Darwin's Black Box
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''Darwin's Black Box: The Biochemical Challenge to Evolution'' (1996; second edition 2006) is a book by Michael J. Behe, a professor of biochemistry at
Lehigh University Lehigh University (LU), in Bethlehem, Pennsylvania, United States, is a private university, private research university. The university was established in 1865 by businessman Asa Packer. Lehigh University's undergraduate programs have been mixed ...
in
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and a senior fellow of the
Discovery Institute The Discovery Institute (DI) is a conservatism in the United States, politically conservative think tank that advocates the pseudoscience, pseudoscientific concept Article available froUniversiteit Gent of intelligent design (ID). It was fou ...
's
Center for Science and Culture The Center for Science and Culture (CSC), formerly known as the Center for the Renewal of Science and Culture (CRSC), is part of the Discovery Institute (DI), a conservative Christian think tank in the United States. The CSC lobbies for the inc ...
. In the book Behe presents his notion of
irreducible complexity Irreducible complexity (IC) is the argument that certain biological systems with multiple interacting parts would not function if one of the parts were removed, so supposedly could not have evolved by successive small modifications from earlier ...
and argues that its presence in many biochemical systems therefore indicates that they must be the result of
intelligent design Intelligent design (ID) is a pseudoscientific argument for the existence of God, presented by its proponents as "an evidence-based scientific theory about life's origins".#Numbers 2006, Numbers 2006, p. 373; " Dcaptured headlines for it ...
rather than
evolutionary processes Evolution is the change in the heritable characteristics of biological populations over successive generations. It occurs when evolutionary processes such as natural selection and genetic drift act on genetic variation, resulting in certai ...
. In 1993, Behe had written a chapter on
blood clotting Coagulation, also known as clotting, is the process by which blood changes from a liquid to a gel, forming a thrombus, blood clot. It results in hemostasis, the cessation of blood loss from a damaged vessel, followed by repair. The process of co ...
in ''
Of Pandas and People ''Of Pandas and People: The Central Question of Biological Origins'' is a controversial 1989 (2nd edition 1993) school-level supplementary textbook written by Percival Davis and Dean H. Kenyon, edited by Charles Thaxton and published by the Te ...
,'' presenting essentially the same arguments but without the name "irreducible complexity," which he later presented in very similar terms in a chapter in ''Darwin's Black Box.'' Behe later agreed that he had written both and agreed to the similarities when he defended intelligent design at the '' Kitzmiller v. Dover Area School District'' trial. The book has received highly critical reviews by many scientists, arguing that the assertions made by Behe fail with logical scrutiny and amount to
pseudoscience Pseudoscience consists of statements, beliefs, or practices that claim to be both scientific and factual but are incompatible with the scientific method. Pseudoscience is often characterized by contradictory, exaggerated or unfalsifiable cl ...
. For example, in a review for ''
Nature Nature is an inherent character or constitution, particularly of the Ecosphere (planetary), ecosphere or the universe as a whole. In this general sense nature refers to the Scientific law, laws, elements and phenomenon, phenomena of the physic ...
'',
Jerry Coyne Jerry Allen Coyne (born December 30, 1949) is an American biologist and skeptic known for his work on speciation and his commentary on intelligent design. A professor emeritus at the University of Chicago in the Department of Ecology and Evolu ...
panned the book for what he saw as usage of
quote mining Quoting out of context (sometimes referred to as contextomy or quote mining) is an informal fallacy in which a passage is removed from its surrounding matter in such a way as to distort its intended meaning. Context may be omitted intentionally or ...
and spurious
ad hominem , short for , refers to several types of arguments that are usually fallacious. Often currently this term refers to a rhetorical strategy where the speaker attacks the character, motive, or some other attribute of the person making an argument ...
attacks. ''
The New York Times ''The New York Times'' (''NYT'') is an American daily newspaper based in New York City. ''The New York Times'' covers domestic, national, and international news, and publishes opinion pieces, investigative reports, and reviews. As one of ...
'' also, in a critique written by
Richard Dawkins Richard Dawkins (born 26 March 1941) is a British evolutionary biology, evolutionary biologist, zoologist, science communicator and author. He is an Oxford fellow, emeritus fellow of New College, Oxford, and was Simonyi Professor for the Publ ...
, condemned the book for having promoted discredited arguments. Despite this, the book has become a commercial success, and, as a bestseller, it received a mostly supportive review from ''
Publishers Weekly ''Publishers Weekly'' (''PW'') is an American weekly trade news magazine targeted at publishers, librarians, booksellers, and literary agents. Published continuously since 1872, it has carried the tagline, "The International News Magazine of ...
'', which described it as having a "spirited, witty critique of neo-Darwinian thinking" that may "spark interest." The
politically conservative Conservatism is a cultural, social, and political philosophy and ideology that seeks to promote and preserve traditional institutions, customs, and values. The central tenets of conservatism may vary in relation to the culture and civilizati ...
magazine ''
National Review ''National Review'' is an American conservative editorial magazine, focusing on news and commentary pieces on political, social, and cultural affairs. The magazine was founded by William F. Buckley Jr. in 1955. Its editor-in-chief is Rich L ...
'' also voted ''Darwin's Black Box'' one of their top 100 non-fiction books of the century, using a panel that included
Discovery Institute The Discovery Institute (DI) is a conservatism in the United States, politically conservative think tank that advocates the pseudoscience, pseudoscientific concept Article available froUniversiteit Gent of intelligent design (ID). It was fou ...
member
George Gilder George Franklin Gilder (; born November 29, 1939) is an American investor, author, economist, and co-founder of the Discovery Institute. His 1981 book, '' Wealth and Poverty'', advanced a case for supply-side economics and capitalism during the e ...
.


