterranean ascomycete fungus, predominantly one of the many species of the genus ''Tuber''. In addition to ''Tuber'', many other genera of fungi are classified as truffles including '' Geopora'', ''Peziz ...

. It can also be done by monitoring and identification can happen via tree clinics, experts such as

arborist An arborist, tree surgeon, or (less commonly) arboriculturist, is a professional in the practice of arboriculture, which is the cultivation, management, and study of individual trees, shrubs, vines, and other perennial woody plants in dendrolo ...

s or even non-experts through

citizen science Citizen science (CS) (similar to community science, crowd science, crowd-sourced science, civic science, participatory monitoring, or volunteer monitoring) is scientific research conducted with participation from the public (who are sometimes re ...

. It is important to consider the disease triangle when evaluating pathologies. Demonstration of suspected active agents can be done by confirmation of

Koch's postulates Koch's postulates ( )"Koch"
''

Allelopathy Allelopathy is a biological phenomenon by which an organism produces one or more biochemicals that influence the germination, growth, survival, and reproduction of other organisms. These biochemicals are known as allelochemicals and can have ben ...

Disease A disease is a particular abnormal condition that negatively affects the structure or function of all or part of an organism, and that is not immediately due to any external injury. Diseases are often known to be medical conditions that ar ...

Etiology Etiology (pronounced ; alternatively: aetiology or ætiology) is the study of causation or origination. The word is derived from the Greek (''aitiología'') "giving a reason for" (, ''aitía'', "cause"); and ('' -logía''). More completely, e ...

Disturbance (ecology) In ecology, a disturbance is a temporary change in environmental conditions that causes a pronounced change in an ecosystem. Disturbances often act quickly and with great effect, to alter the physical structure or arrangement of biotic and abiotic ...

* Forest IPM * Glossary of phytopathology * Lists of invasive species *

Outline of forestry The following outline is provided as an overview of and guide to forestry: Forestry – science and craft of creating, managing, using, conserving, and repairing forests and associated resources to meet desired goals, needs, and values for ...

Pest (organism) A pest is any animal or plant harmful to humans or human concerns. The term is particularly used for creatures that damage crops, livestock, and forestry or cause a nuisance to people, especially in their homes. Humans have modified the environ ...

Plant disease epidemiology Plant disease epidemiology is the study of disease in plant populations. Much like diseases of humans and other animals, plant diseases occur due to pathogens such as bacteria, viruses, fungi, oomycetes, nematodes, phytoplasmas, protozoa, and par ...

* Robert Hartig * ''Forest Pathology'' (journal) *

Secondary forest A secondary forest (or second-growth forest) is a forest or woodland area which has re-grown after a timber harvest or clearing for agriculture, until a long enough period has passed so that the effects of the disturbance are no longer evident. ...

* Sanitation harvest

Sources

References

External links

Forest & Shade Tree Pathology

Forest pathology team at INRA Nancy, France

Hazard Trees
{{Authority control Tree diseases