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Aeroplankton (or aerial plankton) are tiny lifeforms that float and drift in the air, carried by
wind Wind is the natural movement of air or other gases relative to a planet's surface. Winds occur on a range of scales, from thunderstorm flows lasting tens of minutes, to local breezes generated by heating of land surfaces and lasting a few ...
. Most of the living things that make up aeroplankton are very small to
microscopic The microscopic scale () is the scale of objects and events smaller than those that can easily be seen by the naked eye, requiring a lens or microscope to see them clearly. In physics, the microscopic scale is sometimes regarded as the scale be ...
in size, and many can be difficult to identify because of their tiny size. Scientists collect them for study in traps and sweep nets from
aircraft An aircraft is a vehicle that is able to flight, fly by gaining support from the Atmosphere of Earth, air. It counters the force of gravity by using either Buoyancy, static lift or by using the Lift (force), dynamic lift of an airfoil, or in ...
, kites or balloons. Aeroplankton is made up mostly of
microorganism A microorganism, or microbe,, ''mikros'', "small") and ''organism'' from the el, ὀργανισμός, ''organismós'', "organism"). It is usually written as a single word but is sometimes hyphenated (''micro-organism''), especially in old ...
s, including
virus A virus is a submicroscopic infectious agent that replicates only inside the living cells of an organism. Viruses infect all life forms, from animals and plants to microorganisms, including bacteria and archaea. Since Dmitri Ivanovsk ...
es, about 1,000 different species of
bacteria Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were am ...
, around 40,000 varieties of
fungi A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately fr ...
, and hundreds of species of
protist A protist () is any eukaryotic organism (that is, an organism whose cells contain a cell nucleus) that is not an animal, plant, or fungus. While it is likely that protists share a common ancestor (the last eukaryotic common ancestor), the e ...
s,
algae Algae (; singular alga ) is an informal term for a large and diverse group of photosynthetic eukaryotic organisms. It is a polyphyletic grouping that includes species from multiple distinct clades. Included organisms range from unicellular micr ...
,
moss Mosses are small, non-vascular flowerless plants in the taxonomic division Bryophyta (, ) '' sensu stricto''. Bryophyta ('' sensu lato'', Schimp. 1879) may also refer to the parent group bryophytes, which comprise liverworts, mosses, and ...
es, and
liverworts The Marchantiophyta () are a division of non-vascular land plants commonly referred to as hepatics or liverworts. Like mosses and hornworts, they have a gametophyte-dominant life cycle, in which cells of the plant carry only a single set of ...
that live some part of their life cycle as aeroplankton, often as
spore In biology, a spore is a unit of sexual or asexual reproduction that may be adapted for dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores form part of the life cycles of many plants, algae, ...
s,
pollen Pollen is a powdery substance produced by seed plants. It consists of pollen grains (highly reduced microgametophytes), which produce male gametes (sperm cells). Pollen grains have a hard coat made of sporopollenin that protects the gametop ...
, and wind-scattered
seed A seed is an embryonic plant enclosed in a protective outer covering, along with a food reserve. The formation of the seed is a part of the process of reproduction in seed plants, the spermatophytes, including the gymnosperm and angiosper ...
s. Additionally, microorganisms are swept into the air from terrestrial
dust storm A dust storm, also called a sandstorm, is a meteorological phenomenon common in arid and semi-arid regions. Dust storms arise when a gust front or other strong wind blows loose sand and dirt from a dry surface. Fine particles are transp ...
s, and an even larger amount of airborne marine microorganisms are propelled high into the atmosphere in
sea spray Sea spray are aerosol particles formed from the ocean, mostly by ejection into Earth's atmosphere by bursting bubbles at the air-sea interface. Sea spray contains both organic matter and inorganic salts that form sea salt aerosol (SSA). SSA ha ...
. Aeroplankton deposits hundreds of millions of airborne viruses and tens of millions of bacteria every day on every square meter around the planet. Small, drifting aeroplankton are found everywhere in the atmosphere, reaching concentration up to 106 microbial cells per cubic metre. Processes such as
aerosolisation Aerosolization is the process or act of converting some physical substance into the form of particles small and light enough to be carried on the air i.e. into an aerosol. Aerosolization refers to a process of intentionally oxidatively converting a ...
and wind transport determine how the microorganisms are distributed in the atmosphere. Air mass circulation globally disperses vast numbers of the floating aerial organisms, which travel across and between continents, creating biogeographic patterns by surviving and settling in remote environments. As well as the colonization of pristine environments, the globetrotting behaviour of these organisms has human health consequences. Airborne microorganisms are also involved in cloud formation and
precipitation In meteorology, precipitation is any product of the condensation of atmospheric water vapor that falls under gravitational pull from clouds. The main forms of precipitation include drizzle, rain, sleet, snow, ice pellets, graupel and hail. ...
, and play important roles in the formation of the
phyllosphere In microbiology, the phyllosphere is the total above-ground surface of a plant when viewed as a habitat for microorganisms. The phyllosphere can be further subdivided into the caulosphere (stems), phylloplane (leaves), anthosphere (flowers), an ...
, a vast terrestrial habitat involved in
nutrient cycling A nutrient cycle (or ecological recycling) is the movement and exchange of inorganic and organic matter back into the production of matter. Energy flow is a unidirectional and noncyclic pathway, whereas the movement of mineral nutrients is cycli ...
.


Overview

The atmosphere is the least understood biome on Earth despite its critical role as a microbial transport medium. Recent studies have shown microorganisms are ubiquitous in the atmosphere and reach concentration up to 106 microbial cells per cubic metre () and that they might be metabolically active. Different processes, such as
aerosolisation Aerosolization is the process or act of converting some physical substance into the form of particles small and light enough to be carried on the air i.e. into an aerosol. Aerosolization refers to a process of intentionally oxidatively converting a ...
, might be important in selecting which microorganisms exist in the atmosphere. Another process, microbial transport in the atmosphere, is critical for understanding the role microorganisms play in meteorology, atmospheric chemistry and public health. Changes in species geographic distributions can have strong ecological and socioeconomic consequences. In the case of microorganisms, air mass circulation disperses vast amounts of individuals and interconnects remote environments. Airborne microorganisms can travel between continents, survive and settle on remote environments, which creates biogeographic patterns. The circulation of atmospheric microorganisms results in global health concerns and ecological processes such as widespread dispersal of both pathogens and antibiotic resistances, cloud formation and precipitation, and colonization of pristine environments. Airborne microorganisms also play a role in the formation of the
phyllosphere In microbiology, the phyllosphere is the total above-ground surface of a plant when viewed as a habitat for microorganisms. The phyllosphere can be further subdivided into the caulosphere (stems), phylloplane (leaves), anthosphere (flowers), an ...
, which is one of the vastest habitats on the Earth's surface involved in
nutrient cycling A nutrient cycle (or ecological recycling) is the movement and exchange of inorganic and organic matter back into the production of matter. Energy flow is a unidirectional and noncyclic pathway, whereas the movement of mineral nutrients is cycli ...
. The field of bioaerosol research studies the taxonomy and community composition of airborne microbial organisms, also referred to as the air microbiome. A recent series of technological and analytical advancements include high-volumetric air samplers, an ultra-low biomass processing pipeline, low-input DNA sequencing libraries, as well as high-throughput sequencing technologies. Applied in unison, these methods have enabled comprehensive and meaningful characterization of the airborne microbial organismal dynamics found in the near-surface atmosphere. Previous studies investigating bioaerosols using amplicon sequencing predominantly focussed on the bacterial fraction of the air microbiome, while fungal and plant pollen fractions frequently remained understudied. Airborne microbial organisms also impact agricultural productivity, as bacterial and fungal species distributed by air movement act as plant blights. Furthermore, atmospheric processes, such as cloud condensation and ice nucleation events were shown to depend on airborne microbial particles. Therefore, understanding the dynamics of microbial organisms in air is crucial for insights into the atmosphere as an ecosystem, but also will inform on human wellbeing and respiratory health. In recent years, next generation DNA sequencing technologies, such as
metabarcoding Metabarcoding is the barcoding of DNA/ RNA (or eDNA/ eRNA) in a manner that allows for the simultaneous identification of many taxa within the same sample. The main difference between barcoding and metabarcoding is that metabarcoding does ...
as well as coordinated
metagenomics Metagenomics is the study of genetic material recovered directly from environmental or clinical samples by a method called sequencing. The broad field may also be referred to as environmental genomics, ecogenomics, community genomics or microb ...
and
metatranscriptomics Metatranscriptomics is the science that studies gene expression of microbes within natural environments, i.e., the metatranscriptome. It also allows to obtain whole gene expression profiling of complex microbial communities. While metagenomics foc ...
studies, have been providing new insights into microbial ecosystem functioning, and the relationships that microorganisms maintain with their environment. There have been studies in soils, the ocean, the human gut, and elsewhere. In the atmosphere, though, microbial gene expression and metabolic functioning remain largely unexplored, in part due to low biomass and sampling difficulties. So far, metagenomics has confirmed high fungal, bacterial, and viral biodiversity, and targeted
genomics Genomics is an interdisciplinary field of biology focusing on the structure, function, evolution, mapping, and editing of genomes. A genome is an organism's complete set of DNA, including all of its genes as well as its hierarchical, three-dim ...
and
transcriptomics Transcriptomics technologies are the techniques used to study an organism's transcriptome, the sum of all of its RNA transcripts. The information content of an organism is recorded in the DNA of its genome and expressed through transcription. H ...
towards ribosomal genes has supported earlier findings about the maintenance of metabolic activity in aerosols and in clouds. In atmospheric chambers airborne bacteria have been consistently demonstrated to react to the presence of a carbon substrate by regulating ribosomal gene expressions.