Summary

The "
black box In science, computing, and engineering, a black box is a system which can be viewed in terms of its inputs and outputs (or transfer characteristics), without any knowledge of its internal workings. Its implementation is "opaque" (black). The te ...
" in the title refers to the conceptual tool in which, for one reason or another, the internal workings of a device are taken for granted, so that its function may be discussed. The philosophical tool is commonly used in scientific discourse, and Behe notes that understandings of cellular structure and other aspects of
microbiology Microbiology () is the branches of science, scientific study of microorganisms, those being of unicellular organism, unicellular (single-celled), multicellular organism, multicellular (consisting of complex cells), or non-cellular life, acellula ...
were not much understood when
Charles Darwin Charles Robert Darwin ( ; 12 February 1809 – 19 April 1882) was an English Natural history#Before 1900, naturalist, geologist, and biologist, widely known for his contributions to evolutionary biology. His proposition that all speci ...
was alive. He then states that he plans to delve into the issue. Behe begins by reminding the general reader of
paradigm shift A paradigm shift is a fundamental change in the basic concepts and experimental practices of a scientific discipline. It is a concept in the philosophy of science that was introduced and brought into the common lexicon by the American physicist a ...
s in the
history of science The history of science covers the development of science from ancient history, ancient times to the present. It encompasses all three major branches of science: natural science, natural, social science, social, and formal science, formal. Pr ...
, in which the foundations and assumptions of theories are examined, sometimes resulting in the rejection of an entire past theory. Behe suggests that such a paradigm shift in biology (and particularly in
evolution Evolution is the change in the heritable Phenotypic trait, characteristics of biological populations over successive generations. It occurs when evolutionary processes such as natural selection and genetic drift act on genetic variation, re ...
) is imminent due to recent discoveries (circa 1996) in
biochemistry Biochemistry, or biological chemistry, is the study of chemical processes within and relating to living organisms. A sub-discipline of both chemistry and biology, biochemistry may be divided into three fields: structural biology, enzymology, a ...
. Behe acknowledges acceptance of the theory of evolution by "the great majority" of scientists, and he states that "most (though not all) do so based on authority." Behe states that elucidations of the evolutionary history of various biological features typically assume the existence of certain abilities as their starting point, such as
Charles Darwin Charles Robert Darwin ( ; 12 February 1809 – 19 April 1882) was an English Natural history#Before 1900, naturalist, geologist, and biologist, widely known for his contributions to evolutionary biology. His proposition that all speci ...
's example of a cluster of light-sensitive spots evolving into an
eye An eye is a sensory organ that allows an organism to perceive visual information. It detects light and converts it into electro-chemical impulses in neurons (neurones). It is part of an organism's visual system. In higher organisms, the ey ...
via a series of intermediate steps. He then points out that Darwin dismissed the need to explain the origin of the 'simple' light-sensitive spot, summarizes the modern understanding of the biochemistry of vision and claims that many other evolutionary explanations face a similar challenge. Behe next introduces and defines the concept of
irreducible complexity Irreducible complexity (IC) is the argument that certain biological systems with multiple interacting parts would not function if one of the parts were removed, so supposedly could not have evolved by successive small modifications from earlier ...
as a system with a series of parts in which the removal of any part causes the entire system to cease functioning, offering a spring-loaded bar mousetrap as a familiar example. In the following chapters, Behe discusses the apparent irreducible complexity of several biological systems, including the
cilium The cilium (: cilia; ; in Medieval Latin and in anatomy, ''cilium'') is a short hair-like membrane protrusion from many types of eukaryotic cell. (Cilia are absent in bacteria and archaea.) The cilium has the shape of a slender threadlike pr ...
, the bacterial
flagellum A flagellum (; : flagella) (Latin for 'whip' or 'scourge') is a hair-like appendage that protrudes from certain plant and animal sperm cells, from fungal spores ( zoospores), and from a wide range of microorganisms to provide motility. Many pr ...
,
blood clotting Coagulation, also known as clotting, is the process by which blood changes from a liquid to a gel, forming a thrombus, blood clot. It results in hemostasis, the cessation of blood loss from a damaged vessel, followed by repair. The process of co ...
, the
immune system The immune system is a network of biological systems that protects an organism from diseases. It detects and responds to a wide variety of pathogens, from viruses to bacteria, as well as Tumor immunology, cancer cells, Parasitic worm, parasitic ...
, and
vesicular transport A vesicular transport protein, or vesicular transporter, is a membrane protein that regulates or facilitates the movement of specific molecules across a vesicle's membrane. As a result, vesicular transporters govern the concentration of molecules ...
. Behe claims the underlying complexity and biochemical mechanisms of the systems are vastly under-appreciated, and identifies other, similar systems. Behe identifies one of the primary counter-arguments of irreducible complexity, gradual adaptation—that certain systems may have been co-opted from an original, unrelated role to assume a new function as an irreducibly complex system. He counter-argues that though it is impossible to consider all possible roles for any component, it is extremely implausible that components can fortuitously change function within a complex system and that the focus of the theory changes from making to modifying components and recounts unsuccessful attempts to discover evolutionary pathways for complex systems within
scientific journal In academic publishing, a scientific journal is a periodical publication designed to further the progress of science by disseminating new research findings to the scientific community. These journals serve as a platform for researchers, schola ...
s. Behe states that though he did identify assertions that evolution had occurred, he found none that had been supported by experiment or calculation, and concludes the book by offering
intelligent design Intelligent design (ID) is a pseudoscientific argument for the existence of God, presented by its proponents as "an evidence-based scientific theory about life's origins".#Numbers 2006, Numbers 2006, p. 373; " Dcaptured headlines for it ...
as a solution to irreducible complexity.


