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Monothalamea
"Monothalamea" is a grouping of foraminiferans, traditionally consisting of all foraminifera with single-chambered tests. Recent work has shown that the grouping is paraphyletic, and as such does not constitute a natural group; nonetheless, the name "monothalamea" continues to be used by foraminifera workers out of convenience. Classification "Monothalamea" traditionally contains two groups, neither of which is currently considered to be monophyletic: * "Allogromiida" traditionally consists of all foraminifera which lack a mineralised test, instead having a test of tectin. Recent work has shown that this grouping is paraphyletic. * "Astrorhizida" traditionally consists of all foraminifera with single-chambered, agglutinated tests. Recent work has shown that this grouping is polyphyletic, as agglutinated tests have evolved from proteinaceous tests multiple times throughout foraminiferal evolution. Recent molecular evidence has revealed that the deep-sea xenophyophores are in f ...
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Monothalamea
"Monothalamea" is a grouping of foraminiferans, traditionally consisting of all foraminifera with single-chambered tests. Recent work has shown that the grouping is paraphyletic, and as such does not constitute a natural group; nonetheless, the name "monothalamea" continues to be used by foraminifera workers out of convenience. Classification "Monothalamea" traditionally contains two groups, neither of which is currently considered to be monophyletic: * "Allogromiida" traditionally consists of all foraminifera which lack a mineralised test, instead having a test of tectin. Recent work has shown that this grouping is paraphyletic. * "Astrorhizida" traditionally consists of all foraminifera with single-chambered, agglutinated tests. Recent work has shown that this grouping is polyphyletic, as agglutinated tests have evolved from proteinaceous tests multiple times throughout foraminiferal evolution. Recent molecular evidence has revealed that the deep-sea xenophyophores are in f ...
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Xenophyophore
Xenophyophorea is a clade of foraminiferans. Members of this class are multinucleate unicellular organisms found on the ocean floor throughout the world's oceans, at depths of . They are a kind of foraminiferan that extract minerals from their surroundings and use them to form an exoskeleton known as a test. They were first described by Henry Bowman Brady in 1883. They are abundant on abyssal plains, and in some regions are the dominant species. Fifteen genera and 75 species have been described, varying widely in size. The largest, ''Syringammina fragilissima'', is among the largest known coenocytes, reaching up to in diameter. Naming and classification The name Xenophyophora means "bearer of foreign bodies", from the Greek. This refers to the sediments, called xenophyae, which are cemented together to construct their tests. In 1883, Henry Bowman Brady classified them as primitive Foraminifera. Later they were placed within the sponges. In the beginning of th ...
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Foraminifera
Foraminifera (; Latin for "hole bearers"; informally called "forams") are single-celled organisms, members of a phylum or class of amoeboid protists characterized by streaming granular ectoplasm for catching food and other uses; and commonly an external shell (called a "test") of diverse forms and materials. Tests of chitin (found in some simple genera, and Textularia in particular) are believed to be the most primitive type. Most foraminifera are marine, the majority of which live on or within the seafloor sediment (i.e., are benthic), while a smaller number float in the water column at various depths (i.e., are planktonic), which belong to the suborder Globigerinina. Fewer are known from freshwater or brackish conditions, and some very few (nonaquatic) soil species have been identified through molecular analysis of small subunit ribosomal DNA. Foraminifera typically produce a test, or shell, which can have either one or multiple chambers, some becoming quite elaborate ...
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Foraminifera
Foraminifera (; Latin for "hole bearers"; informally called "forams") are single-celled organisms, members of a phylum or class of amoeboid protists characterized by streaming granular ectoplasm for catching food and other uses; and commonly an external shell (called a "test") of diverse forms and materials. Tests of chitin (found in some simple genera, and Textularia in particular) are believed to be the most primitive type. Most foraminifera are marine, the majority of which live on or within the seafloor sediment (i.e., are benthic), while a smaller number float in the water column at various depths (i.e., are planktonic), which belong to the suborder Globigerinina. Fewer are known from freshwater or brackish conditions, and some very few (nonaquatic) soil species have been identified through molecular analysis of small subunit ribosomal DNA. Foraminifera typically produce a test, or shell, which can have either one or multiple chambers, some becoming quite elaborate ...
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Rhizaria Classes
The Rhizaria are an ill-defined but species-rich supergroup of mostly unicellular eukaryotes. Except for the Chlorarachniophytes and three species in the genus Paulinella in the phylum Cercozoa, they are all non-photosynthethic, but many foraminifera and radiolaria have a symbiotic relationship with unicellular algae. A multicellular form, ''Guttulinopsis vulgaris'', a cellular slime mold, has also been described. This group was used by Cavalier-Smith in 2002, although the term "Rhizaria" had been long used for clades within the currently recognized taxon. Being described mainly from rDNA sequences, they vary considerably in form, having no clear morphological distinctive characters (synapomorphies), but for the most part they are amoeboids with filose, reticulose, or microtubule-supported pseudopods. In the absence of an apomorphy, the group is ill-defined, and its composition has been very fluid. Some Rhizaria possess mineral exoskeleton (thecae or loricas), which is in diffe ...