Types


Pollen grains

Effective pollen dispersal is vital for maintenance of genetic diversity and fundamental for connectivity between spatially separated populations. An efficient transfer of the pollen guarantees successful reproduction in flowering plants. No matter how pollen is dispersed, the male-female recognition is possible by mutual contact of stigma and pollen surfaces. Cytochemical reactions are responsible for pollen binding to a specific stigma. Allergic diseases are considered to be one of the most important contemporary public health problems affecting up to 15–35% of humans worldwide. There is a body of evidence suggesting that allergic reactions induced by pollen are on the increase, particularly in highly industrial countries.


Fungal spores

Fungi A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately fr ...
, a major element of atmospheric
bioaerosol Bioaerosols (short for biological aerosols) are a subcategory of particles released from terrestrial and marine ecosystems into the atmosphere. They consist of both living and non-living components, such as fungi, pollen, bacteria and viruses. Commo ...
s, are capable of existing and surviving in the air for extended periods of time. Both the spores and the mycelium may be dangerous for people suffering from allergies, causing various health issues including asthma. Apart from its negative impact on human health, atmospheric fungi may be dangerous for plants as sources of infection. Moreover, fungal organisms may be capable of creating additional toxins that are harmful to humans and animals, such as
endotoxin Lipopolysaccharides (LPS) are large molecules consisting of a lipid and a polysaccharide that are bacterial toxins. They are composed of an O-antigen, an outer core, and an inner core all joined by a covalent bond, and are found in the outer m ...
s or
mycotoxin A mycotoxin (from the Greek μύκης , "fungus" and τοξίνη , "toxin") is a toxic secondary metabolite produced by organisms of kingdom Fungi and is capable of causing disease and death in both humans and other animals. The term 'mycotoxin' ...
s. Modified text was copied from this source, which is available under
Creative Commons Attribution 4.0 International License
Considering this aspect, aeromycological research is considered capable of predicting future symptoms of plant diseases in both crops and wild plants. Fungi capable of travelling extensive distances with wind despite natural barriers, such as tall mountains, may be particularly relevant to understanding the role of fungi in plant disease. Notably, the presence of numerous fungal organisms pathogenic to plants has been determined in mountainous regions. A wealth of correlative evidence suggests
asthma Asthma is a long-term inflammatory disease of the airways of the lungs. It is characterized by variable and recurring symptoms, reversible airflow obstruction, and easily triggered bronchospasms. Symptoms include episodes of wheezing, co ...
is associated with
fungi A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately fr ...
and triggered by elevated numbers of fungal spores in the environment. Intriguing are reports of thunderstorm asthma. In a now classic study from the United Kingdom, an outbreak of acute asthma was linked to increases in '' Didymella exitialis'' ascospores and ''
Sporobolomyces ''Sporobolomyces'' is a fungal genus of uncertain familial placement in the order Sporidiobolales. Species in the genus are anamorphic yeasts. Teleomorphic forms are included in the genus '' Sporidiobolus''. Generic synonyms of ''Sporobolomy ...
'' basidiospores associated with a severe weather event. Thunderstorms are associated with spore plumes: when spore concentrations increase dramatically over a short period of time, for example from 20,000 spores/m3 to over 170,000 spores/m3 in 2 hours. However, other sources consider pollen or pollution as causes of thunderstorm asthma. Transoceanic and transcontinental dust events move large numbers of spores across vast distances and have the potential to impact public health, and similar correlative evidence links dust blown off the Sahara with pediatric emergency room admissions on the island of Trinidad.


Pteridophyte spores

Pteridophyte A pteridophyte is a vascular plant (with xylem and phloem) that disperses spores. Because pteridophytes produce neither flowers nor seeds, they are sometimes referred to as " cryptogams", meaning that their means of reproduction is hidden. Fer ...
spores, such as fern spores, similar to pollen grains and fungal spores, are also components of aeroplankton. Fungal spores usually rank first among bioaerosol constituents due to their count numbers which can reach to between , while pollen grains and fern spores can each reach to between .


Arthropods

Many small animals, mainly
arthropod Arthropods (, (gen. ποδός)) are invertebrate animals with an exoskeleton, a segmented body, and paired jointed appendages. Arthropods form the phylum Arthropoda. They are distinguished by their jointed limbs and cuticle made of chiti ...
s (such as
insect Insects (from Latin ') are pancrustacean hexapod invertebrates of the class Insecta. They are the largest group within the arthropod phylum. Insects have a chitinous exoskeleton, a three-part body ( head, thorax and abdomen), three pa ...
s and
spider Spiders (order Araneae) are air-breathing arthropods that have eight legs, chelicerae with fangs generally able to inject venom, and spinnerets that extrude silk. They are the largest order of arachnids and rank seventh in total species ...
s), are also carried upwards into the atmosphere by air currents and may be found floating several thousand feet up.
Aphid Aphids are small sap-sucking insects and members of the superfamily Aphidoidea. Common names include greenfly and blackfly, although individuals within a species can vary widely in color. The group includes the fluffy white woolly aphids. A t ...
s, for example, are frequently found at high altitudes.
Ballooning Ballooning may refer to: * Hot air ballooning * Balloon (aeronautics) * Ballooning (spider) * Ballooning degeneration, a disease * Memory ballooning See also * Balloon (disambiguation) A balloon is a flexible container for (partially or fully) co ...
, sometimes called kiting, is a process by which
spider Spiders (order Araneae) are air-breathing arthropods that have eight legs, chelicerae with fangs generally able to inject venom, and spinnerets that extrude silk. They are the largest order of arachnids and rank seventh in total species ...
s, and some other small
invertebrate Invertebrates are a paraphyletic group of animals that neither possess nor develop a vertebral column (commonly known as a ''backbone'' or ''spine''), derived from the notochord. This is a grouping including all animals apart from the chorda ...
s, move through the air by releasing one or more gossamer threads to catch the wind, causing them to become airborne at the mercy of
air current In meteorology, air currents are concentrated areas of winds. They are mainly due to differences in atmospheric pressure or temperature. They are divided into horizontal and vertical currents; both are present at mesoscale while horizontal ones ...
s. A spider (usually limited to individuals of a small species), or spiderling after hatching, will climb as high as it can, stand on raised legs with its abdomen pointed upwards ("tiptoeing"), and then release several silk threads from its spinnerets into the air. These automatically form a triangular shaped parachute which carries the spider away on updrafts of winds where even the slightest of breezes will disperse the arachnid. The flexibility of their silk draglines can aid the aerodynamics of their flight, causing the spiders to drift an unpredictable and sometimes long distance. Even atmospheric samples collected from balloons at altitude and ships mid-ocean have reported spider landings. Mortality is high. Enough lift for ballooning may occur, even in windless conditions, if an electrostatic charge gradient is present in the atmosphere.


