Arcobacter Suis
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''Arcobacter'' is a
genus Genus (; : genera ) is a taxonomic rank above species and below family (taxonomy), family as used in the biological classification of extant taxon, living and fossil organisms as well as Virus classification#ICTV classification, viruses. In bino ...
of
Gram-negative Gram-negative bacteria are bacteria that, unlike gram-positive bacteria, do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. Their defining characteristic is that their cell envelope consists ...
, spiral-shaped
bacteria Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one Cell (biology), biological cell. They constitute a large domain (biology), domain of Prokaryote, prokaryotic microorganisms. Typically a few micr ...
in the phylum
Campylobacterota Campylobacterota are a phylum of Gram-negative bacteria. Taxonomy Until the 2021 revision of bacterial taxonomy by the ICSP, the entire phylum was classified within the Proteobacteria (synonym Pseudomonadota) as the Epsilonproteobacteria and ...
.Madigan T, ''et al'' (2009) ''Brock Biology of Microorganisms'', 12th edition. San Francisco: Pearson Education It shows an unusually wide range of habitats, and some species can be human and animal
pathogens In biology, a pathogen (, "suffering", "passion" and , "producer of"), in the oldest and broadest sense, is any organism or agent that can produce disease. A pathogen may also be referred to as an infectious agent, or simply a germ. The term ...
. Species of the genus ''Arcobacter'' are found in both animal and environmental sources, making them unique among the Campylobacterota.


Taxonomy

This genus currently consists of five species: ''A. butzleri'', ''A. cryaerophilus'', ''A. skirrowii'', ''A. nitrofigilis'', and ''A. sulfidicus'', although several other potential novel species have recently been described from varying environments. Three of these five known species are pathogenic. Members of this genus were first isolated in 1977 from aborted bovine fetuses. They are aerotolerant, ''
Campylobacter ''Campylobacter'' is a type of bacteria that can cause a diarrheal disease in people. Its name means "curved bacteria", as the germ typically appears in a comma or "s" shape. According to its scientific classification, it is a genus of gram-negat ...
''-like organisms, previously classified as ''Campylobacter''. The genus ''Arcobacter'', in fact, was created as recently as 1992. Although they are similar to this other genus, ''Arcobacter'' species can grow at lower temperatures than ''Campylobacter'', as well as in the air, which ''Campylobacter'' cannot.Emerging Infectious Diseases
dc.gov


Name

The name ''Arcobacter'' is derived from the Latin ''arcus'' meaning "bow" and the Greek ''bacter'' meaning "rod", and should be understood to mean "bow-shaped rod" or "curved rod". This is a reference to the characteristic curved shaped that most ''Arcobacter'' cells possess.


Pathogenicity

''Arcobacter'' species have been discovered as both animal and human pathogens within the past decade, due to improvements in isolation techniques. Up to now, little is known about the mechanisms of pathogenicity or potential virulence factors of ''Arcobacter'' spp. Since no routine diagnostic of these bacteria has been performed, the global prevalence of ''Arcobacter'' infection is rather underestimated and the exact routes of transmission are unknown. Some evidence indicates livestock animals may be a significant reservoir of ''Arcobacter'', and over the last few years, the presence of these organisms in raw meat products, as well as in surface and ground water, has received increasing attention. In humans, ''A. butzleri'', and less commonly, ''A. cryaerophilus'', have been linked to
enteritis Enteritis is inflammation of the small intestine. It is most commonly caused by food or drink contaminated with pathogenic microbes,Dugdale, David C., IIII, and George F Longretc"Enteritis" MedlinePlus Medical Encyclopedia, 18 October 2008. Acces ...
and occasionally
bacteremia Bloodstream infections (BSIs) are infections of blood caused by blood-borne pathogens. The detection of microbes in the blood (most commonly accomplished by blood cultures) is always abnormal. A bloodstream infection is different from sepsis, wh ...
. Symptoms of ''A. butzleri'' infections include diarrhea associated with abdominal pain, nausea, and vomiting or fever. Studies of patients infected with ''A. butzleri'' have demonstrated that without treatment, symptoms endured for a very variable amount of time, from two days to several weeks. When antimicrobial therapies were administered, the infection was eradicated within a few days, and all strains in the study were found to be susceptible to the antibiotics given. A third species, ''A. skirrowii'', has also recently been isolated from a patient with chronic diarrhea. Although the microbiological and clinical features of ''Arcobacter'' are not yet well defined, initial studies of ''A. butzleri'' suggest that these bacteria display similar microbiological and clinical features as '' C. jejuni'', but are more associated with a persistent, watery diarrhea than with the bloody diarrhea associated with ''C. jejuni''. Recent studies suggest that ''A. butzleri'' induces epithelial barrier dysfunction by changes in
tight junction Tight junctions, also known as occluding junctions or ''zonulae occludentes'' (singular, ''zonula occludens''), are multiprotein Cell junction, junctional complexes between epithelial cells, sealing and preventing leakage of solutes and water. Th ...
proteins and induction of epithelial
apoptosis Apoptosis (from ) is a form of programmed cell death that occurs in multicellular organisms and in some eukaryotic, single-celled microorganisms such as yeast. Biochemistry, Biochemical events lead to characteristic cell changes (Morphology (biol ...
. Based on this model, the virulence of ''A. butzleri'' seems to have two phases. An initial effect on tight junctions was observed first, followed by a late effect on cytotoxicity because of
necrosis Necrosis () is a form of cell injury which results in the premature death of cells in living tissue by autolysis. The term "necrosis" came about in the mid-19th century and is commonly attributed to German pathologist Rudolf Virchow, who i ...
and induction of apoptosis.