Reception

''Darwin's Black Box'' was not well received by the
scientific community The scientific community is a diverse network of interacting scientists. It includes many "working group, sub-communities" working on particular scientific fields, and within particular institutions; interdisciplinary and cross-institutional acti ...
, which rejected Behe's premises and arguments. Kenneth Miller described Behe's argument as an updated version of the
argument from design The teleological argument (from ) also known as physico-theological argument, argument from design, or intelligent design argument, is a rational argument for the existence of God or, more generally, that complex functionality in the natural worl ...
with reference to biochemistry (which was echoed by other reviewers), and also cites areas in biochemistry and the fossil record which demonstrate currently irreducibly complex systems evolving. Miller also describes Behe's theory as
unfalsifiable Falsifiability (or refutability) is a deductive standard of evaluation of scientific theories and hypotheses, introduced by the philosopher of science Karl Popper in his book '' The Logic of Scientific Discovery'' (1934). A theory or hypothesi ...
, arguing that it arbitrarily ignores evidence that shows the evolution of a biochemical system. On his
blog A blog (a Clipping (morphology), truncation of "weblog") is an informational website consisting of discrete, often informal diary-style text entries also known as posts. Posts are typically displayed in Reverse chronology, reverse chronologic ...
,
PZ Myers Paul Zachary Myers (born March 9, 1957) is an American biologist who founded and writes the '' Pharyngula'' science blog. He is associate professor of biology at the University of Minnesota Morris (UMM)
described it as "...an example of pseudoscientific
dreck This is a list of words that have entered the English language from the Yiddish language, many of them by way of American English. There are differing approaches to the romanization of Yiddish orthography (which uses the Hebrew alphabet); thus ...
that has been enormously influential." In a review for ''
Nature Nature is an inherent character or constitution, particularly of the Ecosphere (planetary), ecosphere or the universe as a whole. In this general sense nature refers to the Scientific law, laws, elements and phenomenon, phenomena of the physic ...
'',
Jerry Coyne Jerry Allen Coyne (born December 30, 1949) is an American biologist and skeptic known for his work on speciation and his commentary on intelligent design. A professor emeritus at the University of Chicago in the Department of Ecology and Evolu ...
described the book hailing from 'populist' creationism that failed to deal with the evidence for evolution honestly. Coyne also accuses Behe of
quote mining Quoting out of context (sometimes referred to as contextomy or quote mining) is an informal fallacy in which a passage is removed from its surrounding matter in such a way as to distort its intended meaning. Context may be omitted intentionally or ...
and using
ad hominem , short for , refers to several types of arguments that are usually fallacious. Often currently this term refers to a rhetorical strategy where the speaker attacks the character, motive, or some other attribute of the person making an argument ...
attacks against scientists while 'timidly accepting' evolution. A review on the pro-evolution website
talk.origins talk.origins (often capitalised to Talk.Origins or abbreviated as t.o.) is a Usenet discussion forum concerning the origins of life, and evolution. Its official purpose is to draw such debates out of the science newsgroups, such as sci.bio.evo ...
, described the book as "...an exposition of the Frontiers of Ignorance" and that within it systems were labeled "irreducibly complex" if ''Behe'' was not able to envision a simpler system that still worked. The review also stated that the theory was