Nematodes

Nematode The nematodes ( or grc-gre, Νηματώδη; la, Nematoda) or roundworms constitute the phylum Nematoda (also called Nemathelminthes), with plant- parasitic nematodes also known as eelworms. They are a diverse animal phylum inhabiting a bro ...
s (roundworms), the most common animal taxon, are also found among aeroplankton. Nematodes are an essential trophic link between
unicellular organism A unicellular organism, also known as a single-celled organism, is an organism that consists of a single cell, unlike a multicellular organism that consists of multiple cells. Organisms fall into two general categories: prokaryotic organisms a ...
s like bacteria, and larger organisms such as
tardigrade Tardigrades (), known colloquially as water bears or moss piglets, are a phylum of eight-legged segmented micro-animals. They were first described by the German zoologist Johann August Ephraim Goeze in 1773, who called them Kleiner Wasserb� ...
s,
copepod Copepods (; meaning "oar-feet") are a group of small crustaceans found in nearly every freshwater and saltwater habitat. Some species are planktonic (inhabiting sea waters), some are benthic (living on the ocean floor), a number of species have ...
s,
flatworm The flatworms, flat worms, Platyhelminthes, or platyhelminths (from the Greek πλατύ, ''platy'', meaning "flat" and ἕλμινς (root: ἑλμινθ-), ''helminth-'', meaning "worm") are a phylum of relatively simple bilaterian, unsegmen ...
s, and
fish Fish are Aquatic animal, aquatic, craniate, gill-bearing animals that lack Limb (anatomy), limbs with Digit (anatomy), digits. Included in this definition are the living hagfish, lampreys, and Chondrichthyes, cartilaginous and bony fish as we ...
es. For nematodes,
anhydrobiosis Cryptobiosis or anabiosis is a metabolic state of life entered by an organism in response to adverse environmental conditions such as desiccation, freezing, and oxygen deficiency. In the cryptobiotic state, all measurable metabolic processes sto ...
is a widespread strategy allowing them to survive unfavorable conditions for months and even years. Accordingly, nematodes can be readily dispersed by wind. However, as reported by Vanschoenwinkel et al., nematodes account for only about one percent of wind-drifted animals. Among the habitats colonized by nematodes are those that are strongly exposed to wind erosion as e.g., the shorelines of permanent waters, soils, mosses, dead wood, and tree bark. In addition, within a few days of forming temporary waters such as phytotelmata were shown to be colonized by numerous nematode species.