Nonpathogenic strains

''A. nitrofigilis'' is a
nitrogen-fixing Nitrogen fixation is a chemical process by which molecular dinitrogen () is converted into ammonia (). It occurs both biologically and abiological nitrogen fixation, abiologically in chemical industry, chemical industries. Biological nitrogen ...
bacterium isolated from the roots of the salt marsh plant ''
Spartina alterniflora ''Sporobolus alterniflorus'', or synonymously known as ''Spartina alterniflora'', the smooth cordgrass, saltmarsh cordgrass, or salt-water cordgrass, is a perennial deciduous grass which is found in intertidal wetlands, especially estuarine salt ...
''. ''A. sulfidicus'' is an obligate microaerophile that oxidizes sulfides and is an
autotrophic An autotroph is an organism that can convert abiotic sources of energy into energy stored in organic compounds, which can be used by other organisms. Autotrophs produce complex organic compounds (such as carbohydrates, fats, and proteins) us ...
producer of filamentous
sulfur Sulfur ( American spelling and the preferred IUPAC name) or sulphur ( Commonwealth spelling) is a chemical element; it has symbol S and atomic number 16. It is abundant, multivalent and nonmetallic. Under normal conditions, sulfur atoms ...
. Large populations of this bacterium produce mats of this solid, white sulfur filament. These mats are useful in anchoring the bacteria to rocky surfaces in the face of flowing subsurface hydrothermal fluids, as well as providing important carpeting around
hydrothermal vents Hydrothermal vents are fissures on the seabed from which geothermally heated water discharges. They are commonly found near volcanically active places, areas where tectonic plates are moving apart at mid-ocean ridges, ocean basins, and hots ...
that attracts other animals to that site and encourages them to settle and grow. One interesting potential novel ''Arcobacter'' species, designated LA31BT, was isolated from water collected from a
hypersaline A hypersaline lake is a landlocked body of water that contains significant concentrations of sodium chloride, brines, and other salts, with saline levels surpassing those of ocean water (3.5%, i.e. ). Specific microbial species can thrive i ...
lagoon. Preliminary characterization based on
16S rRNA 16S ribosomal RNA (or 16Svedberg, S rRNA) is the RNA component of the 30S subunit of a prokaryotic ribosome (SSU rRNA). It binds to the Shine-Dalgarno sequence and provides most of the SSU structure. The genes coding for it are referred to as ...
gene sequence analysis showed that LA31BT shared 94% identity with ''A. nitrofigilis'', the
type species In International_Code_of_Zoological_Nomenclature, zoological nomenclature, a type species (''species typica'') is the species name with which the name of a genus or subgenus is considered to be permanently taxonomically associated, i.e., the spe ...
of the genus, and
taxonomic 280px, Generalized scheme of taxonomy Taxonomy is a practice and science concerned with classification or categorization. Typically, there are two parts to it: the development of an underlying scheme of classes (a taxonomy) and the allocation ...
studies confirmed the phylogenetic affiliation of strain LA31BT to the genus ''Arcobacter''. Other analytical methods, however, showed that LA31BT was distinct from all recognized ''Arcobacter'' species. Most notably and of interest, LA31BT was found to be an obligate
halophile A halophile (from the Greek word for 'salt-loving') is an extremophile that thrives in high salt In common usage, salt is a mineral composed primarily of sodium chloride (NaCl). When used in food, especially in granulated form, it is more ...
, a trait not found among recognized ''Arcobacter'' species. Another unusual ''Arcobacter'' species, designated strain CAB, was isolated from marine sediment and found to have the capacity to grow via
perchlorate A perchlorate is a chemical compound containing the perchlorate ion, , the conjugate base of perchloric acid (ionic perchlorate). As counterions, there can be metal cations, quaternary ammonium cations or other ions, for example, nitronium cat ...
reduction, the only member of the Campylobacterota in pure culture to possess this rare metabolism. Unlike most ''Arcobacter'' species, CAB was found to degrade carbohydrates, including
fructose Fructose (), or fruit sugar, is a Ketose, ketonic monosaccharide, simple sugar found in many plants, where it is often bonded to glucose to form the disaccharide sucrose. It is one of the three dietary monosaccharides, along with glucose and gal ...
and
catechol Catechol ( or ), also known as pyrocatechol or 1,2-dihydroxybenzene, is an organic compound with the molecular formula . It is the ''ortho'' isomer of the three isomeric benzenediols. This colorless compound occurs naturally in trace amounts. It ...
, and its cells often lacked the distinctive curvature typical of the genus ''Arcobacter''.


Phylogeny

The currently accepted taxonomy is based on the
List of Prokaryotic names with Standing in Nomenclature List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclatu ...
(LPSN) and
National Center for Biotechnology Information The National Center for Biotechnology Information (NCBI) is part of the National Library of Medicine (NLM), a branch of the National Institutes of Health (NIH). It is approved and funded by the government of the United States. The NCBI is lo ...
(NCBI) Species incertae sedis: * "''Aliarcobacter hispanicus''" Pérez-Cataluña et al. 2018b nom. nud. * "''Arcobacter peruensis''" Callbeck et al. 2019 * "''Arcobacter ponticus''" Cataluña 2018 * "''Arcobacter salis''" Cataluña 2018 * "''Ca.'' Arcobacter sulfidicus" Wirsen et al. 2002


See also

*
List of bacterial orders This article lists the orders of the Bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI) and the phylogeny is based on 16 ...
*
List of bacteria genera This article lists the genera of the bacteria Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one Cell (biology), biological cell. They constitute a large domain (biology), domain of Prokaryote, ...


References

{{Taxonbar, from=Q4787427 Gram-negative bacteria Campylobacterota Pathogenic bacteria Bacteria genera