unfalsifiable Falsifiability (or refutability) is a deductive standard of evaluation of scientific theories and hypotheses, introduced by the philosopher of science Karl Popper in his book '' The Logic of Scientific Discovery'' (1934). A theory or hypothesi ...
(echoing Miller), with faulty logic that worked because Behe did not provide crucial facts that would illustrate its failings.
H. Allen Orr H. Allen Orr (born 1960) is the Shirley Cox Kearns Professor of Biology at the University of Rochester. Education and career Orr earned his bachelor's degree in Biology and Philosophy from the College of William and Mary and his Ph.D. in Biolog ...
has called Behe's argument in the book "...just plain wrong," arguing that gradual adaptation could produce irreducibly complex systems. Orr points to examples of gradual adaptation already known (citing to the work of
H. J. Muller Hermann Joseph Muller (December 21, 1890 – April 5, 1967) was an American geneticist who was awarded the 1946 Nobel Prize in Physiology or Medicine, "for the discovery that mutations can be induced by X-rays". Muller warned of long-term dange ...
in the early 20th century). Behe is also criticized for claiming a conspiracy of silence among scientists regarding the 'failure of Darwinism'.
Richard Dawkins Richard Dawkins (born 26 March 1941) is a British evolutionary biology, evolutionary biologist, zoologist, science communicator and author. He is an Oxford fellow, emeritus fellow of New College, Oxford, and was Simonyi Professor for the Publ ...
criticized the book for ''The New York Times'' as being logically flawed by setting up a
false dichotomy A false dilemma, also referred to as false dichotomy or false binary, is an informal fallacy based on a premise that erroneously limits what options are available. The source of the fallacy lies not in an invalid form of inference but in a false ...
in which Darwinian evolution is rejected despite an enormous amount of positive evidence due to a single apparent failure to explain
irreducible complexity Irreducible complexity (IC) is the argument that certain biological systems with multiple interacting parts would not function if one of the parts were removed, so supposedly could not have evolved by successive small modifications from earlier ...
. Dawkins further commented that it was an argument Darwin himself had anticipated, and he stated that the example of a bacterial flagellum used by Behe had in fact been refuted by Kenneth R. Miller in '' Kitzmiller v. Dover Area School District''. Behe has responded to some of these criticisms. The
politically conservative Conservatism is a cultural, social, and political philosophy and ideology that seeks to promote and preserve traditional institutions, customs, and values. The central tenets of conservatism may vary in relation to the culture and civilizati ...
magazine ''
National Review ''National Review'' is an American conservative editorial magazine, focusing on news and commentary pieces on political, social, and cultural affairs. The magazine was founded by William F. Buckley Jr. in 1955. Its editor-in-chief is Rich L ...
'' voted ''Darwin's Black Box'' one of their top 100 non-fiction books of the century. The panel included
George Gilder George Franklin Gilder (; born November 29, 1939) is an American investor, author, economist, and co-founder of the Discovery Institute. His 1981 book, '' Wealth and Poverty'', advanced a case for supply-side economics and capitalism during the e ...
, a
Discovery Institute The Discovery Institute (DI) is a conservatism in the United States, politically conservative think tank that advocates the pseudoscience, pseudoscientific concept Article available froUniversiteit Gent of intelligent design (ID). It was fou ...
member.