Unicellular microorganisms

A stream of unicellular airborne microorganisms circles the planet above weather systems but below commercial air lanes. Some microorganisms are swept up from terrestrial dust storms, but most originate from
marine microorganisms Marine microorganisms are defined by their habitat as microorganisms living in a marine environment, that is, in the saltwater of a sea or ocean or the brackish water of a coastal estuary. A microorganism (or microbe) is any microscopic livin ...
in
sea spray Sea spray are aerosol particles formed from the ocean, mostly by ejection into Earth's atmosphere by bursting bubbles at the air-sea interface. Sea spray contains both organic matter and inorganic salts that form sea salt aerosol (SSA). SSA ha ...
. In 2018, scientists reported that hundreds of millions of viruses and tens of millions of bacteria are deposited daily on every square meter around the planet. The presence of airborne
cyanobacteria Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, bl ...
and
microalgae Microalgae or microphytes are microscopic algae invisible to the naked eye. They are phytoplankton typically found in freshwater and marine systems, living in both the water column and sediment. They are unicellular species which exist indiv ...
as well as their negative impacts on human health have been documented by many researchers worldwide. However, studies on cyanobacteria and microalgae are few compared with those on other
bacteria Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were am ...
and
virus A virus is a submicroscopic infectious agent that replicates only inside the living cells of an organism. Viruses infect all life forms, from animals and plants to microorganisms, including bacteria and archaea. Since Dmitri Ivanovsk ...
es. Research is especially lacking on the presence and taxonomic composition of cyanobacteria and microalgae near economically important water bodies with much tourism. Modified text was copied from this source, which is available under
Creative Commons Attribution 4.0 International License
Research on airborne algae is especially important in tourist areas near water-bodies. Sunbathers are exposed to particularly high quantities of harmful cyanobacteria and microalgae. Additionally, harmful microalgae and cyanobacteria blooms tend to occur in both marine and freshwater reservoirs during summer. Previous work has shown that the Mediterranean Sea is dominated by the picocyanobacteria ''
Synechococcus ''Synechococcus'' (from the Greek ''synechos'', in succession, and the Greek ''kokkos'', granule) is a unicellular cyanobacterium that is very widespread in the marine environment. Its size varies from 0.8 to 1.5 µm. The photosynthetic c ...
'' sp. and '' Synechocystis'' sp., which are responsible for the production of a group of hepatotoxins known as
microcystin Microcystins—or cyanoginosins—are a class of toxins produced by certain freshwater cyanobacteria, commonly known as blue-green algae. Over 250 different microcystins have been discovered so far, of which microcystin-LR is the most common. C ...
s. Because most tourism occurs in summer, many tourists are exposed to the most extreme negative impacts of airborne microalgae. Airborne bacteria are emitted by most Earth surfaces (plants, oceans, land, and urban areas) to the atmosphere via a variety of mechanical processes such as aeolian
soil erosion Soil erosion is the denudation or wearing away of the upper layer of soil. It is a form of soil degradation. This natural process is caused by the dynamic activity of erosive agents, that is, water, ice (glaciers), snow, air (wind), plants, a ...
,
sea spray Sea spray are aerosol particles formed from the ocean, mostly by ejection into Earth's atmosphere by bursting bubbles at the air-sea interface. Sea spray contains both organic matter and inorganic salts that form sea salt aerosol (SSA). SSA ha ...
production, or mechanical disturbances including anthropogenic activities. Due to their relatively small size (the median
aerodynamic diameter An aerosol is a suspension of fine solid particles or liquid droplets in air or another gas. Aerosols can be natural or anthropogenic. Examples of natural aerosols are fog or mist, dust, forest exudates, and geyser steam. Examples of anthropo ...
of bacteria-containing particles is around 2–4 μm), these can then be transported upward by turbulent fluxes and carried by wind to long distances. As a consequence, bacteria are present in the air up to at least the lower
stratosphere The stratosphere () is the second layer of the atmosphere of the Earth, located above the troposphere and below the mesosphere. The stratosphere is an atmospheric layer composed of stratified temperature layers, with the warm layers of air h ...
. Given that the atmosphere is a large conveyor belt that moves air over thousands of kilometers, microorganisms are disseminated globally. Airborne transport of microbes is therefore likely pervasive at the global scale, yet there have been only a limited number of studies that have looked at the spatial distribution of microbes across different geographical regions. One of the main difficulties is linked with the low microbial biomass associated with a high diversity existing in the atmosphere outdoor (~102–105 cells/m3) thus requiring reliable sampling procedures and controls. Furthermore, the site location and its environmental specificities have to be accounted for to some extent by considering chemical and meteorological variables. The environmental role of airborne cyanobacteria and microalgae is only partly understood. While present in the air, cyanobacteria and microalgae can contribute to ice nucleation and cloud droplet formation. Cyanobacteria and microalgae can also impact human health. Depending on their size, airborne cyanobacteria and microalgae can be inhaled by humans and settle in different parts of the respiratory system, leading to the formation or intensification of numerous diseases and ailments, e.g., allergies, dermatitis, and rhinitis. According to Wiśniewska et al., these harmful microorganisms can constitute between 13% and 71% of sampled taxa. However, the interplay between microbes and atmospheric physical and chemical conditions is an open field of research that can only be fully addressed using multidisciplinary approaches. Modified text was copied from this source, which is available under
Creative Commons Attribution 4.0 International License
Airborne microalgae and cyanobacteria are the most poorly studied organisms in
aerobiology Aerobiology (from Greek ἀήρ, ''aēr'', "air"; βίος, ''bios'', "life"; and -λογία, ''-logia'') is a branch of biology that studies organic particles, such as bacteria, fungal spores, very small insects, pollen grains and viruses, ...
and
phycology Phycology () is the scientific study of algae. Also known as algology, phycology is a branch of life science. Algae are important as primary producers in aquatic ecosystems. Most algae are eukaryotic, photosynthetic organisms that live in a ...
. This lack of knowledge may result from the lack of standard methods for both sampling and further analysis, especially quantitative analytical methods. Few studies have been performed to determine the number of cyanobacteria and microalgae in the atmosphere However, it was shown in 2012 that the average quantity of atmospheric algae is between 100 and 1000 cells per cubic meter of air. As of 2019, about 350 taxa of cyanobacteria and microalgae have been documented in the atmosphere worldwide. Cyanobacteria and microalgae end up in the air as a consequence of their emission from soil, buildings, trees, and roofs. Biological particles are known to represent a significant fraction (~20–70%) of the total number of
aerosol An aerosol is a suspension of fine solid particles or liquid droplets in air or another gas. Aerosols can be natural or anthropogenic. Examples of natural aerosols are fog or mist, dust, forest exudates, and geyser steam. Examples of anthropogen ...
s > 0.2 μm, with large spatial and temporal variations. Among these, microorganisms are of particular interest in fields as diverse as epidemiology, including
phytopathology Plant pathology (also phytopathology) is the scientific study of diseases in plants caused by pathogens (infectious organisms) and environmental conditions (physiological factors). Organisms that cause infectious disease include fungi, oomy ...
, bioterrorism, forensic science, and public health, and environmental sciences, like
microbial ecology Microbial ecology (or environmental microbiology) is the ecology of microorganisms: their relationship with one another and with their environment. It concerns the three major domains of life—Eukaryota, Archaea, and Bacteria—as well as viru ...
, meteorology and climatology. More precisely concerning the latter, airborne microorganisms contribute to the pool of particles nucleating the condensation and crystallization of water and they are thus potentially involved in cloud formation and in the triggering of precipitation. Additionally, viable microbial cells act as chemical catalyzers interfering with atmospheric chemistry. The constant flux of bacteria from the atmosphere to the Earth's surface due to precipitation and dry deposition can also affect global biodiversity, but they are rarely taken into account when conducting ecological surveys. As stressed by these studies attempting to decipher and understand the spread of microbes over the planet, concerted data are needed for documenting the abundance and distribution of airborne microorganisms, including at remote and altitudes sites.


Bioaerosols

Bioaerosol Bioaerosols (short for biological aerosols) are a subcategory of particles released from terrestrial and marine ecosystems into the atmosphere. They consist of both living and non-living components, such as fungi, pollen, bacteria and viruses. Commo ...
s, known also as primary biological
aerosol An aerosol is a suspension of fine solid particles or liquid droplets in air or another gas. Aerosols can be natural or anthropogenic. Examples of natural aerosols are fog or mist, dust, forest exudates, and geyser steam. Examples of anthropogen ...
s, are the subset of atmospheric particles that are directly released from the
biosphere The biosphere (from Greek βίος ''bíos'' "life" and σφαῖρα ''sphaira'' "sphere"), also known as the ecosphere (from Greek οἶκος ''oîkos'' "environment" and σφαῖρα), is the worldwide sum of all ecosystems. It can also ...
into the atmosphere. They include living and dead organisms (e.g.,
algae Algae (; singular alga ) is an informal term for a large and diverse group of photosynthetic eukaryotic organisms. It is a polyphyletic grouping that includes species from multiple distinct clades. Included organisms range from unicellular micr ...
,
archaea Archaea ( ; singular archaeon ) is a domain of single-celled organisms. These microorganisms lack cell nuclei and are therefore prokaryotes. Archaea were initially classified as bacteria, receiving the name archaebacteria (in the Archaeba ...
,
bacteria Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were am ...
), dispersal units (e.g., fungal spores and plant
pollen Pollen is a powdery substance produced by seed plants. It consists of pollen grains (highly reduced microgametophytes), which produce male gametes (sperm cells). Pollen grains have a hard coat made of sporopollenin that protects the gametop ...
), and various fragments or excretions (e.g., plant debris and
brochosome Brochosomes are intricately structured microscopic granules secreted by leafhoppers (the family Cicadellidae of the insect order Hemiptera) and typically found on their body surface and, more rarely, eggs. Brochosomes were first described in 19 ...
s). Bioaerosol particle diameters range from
nanometer 330px, Different lengths as in respect to the molecular scale. The nanometre (international spelling as used by the International Bureau of Weights and Measures; SI symbol: nm) or nanometer (American and British English spelling differences#-re, ...
s up to about a tenth of a millimeter. The upper limit of the aerosol particle size range is determined by rapid sedimentation, i.e., larger particles are too heavy to remain airborne for extended periods of time. Modified text was copied from this source, which is available under
Creative Commons Attribution 4.0 International License
Bioaerosols include living and dead organisms as well as their fragments and excrements emitted from the biosphere into the atmosphere. Included are archaea, fungi, microalgae, cyanobacteria, bacteria, viruses, plant cell debris, and pollen. Historically, the first investigations of the occurrence and dispersion of microorganisms and spores in the air can be traced back to the early 19th century. Since then, the study of bioaerosols has come a long way, and air samples collected with aircraft, balloons, and rockets have shown that bioaerosols released from land and ocean surfaces can be transported over long distances and up to very high altitudes, i.e., between continents and beyond the
troposphere The troposphere is the first and lowest layer of the atmosphere of the Earth, and contains 75% of the total mass of the planetary atmosphere, 99% of the total mass of water vapour and aerosols, and is where most weather phenomena occur. Fro ...
. File:Bioaerosol cycling in the Earth system.jpg, After emission from the biosphere, bioaerosol particles interact with other aerosol particles and trace gases in the atmosphere and can be involved in the formation of clouds and precipitation. After dry or wet deposition to the Earth's surface, viable bioparticles can contribute to biological reproduction and further emission. This feedback can be particularly efficient when coupled to the water cycle (bioprecipitation). File:Ecosystem interactions of biogenic aerosol particles in the Earth system.jpg, Key aspects and areas of research required to determine and quantify the interactions and effects of biogenic aerosol particles in the Earth system, including primary biological aerosols directly emitted to the atmosphere and secondary organic aerosols formed upon oxidation and gas-to-particle conversion of volatile organic compounds. Bioaerosols play a key role in the dispersal of reproductive units from plants and microbes (pollen, spores, etc.), for which the atmosphere enables transport over geographic barriers and long distances. Bioaerosols are thus highly relevant for the spread of organisms, allowing genetic exchange between habitats and geographic shifts of biomes. They are central elements in the development, evolution, and dynamics of ecosystems.


Transport and distribution

File:Factors controlling microbial communities of the planetary boundary layer.webp, Once aerosolized, microbial cells enter the
planetary boundary layer In meteorology, the planetary boundary layer (PBL), also known as the atmospheric boundary layer (ABL) or peplosphere, is the lowest part of the atmosphere and its behaviour is directly influenced by its contact with a planetary surface. On Ear ...
, defined as the air layer near the ground directly influenced by the planetary surface. The concentration and taxonomic diversity of airborne microbial communities in the planetary boundary layer has been recently described, though the functional potential of airborne microbial communities remains unknown. From the planetary boundary layer, the microbial community might eventually be transported upwards by air currents into the free
troposphere The troposphere is the first and lowest layer of the atmosphere of the Earth, and contains 75% of the total mass of the planetary atmosphere, 99% of the total mass of water vapour and aerosols, and is where most weather phenomena occur. Fro ...
(air layer above the planetary boundary layer) or even higher into the
stratosphere The stratosphere () is the second layer of the atmosphere of the Earth, located above the troposphere and below the mesosphere. The stratosphere is an atmospheric layer composed of stratified temperature layers, with the warm layers of air h ...
. Microorganisms might undergo a selection process during their way up into the troposphere and the stratosphere. Subject to gravity,
aerosol An aerosol is a suspension of fine solid particles or liquid droplets in air or another gas. Aerosols can be natural or anthropogenic. Examples of natural aerosols are fog or mist, dust, forest exudates, and geyser steam. Examples of anthropogen ...
s (or
particulate matter Particulates – also known as atmospheric aerosol particles, atmospheric particulate matter, particulate matter (PM) or suspended particulate matter (SPM) – are microscopic particles of solid or liquid matter suspended in the air. The te ...
) as well as
bioaerosol Bioaerosols (short for biological aerosols) are a subcategory of particles released from terrestrial and marine ecosystems into the atmosphere. They consist of both living and non-living components, such as fungi, pollen, bacteria and viruses. Commo ...
s become concentrated in the lower part of the
troposphere The troposphere is the first and lowest layer of the atmosphere of the Earth, and contains 75% of the total mass of the planetary atmosphere, 99% of the total mass of water vapour and aerosols, and is where most weather phenomena occur. Fro ...
that is called the
planetary boundary layer In meteorology, the planetary boundary layer (PBL), also known as the atmospheric boundary layer (ABL) or peplosphere, is the lowest part of the atmosphere and its behaviour is directly influenced by its contact with a planetary surface. On Ear ...
. Microbial concentrations thus usually show a vertical stratification from the bottom to the top of the troposphere with average estimated bacterial concentrations of 900 to 2 × 107 cells per cubic metre in the planetary boundary layer and 40 to 8 × 104 cells per cubic metre in the highest part of the troposphere called the free troposphere. The troposphere is the most dynamic layer in terms of chemistry and physics of aerosols and harbors complex chemical reactions and meteorological phenomena that lead to the coexistence of a gas phase, liquid phases (i.e., cloud, rain, and fog water) and solid phases (i.e., microscopic particulate matter, sand dust). The various atmospheric phases represent multiple biological niches. Possible processes in the way atmospheric
microbial communities Microbial population biology is the application of the principles of population biology to microorganisms. Distinguishing from other biological disciplines Microbial population biology, in practice, is the application of population ecology and popu ...
can distribute themselves have recently been investigated in meteorology, seasons, surface conditions and global air circulation. Modified text was copied from this source, which is available under
Creative Commons Attribution 4.0 International License


Over space and time

Microorganisms attached to aerosols can travel intercontinental distances, survive, and further colonize remote environments. Airborne microbes are influenced by environmental and climatic patterns that are predicted to change in the near future, with unknown consequences. Modified text was copied from this source, which is available under
Creative Commons Attribution 4.0 International License
Airborne microbial communities play significant roles in public health and meteorological processes, so it is important to understand how these communities are distributed over time and space. File:Atmosphere layers, temperature and airborne emission sources.png, Most studies have focused on laboratory cultivation to identify possible metabolic functions of microbial strains of atmospheric origin, mainly from cloud water. Given that cultivable organisms represent about 1 % of the entire microbial community, culture-independent techniques and especially metagenomic studies applied to atmospheric microbiology have the potential to provide additional information on the selection and genetic adaptation of airborne microorganisms. There are some metagenomic studies on airborne microbial communities over specific sites. Metagenomic investigations of complex microbial communities in many ecosystems (for example, soil, seawater, lakes, feces and sludge) have provided evidence that microorganism functional signatures reflect the abiotic conditions of their environment, with different relative abundances of specific microbial functional classes. This observed correlation of microbial-community functional potential and the physical and chemical characteristics of their environments could have resulted from genetic modifications (microbial adaptation) and/or physical selection. The latter refers to the death of sensitive cells and the survival of resistant or previously adapted cells. This physical selection can occur when microorganisms are exposed to physiologically adverse conditions. Modified text was copied from this source, which is available under
Creative Commons Attribution 4.0 International License
The presence of a specific microbial functional signature in the atmosphere has not been investigated yet. Microbial strains of airborne origin have been shown to survive and develop under conditions typically found in cloud water (i.e., high concentrations of H2O2, typical cloud carbonaceous sources, ultraviolet – UV – radiation etc. While atmospheric chemicals might lead to some microbial adaptation, physical and unfavorable conditions of the atmosphere such as UV radiation, low water content and cold temperatures might select which microorganisms can survive in the atmosphere. From the pool of microbial cells being aerosolized from Earth's surfaces, these adverse conditions might act as a filter in selecting cells already resistant to unfavorable physical conditions. Fungal cells and especially fungal spores might be particularly adapted to survive in the atmosphere due to their innate resistance and might behave differently than bacterial cells. Still, the proportion and nature (i.e., fungi versus bacteria) of microbial cells that are resistant to the harsh atmospheric conditions within airborne microbial communities are unknown. Airborne microbial transport is central to dispersal outcomes and several studies have demonstrated diverse microbial biosignatures are recoverable from the atmosphere. Microbial transport has been shown to occur across inter-continental distances above terrestrial habitats. Variation has been recorded seasonally, with underlying land use, and due to stochastic weather events such as dust storms. There is evidence specific bacterial taxa (e.g.,
Actinomycetota The ''Actinomycetota'' (or ''Actinobacteria'') are a phylum of all gram-positive bacteria. They can be terrestrial or aquatic. They are of great economic importance to humans because agriculture and forests depend on their contributions to s ...
and some
Gammaproteobacteria Gammaproteobacteria is a class of bacteria in the phylum Pseudomonadota (synonym Proteobacteria). It contains about 250 genera, which makes it the most genera-rich taxon of the Prokaryotes. Several medically, ecologically, and scientifically imp ...
) are preferentially aerosolized from oceans.