Creation

In a review of Behe's paper 'Design vs. Randomness in Evolution: Where Do the Data Point?', Denis Lamoureux criticized ''Darwin's Black Box'' as having become central to fundamentalist and evangelical anti-evolution critiques against biological evolution. Behe supports the historically incorrect misrepresentation that Darwin's views on the origin of life were atheistic, when ''
On the Origin of Species ''On the Origin of Species'' (or, more completely, ''On the Origin of Species by Means of Natural Selection, or the Preservation of Favoured Races in the Struggle for Life'')The book's full original title was ''On the Origin of Species by M ...
'' repeatedly refers to a Creator in a positive and supportive context as impressing laws on matter. Though Behe has avoided committing himself to the view that God intervenes directly in nature to create purportedly irreducibly complex structures, ''Darwin's Black Box'' briefly speculates that divine intervention might have caused the direct creation of a cell from which all of life evolved, supporting creationist views of miraculous acts of creation, but ironically echoing Darwin's stated: "view of life, with its several powers, having been originally breathed into a few forms or into one." Behe's claim that the creation of an original first cell represents a "gap" in the laws of nature needing divine intervention appears to be the problematic
God of the gaps "God of the gaps" is a theological concept that emerged in the 19th century, and revolves around the idea that gaps in scientific understanding are regarded as indications of the existence of God. This perspective has its origins in the observa ...
position which is subject to the gaps being filled by scientific discoveries. Behe's thesis that irreducible structures are created in "one fell swoop" is opposed by other biochemists, including many who are devout Christians, and has no support from the fossil record.