Over urban areas

As a result of rapid industrialization and urbanization, global megacities have been impacted by extensive and intense
particulate matter Particulates – also known as atmospheric aerosol particles, atmospheric particulate matter, particulate matter (PM) or suspended particulate matter (SPM) – are microscopic particles of solid or liquid matter suspended in the air. The te ...
pollution events, which have potential human health consequences. Severe particulate matter pollution is associated with
chronic obstructive pulmonary disease Chronic obstructive pulmonary disease (COPD) is a type of progressive lung disease characterized by long-term respiratory symptoms and airflow limitation. The main symptoms include shortness of breath and a cough, which may or may not produce ...
and
asthma Asthma is a long-term inflammatory disease of the airways of the lungs. It is characterized by variable and recurring symptoms, reversible airflow obstruction, and easily triggered bronchospasms. Symptoms include episodes of wheezing, co ...
, as well as risks for early death. While the chemical components of particulate matter pollution and their impacts on human health have been widely studied, the potential impact of pollutant-associated microbes remains unclear. Airborne microbial exposure, including exposure to dust-associated organisms, has been established to both protect against and exacerbate certain diseases. Understanding the temporal dynamics of the taxonomic and functional diversity of microorganisms in urban air, especially during smog events, will improve understanding of the potential microbe-associated health consequences. Recent advances in airborne particle
DNA extraction The first isolation of deoxyribonucleic acid (DNA) was done in 1869 by Friedrich Miescher. Currently, it is a routine procedure in molecular biology or forensic analyses. For the chemical method, many different kits are used for extraction, and s ...
and metagenomic library preparation have enabled low biomass environments to be subject to
shotgun sequencing In genetics, shotgun sequencing is a method used for sequencing random DNA strands. It is named by analogy with the rapidly expanding, quasi-random shot grouping of a shotgun. The chain-termination method of DNA sequencing ("Sanger sequencing ...
analysis. In 2020, Qin ''et al.'' used shotgun sequencing analysis to reveal a great diversity of microbial species and
antibiotic resistant Antimicrobial resistance (AMR) occurs when microbes evolve mechanisms that protect them from the effects of antimicrobials. All classes of microbes can evolve resistance. Fungi evolve antifungal resistance. Viruses evolve antiviral resistance. P ...
genes in Beijing's particulate matter, largely consistent with a recent study. The data suggest that potential pathogen and antibiotic resistance burden increases with increasing pollution levels and that severe smog events promote the exposure. In addition, the particulate matter also contained several bacteria that harbored antibiotic resistant genes flanked by mobile genetic elements, which could be associated with
horizontal gene transfer Horizontal gene transfer (HGT) or lateral gene transfer (LGT) is the movement of genetic material between unicellular and/or multicellular organisms other than by the ("vertical") transmission of DNA from parent to offspring (reproduction). H ...
. Many of these bacteria were typical or putative members of the
human microbiome The human microbiome is the aggregate of all microbiota that reside on or within human tissues and biofluids along with the corresponding anatomical sites in which they reside, including the skin, mammary glands, seminal fluid, uterus, ovarian ...
.


Dispersal

Dispersal is a vital component of an organism's life-history, and the potential for dispersal determines the distribution, abundance, and thus, the community dynamics of species at different sites. A new habitat must first be reached before filters such as organismal abilities and adaptations, the quality of a habitat, and the established biological community determine the
colonization Colonization, or colonisation, constitutes large-scale population movements wherein migrants maintain strong links with their, or their ancestors', former country – by such links, gain advantage over other inhabitants of the territory. When ...
efficiency of a species. While larger animals can cover distances on their own and actively seek suitable habitats, small (<2 mm) organisms are often passively dispersed, resulting in their more ubiquitous occurrence. While active dispersal accounts for rather predictable distribution patterns, passive dispersal leads to a more randomized immigration of organisms. Mechanisms for passive dispersal are the transport on (
epizoochory In Spermatophyte plants, seed dispersal is the movement, spread or transport of seeds away from the parent plant. Plants have limited mobility and rely upon a variety of dispersal vectors to transport their seeds, including both abiotic vector ...
) or in ( endozoochory) larger animals (e.g., flying insects, birds, or mammals) and the erosion by wind. Modified text was copied from this source, which is available under
Creative Commons Attribution 4.0 International License
A propagule is any material that functions in propagating an organism to the next stage in its life cycle, such as by dispersal. The propagule is usually distinct in form from the parent organism. Propagules are produced by
plants Plants are predominantly photosynthetic eukaryotes of the kingdom Plantae. Historically, the plant kingdom encompassed all living things that were not animals, and included algae and fungi; however, all current definitions of Plantae exclude ...
(in the form of
seeds A seed is an embryonic plant enclosed in a protective outer covering, along with a food reserve. The formation of the seed is a part of the process of reproduction in seed plants, the spermatophytes, including the gymnosperm and angiosperm ...
or
spores In biology, a spore is a unit of sexual or asexual reproduction that may be adapted for dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores form part of the life cycles of many plants, algae, ...
),
fungi A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately fr ...
(in the form of
spores In biology, a spore is a unit of sexual or asexual reproduction that may be adapted for dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores form part of the life cycles of many plants, algae, ...
), and
bacteria Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were am ...
(for example
endospore An endospore is a dormant, tough, and non-reproductive structure produced by some bacteria in the phylum Bacillota. The name "endospore" is suggestive of a spore or seed-like form (''endo'' means 'within'), but it is not a true spore (i.e., n ...
s or
microbial cyst A microbial cyst is a resting or dormant stage of a microorganism, usually a bacterium or a protist or rarely an invertebrate animal, that helps the organism to survive in unfavorable environmental conditions. It can be thought of as a state of ...
s).T.Y. Chuang and W.H. Ko. 1981. Propagule size: Its relation to population density of microorganisms in soil. Soil Biology and Biochemistry. 13(3). Often cited as an important requirement for effective wind dispersal is the presence of propagules (e.g., resting eggs, cysts, ephippia, juvenile and adult resting stages), which also enables organisms to survive unfavorable environmental conditions until they enter a suitable habitat. These dispersal units can be blown from surfaces such as soil, moss, and the desiccated sediments of temporary or intermittent waters. The passively dispersed organisms are typically pioneer colonizers. However, wind-drifted species vary in their vagility (probability to be transported with the wind), with the weight and form of the propagules, and therefore, the wind speed required for their transport, determining the dispersal distance. For example, in nematodes, resting eggs are less effectively transported by wind than other life stages,Carroll, J.J. and Viglierchio, D.R. (1981). "On the transport of nematodes by the wind". ''Journal of Nematology'', 13(4): 476. while organisms in
anhydrobiosis Cryptobiosis or anabiosis is a metabolic state of life entered by an organism in response to adverse environmental conditions such as desiccation, freezing, and oxygen deficiency. In the cryptobiotic state, all measurable metabolic processes sto ...
are lighter and thus more readily transported than hydrated forms. Because different organisms are, for the most part, not dispersed over the same distances, source habitats are also important, with the number of organisms contained in air declining with increasing distance from the source system. The distances covered by small animals range from a few meters, to hundreds, to thousands of meters. While the wind dispersal of aquatic organisms is possible even during the wet phase of a transiently aquatic habitat, during the dry stages a larger number of dormant propagules are exposed to wind and thus dispersed. Freshwater organisms that must "cross the dry ocean" to enter new aquatic island systems will be passively dispersed more successfully than terrestrial taxa. Numerous taxa from both soil and freshwater systems have been captured from the air (e.g., bacteria, several
algae Algae (; singular alga ) is an informal term for a large and diverse group of photosynthetic eukaryotic organisms. It is a polyphyletic grouping that includes species from multiple distinct clades. Included organisms range from unicellular micr ...
,
ciliate The ciliates are a group of alveolates characterized by the presence of hair-like organelles called cilia, which are identical in structure to eukaryotic flagella, but are in general shorter and present in much larger numbers, with a differen ...
s,
flagellate A flagellate is a cell or organism with one or more whip-like appendages called flagella. The word ''flagellate'' also describes a particular construction (or level of organization) characteristic of many prokaryotes and eukaryotes and thei ...
s,
rotifer The rotifers (, from the Latin , "wheel", and , "bearing"), commonly called wheel animals or wheel animalcules, make up a phylum (Rotifera ) of microscopic and near-microscopic pseudocoelomate animals. They were first described by Rev. John H ...
s,
crustacean Crustaceans (Crustacea, ) form a large, diverse arthropod taxon which includes such animals as decapoda, decapods, ostracoda, seed shrimp, branchiopoda, branchiopods, argulidae, fish lice, krill, remipedes, isopoda, isopods, barnacles, copepods, ...
s,
mite Mites are small arachnids (eight-legged arthropods). Mites span two large orders of arachnids, the Acariformes and the Parasitiformes, which were historically grouped together in the subclass Acari, but genetic analysis does not show clear e ...
s, and
tardigrade Tardigrades (), known colloquially as water bears or moss piglets, are a phylum of eight-legged segmented micro-animals. They were first described by the German zoologist Johann August Ephraim Goeze in 1773, who called them Kleiner Wasserb� ...
s). While these have been qualitatively well studied, accurate estimates of their dispersal rates are lacking.


Clouds

The outdoor atmosphere harbors diverse microbial assemblages composed of bacteria, fungi and viruses whose functioning remains largely unexplored. While the occasional presence of human pathogens or opportunists can cause potential hazard, in general the vast majority of airborne microbes originate from natural environments like soil or plants, with large spatial and temporal variations of
biomass Biomass is plant-based material used as a fuel for heat or electricity production. It can be in the form of wood, wood residues, energy crops, agricultural residues, and waste from industry, farms, and households. Some people use the terms bio ...
and
biodiversity Biodiversity or biological diversity is the variety and variability of life on Earth. Biodiversity is a measure of variation at the genetic ('' genetic variability''), species ('' species diversity''), and ecosystem ('' ecosystem diversity'') ...
. Once ripped off and
aerosolized Aerosolization is the process or act of converting some physical substance into the form of particles small and light enough to be carried on the air i.e. into an aerosol. Aerosolization refers to a process of intentionally oxidatively converting a ...
from surfaces by mechanical disturbances such as those generated by wind, raindrop impacts or water bubbling, microbial cells are transported upward by
turbulent In fluid dynamics, turbulence or turbulent flow is fluid motion characterized by chaotic changes in pressure and flow velocity. It is in contrast to a laminar flow, which occurs when a fluid flows in parallel layers, with no disruption between ...
flux Flux describes any effect that appears to pass or travel (whether it actually moves or not) through a surface or substance. Flux is a concept in applied mathematics and vector calculus which has many applications to physics. For transport ...
es. They remain aloft for an average of ~3 days, a time long enough for being transported across oceans and continents until being finally deposited, eventually helped by water condensation and precipitation processes; microbial aerosols themselves can contribute to form clouds and trigger precipitation by serving as
cloud condensation nuclei Cloud condensation nuclei (CCNs), also known as cloud seeds, are small particles typically 0.2 µm, or one hundredth the size of a cloud droplet. CCNs are a unique subset of aerosols in the atmosphere on which water vapour condenses. This c ...
and
ice nuclei An ice nucleus, also known as an ice nucleating particle (INP), is a particle which acts as the nucleus for the formation of an ice crystal in the atmosphere. Ice Nucleation Mechanisms There are a number of mechanisms of ice nucleation in the atmo ...
. Living airborne microorganisms may end up concretizing aerial dispersion by colonizing their new habitat, provided that they survive their journey from emission to deposition. Bacterial survival is indeed naturally impaired during atmospheric transport, but a fraction remains viable. At high altitude, the peculiar environments offered by cloud droplets are thus regarded in some aspects as temporary microbial habitats, providing water and nutrients to airborne living cells. In addition, the detection of low levels of
heterotrophy A heterotroph (; ) is an organism that cannot produce its own food, instead taking nutrition from other sources of organic carbon, mainly plant or animal matter. In the food chain, heterotrophs are primary, secondary and tertiary consumers, but ...
raises questions about microbial functioning in cloud water and its potential influence on the chemical reactivity of these complex and dynamic environments. The metabolic functioning of microbial cells in clouds is still albeit unknown, while fundamental for apprehending microbial life conditions during long distance aerial transport and their geochemical and ecological impacts. Aerosols affect cloud formation, thereby influencing sunlight
irradiation Irradiation is the process by which an object is exposed to radiation. The exposure can originate from various sources, including natural sources. Most frequently the term refers to ionizing radiation, and to a level of radiation that will serve ...
and precipitation, but the extent to which and the manner in which they influence climate remains uncertain. Marine aerosols consist of a complex mixture of sea salt, non-sea-salt sulfate and organic molecules and can function as nuclei for cloud condensation, influencing the
radiation balance Earth's energy budget accounts for the balance between the energy that Earth receives from the Sun and the energy the Earth loses back into outer space. Smaller energy sources, such as Earth's internal heat, are taken into consideration, but ...
and, hence, climate. For example, biogenic aerosols in remote marine environments (for example, the Southern Ocean) can increase the number and size of cloud droplets, having similar effects on climate as aerosols in highly polluted regions. Specifically,
phytoplankton Phytoplankton () are the autotrophic (self-feeding) components of the plankton community and a key part of ocean and freshwater ecosystems. The name comes from the Greek words (), meaning 'plant', and (), meaning 'wanderer' or 'drifter'. ...
emit
dimethylsulfide Dimethyl sulfide (DMS) or methylthiomethane is an organosulfur compound with the formula (CH3)2S. Dimethyl sulfide is a flammable liquid that boils at and has a characteristic disagreeable odor. It is a component of the smell produced from cook ...
, and its derivate
sulfate The sulfate or sulphate ion is a polyatomic anion with the empirical formula . Salts, acid derivatives, and peroxides of sulfate are widely used in industry. Sulfates occur widely in everyday life. Sulfates are salts of sulfuric acid and many ...
promotes cloud condensation. Understanding the ways in which marine phytoplankton contribute to aerosols will allow better predictions of how changing ocean conditions will affect clouds and feed back on climate. In addition, the atmosphere itself contains about 1022 microbial cells, and determining the ability of atmospheric microorganisms to grow and form aggregates will be valuable for assessing their influence on climate.Cavicchioli, R., Ripple, W.J., Timmis, K.N., Azam, F., Bakken, L.R., Baylis, M., Behrenfeld, M.J., Boetius, A., Boyd, P.W., Classen, A.T. and Crowther, T.W. (2019) "Scientists' warning to humanity: microorganisms and climate change". ''Nature Reviews Microbiology'', 17: 569–586. After the tantalizing detection of
phosphine Phosphine (IUPAC name: phosphane) is a colorless, flammable, highly toxic compound with the chemical formula , classed as a pnictogen hydride. Pure phosphine is odorless, but technical grade samples have a highly unpleasant odor like rotting ...
(PH3) in the atmosphere of the
Venus Venus is the second planet from the Sun. It is sometimes called Earth's "sister" or "twin" planet as it is almost as large and has a similar composition. As an interior planet to Earth, Venus (like Mercury) appears in Earth's sky never f ...
planet, and in the absence of a known and plausible chemical mechanism to explain the formation of this molecule, Greaves ''et al.'' speculated in 2020 that microorganisms might be present in suspension in the Venus atmosphere. They have formulated the hypothesis of the microbial formation of phosphine, envisaging the possibility of a liveable window in the Venusian clouds at a certain altitude with an acceptable temperature range for microbial life. However, in 2021 Hallsworth ''et al.'' examined the conditions required to support the life of
extremophile An extremophile (from Latin ' meaning "extreme" and Greek ' () meaning "love") is an organism that is able to live (or in some cases thrive) in extreme environments, i.e. environments that make survival challenging such as due to extreme tem ...
microorganisms in the clouds at high altitude in the Venus atmosphere where favorable temperature conditions might prevail. Beside the presence of
sulfuric acid Sulfuric acid (American spelling and the preferred IUPAC name) or sulphuric acid ( Commonwealth spelling), known in antiquity as oil of vitriol, is a mineral acid composed of the elements sulfur, oxygen and hydrogen, with the molecular fo ...
in the clouds which already represent a major challenge for the survival of most of microorganisms, they came to the conclusion that the Venus atmosphere is too dry to host microbial life. They determined a
water activity Water activity (''aw'') is the partial vapor pressure of water in a solution divided by the standard state partial vapor pressure of water. In the field of food science, the standard state is most often defined as pure water at the same tempe ...
≤ 0.004, two orders of magnitude below the 0.585 limit for known extremophiles.