Peer review controversy

In 2005, while testifying for the defense in the ''
Dover Dover ( ) is a town and major ferry port in Kent, southeast England. It faces France across the Strait of Dover, the narrowest part of the English Channel at from Cap Gris Nez in France. It lies southeast of Canterbury and east of Maidstone. ...
'' trial, Behe claimed under oath that the book had received a more thorough
peer review Peer review is the evaluation of work by one or more people with similar competencies as the producers of the work (:wiktionary:peer#Etymology 2, peers). It functions as a form of self-regulation by qualified members of a profession within the ...
than a scholarly article in a refereed journal, a claim which appears to conflict the facts of the book's peer review. Four of the book's five reviewers (Michael Atchison, Robert Shapiro, K. John Morrow, and
Russell Doolittle Russell F. Doolittle (January 10, 1931 – October 11, 2019) was an American biochemist who taught at the University of California, San Diego (UCSD). Described as a "world-renowned evolutionary biologist", Doolittle's research primarily focuse ...
) have made statements that contradict or otherwise do not support Behe's claim of the book passing a rigorous peer review.


Michael Atchison

Atchison has stated that he did not review the book at all, but spent 10 minutes on the phone receiving a brief overview of the book which he then endorsed without ever seeing the text.


Robert Shapiro

Robert Shapiro: Shapiro has said that he reviewed the book, and while he agreed with some of its analysis of origin-of-life research, he thought its conclusions are false, though the best explanation of the argument from design that was available. Had the book been submitted to a peer-reviewed journal and this comment had appeared, the review provided by Shapiro would have forced the conclusions regarding
intelligent design Intelligent design (ID) is a pseudoscientific argument for the existence of God, presented by its proponents as "an evidence-based scientific theory about life's origins".#Numbers 2006, Numbers 2006, p. 373; " Dcaptured headlines for it ...
to be changed or removed.


K. John Morrow

Morrow criticized the book as appalling and unsupported, which contributed to the original publisher turning down the book for publication.


Russell Doolittle

Russell Doolittle Russell F. Doolittle (January 10, 1931 – October 11, 2019) was an American biochemist who taught at the University of California, San Diego (UCSD). Described as a "world-renowned evolutionary biologist", Doolittle's research primarily focuse ...
, upon whom Behe based much of his discussion of blood clotting, described it as misrepresenting a simplified explanation he had given in a lecture, and presenting a fallacious creationist miscalculation of improbability by omitting known options, which also contributed to the original publisher turning down the book for publication. In the same trial, Behe eventually testified under oath that "There are no peer-reviewed articles by anyone advocating for intelligent design supported by pertinent experiments or calculations which provide detailed rigorous accounts of how intelligent design of any biological system occurred." Kitzmiller v. Dover Area School District/4:Whether ID Is Science, p88 The result of the trial was the ruling that intelligent design is not
science Science is a systematic discipline that builds and organises knowledge in the form of testable hypotheses and predictions about the universe. Modern science is typically divided into twoor threemajor branches: the natural sciences, which stu ...
and is essentially
religious Religion is a range of social- cultural systems, including designated behaviors and practices, morals, beliefs, worldviews, texts, sanctified places, prophecies, ethics, or organizations, that generally relate humanity to supernatural ...
in nature.


References


External links

*
Scanned copy (not all pages included) and reviews at Google books
* * * * {{cite web , url = https://www.pbs.org/wgbh/nova/video/judgment-day-intelligent-design-on-trial/ , title = Watch the documentary for free, click watch program , last = ''Intelligent Design On Trial'' NOVA Documentary, website =
PBS The Public Broadcasting Service (PBS) is an American public broadcaster and non-commercial, free-to-air television network based in Arlington, Virginia. PBS is a publicly funded nonprofit organization and the most prominent provider of educat ...
1996 non-fiction books American non-fiction books Biochemistry literature Books by Michael Behe English-language non-fiction books Free Press (publisher) books Intelligent design books