Airborne microbiomes

File:Biological niches in aeromicrobiology.webp, While the physical and chemical properties of airborne
particulate matter Particulates – also known as atmospheric aerosol particles, atmospheric particulate matter, particulate matter (PM) or suspended particulate matter (SPM) – are microscopic particles of solid or liquid matter suspended in the air. The te ...
have been extensively studied, their associated airborne
microbiome A microbiome () is the community of microorganisms that can usually be found living together in any given habitat. It was defined more precisely in 1988 by Whipps ''et al.'' as "a characteristic microbial community occupying a reasonably wel ...
remains largely unexplored. Modified text was copied from this source, which is available under
Creative Commons Attribution 4.0 International License
Microbiomes are defined as characteristic
microbial communities Microbial population biology is the application of the principles of population biology to microorganisms. Distinguishing from other biological disciplines Microbial population biology, in practice, is the application of population ecology and popu ...
, which include
prokaryote A prokaryote () is a single-celled organism that lacks a nucleus and other membrane-bound organelles. The word ''prokaryote'' comes from the Greek πρό (, 'before') and κάρυον (, 'nut' or 'kernel').Campbell, N. "Biology:Concepts & Con ...
s,
fungi A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately fr ...
,
protozoa Protozoa (singular: protozoan or protozoon; alternative plural: protozoans) are a group of single-celled eukaryotes, either free-living or parasitic, that feed on organic matter such as other microorganisms or organic tissues and debris. Histo ...
, other micro-
eukaryote Eukaryotes () are organisms whose cells have a nucleus. All animals, plants, fungi, and many unicellular organisms, are Eukaryotes. They belong to the group of organisms Eukaryota or Eukarya, which is one of the three domains of life. Bacter ...
s and
virus A virus is a submicroscopic infectious agent that replicates only inside the living cells of an organism. Viruses infect all life forms, from animals and plants to microorganisms, including bacteria and archaea. Since Dmitri Ivanovsk ...
es, that occupy well-defined habitats. Modified text was copied from this source, which is available under
Creative Commons Attribution 4.0 International License
The term microbiome is broader than other terms, for example, microbial communities, microbial population, microbiota or microbial flora, as microbiome refers to both its composition (the microorganisms involved) and its functions (their members' activities and interactions with the host/environment), which contribute to ecosystem functions. Modified text was copied from this source, which is available under
Creative Commons Attribution 4.0 International License
Throughout Earth's history, microbial communities have changed the climate, and climate has shaped microbial communities. Microorganisms can modify ecosystem processes or biogeochemistry on a global scale, and we start to uncover their role and potential involvement in changing the climate. However, the effects of climate change on microbial communities (i.e., diversity, dynamics, or distribution) are rarely addressed. In the case of fungal aerobiota, its composition is likely influenced by dispersal ability, rather than season or climate. Indeed, the origin of air masses from marine, terrestrial, or anthropogenic-impacted environments, mainly shapes the atmospheric air microbiome. However, recent studies have shown that meteorological factors and seasonality influence the composition of airborne bacterial communities. This evidence suggests that climatic conditions may act as an environmental filter for the aeroplankton, selecting a subset of species from the regional pool, and raises the question of the relative importance of the different factors affecting both bacterial and eukaryal aeroplankton. In 2020, Archer ''et al.'' reported evidence for a dynamic microbial presence at the ocean–atmosphere interface at the
Great Barrier Reef The Great Barrier Reef is the world's largest coral reef system composed of over 2,900 individual reefs and 900 islands stretching for over over an area of approximately . The reef is located in the Coral Sea, off the coast of Queensland, A ...
, and identified air mass trajectories over oceanic and continental surfaces associated with observed shifts in airborne bacterial and fungal diversity. Relative abundance of shared taxa between air and coral microbiomes varied between 2.2 and 8.8% and included those identified as part of the core coral microbiome. Above marine systems, the abundance of microorganisms decreases exponentially with distance from land, but relatively little is known about potential patterns in biodiversity for airborne microorganisms above the oceans. Here we test the hypothesis that persistent microbial inputs to the ocean–atmosphere interface of the Great Barrier Reef ecosystem vary according to surface cover (i.e. land vs. ocean) during transit of the air-mass. Modified text was copied from this source, which is available under
Creative Commons Attribution 4.0 International License


Gallery

File:Pteridophyta spores in the air of Lublin.png,
Pteridophyta A pteridophyte is a vascular plant (with xylem and phloem) that disperses spores. Because pteridophytes produce neither flowers nor seeds, they are sometimes referred to as " cryptogams", meaning that their means of reproduction is hidden. Ferns ...
spores, including fern spores, in the air of Lublin File:Some Airborne Fungal Spores.jpg, Airborne fungal spores


See also

*
Aeolian processes Aeolian processes, also spelled eolian, pertain to wind activity in the study of geology and weather and specifically to the wind's ability to shape the surface of the Earth (or other planets). Winds may erode, transport, and deposit mate ...
*
Aerobiology Aerobiology (from Greek ἀήρ, ''aēr'', "air"; βίος, ''bios'', "life"; and -λογία, ''-logia'') is a branch of biology that studies organic particles, such as bacteria, fungal spores, very small insects, pollen grains and viruses, ...
* Airborne transmission *
Biological dispersal Biological dispersal refers to both the movement of individuals (animals, plants, fungi, bacteria, etc.) from their birth site to their breeding site ('natal dispersal'), as well as the movement from one breeding site to another ('breeding di ...
** Dispersal vector **
Seed dispersal In Spermatophyte plants, seed dispersal is the movement, spread or transport of seeds away from the parent plant. Plants have limited mobility and rely upon a variety of dispersal vectors to transport their seeds, including both abiotic vector ...
* Organisms at high altitude *
Palynology Palynology is the "study of dust" (from grc-gre, παλύνω, palynō, "strew, sprinkle" and ''-logy'') or of "particles that are strewn". A classic palynologist analyses particulate samples collected from the air, from water, or from deposit ...


References


General reference

*


External links


Living on the air
{{plankton Ecology terminology Planktology