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Allogromiida
The Allogromiida is an order of single-chambered, mostly organic-walled foraminiferans, including some that produce agglutinated tests (Lagynacea). Genetic studies indicate that some foraminiferans with agglutinated tests, previously included in the Textulariida or as their own order Astrorhizida, may also belong here. Allogromiids produce relatively simple tests, usually with a single chamber, similar to those of other protists such as ''Gromia''. They are found as both marine and freshwater forms, and are the oldest forms known from the fossil record. Genus * ''Allogromia ''Allogromia'' is a genus of Foraminifera Foraminifera (; Latin for "hole bearers"; informally called "forams") are single-celled organisms, members of a phylum or class of amoeboid protists characterized by streaming granular ectoplasm fo ...'' References * * * Further reading * Foraminifera orders Monothalamea Extant Cambrian first appearances {{foram-stub ...
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Xenophyophorea
Xenophyophorea is a clade of foraminiferans. Members of this class are multinucleate unicellular organisms found on the ocean floor throughout the world's oceans, at depths of . They are a kind of foraminiferan that extract minerals from their surroundings and use them to form an exoskeleton known as a test. They were first described by Henry Bowman Brady in 1883. They are abundant on abyssal plains, and in some regions are the dominant species. Fifteen genera and 75 species have been described, varying widely in size. The largest, ''Syringammina fragilissima'', is among the largest known coenocytes, reaching up to in diameter. Naming and classification The name Xenophyophora means "bearer of foreign bodies", from the Greek. This refers to the sediments, called xenophyae, which are cemented together to construct their tests. In 1883, Henry Bowman Brady classified them as primitive Foraminifera. Later they were placed within the sponges. In the beginning of th ...
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National Oceanic And Atmospheric Administration
The National Oceanic and Atmospheric Administration (abbreviated as NOAA ) is an United States scientific and regulatory agency within the United States Department of Commerce that forecasts weather, monitors oceanic and atmospheric conditions, charts the seas, conducts deep sea exploration, and manages fishing and protection of marine mammals and endangered species in the U.S. exclusive economic zone. Purpose and function NOAA's specific roles include: * ''Supplying Environmental Information Products''. NOAA supplies to its customers and partners information pertaining to the state of the oceans and the atmosphere, such as weather warnings and forecasts via the National Weather Service. NOAA's information services extend as well to climate, ecosystems, and commerce. * ''Providing Environmental Stewardship Services''. NOAA is a steward of U.S. coastal and marine environments. In coordination with federal, state, local, tribal and international authorities, NOAA manages th ...
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Environmental DNA
Environmental DNA or eDNA is DNA that is collected from a variety of environmental samples such as soil, seawater, snow or air, rather than directly sampled from an individual organism. As various organisms interact with the environment, DNA is expelled and accumulates in their surroundings from various sources. In recent years, eDNA has been used as a tool to detect endangered wildlife that were otherwise unseen. In 2020, human health researchers began repurposing eDNA techniques to track the COVID-19 pandemic. Example sources of eDNA include, but are not limited to, feces, mucus, gametes, shed skin, carcasses and hair. Samples can be analyzed by high-throughput DNA sequencing methods, known as metagenomics, metabarcoding, and single-species detection, for rapid monitoring and measurement of biodiversity. In order to better differentiate between organisms within a sample, DNA metabarcoding is used in which the sample is analyzed and uses previously studied DNA librar ...
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Ribosomal DNA
Ribosomal DNA (rDNA) is a DNA sequence that codes for ribosomal RNA. These sequences regulate transcription initiation and amplification, and contain both transcribed and non-transcribed spacer segments. In the human genome there are 5 chromosomes with nucleolus organizer regions: the acrocentric chromosomes 13 (RNR1), 14 (RNR2), 15 (RNR3), 21 ( RNR4) and 22 (RNR5). The genes that are responsible for encoding the various sub-units of rRNA are located across multiple chromosomes in humans. But the genes that encode for rRNA are highly conserved across the domains, with only the copy numbers involved for the genes having varying numbers per species. In Bacteria, Archaea, and chloroplasts the rRNA is composed of different (smaller) units, the large (23S) ribosomal RNA, 16S ribosomal RNA and 5S rRNA. The 16S rRNA is widely used for phylogenetic studies. Eukaryotes The rRNA transcribed from the approximately 600 r DNA repeats forms the most abundant section of RNA found ...
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SSU RRNA
Small subunit ribosomal ribonucleic acid (SSU rRNA) is the smaller of the two major RNA components of the ribosome. Associated with a number of ribosomal proteins, the SSU rRNA forms the small subunit of the ribosome. It is encoded by SSU- rDNA. Characteristics Use in phylogenetics SSU rRNA sequences are widely used for determining evolutionary relationships among organisms, since they are of ancient origin and are found in all known forms of life. See also *LSU rRNA Large subunit ribosomal ribonucleic acid (LSU rRNA) is the largest of the two major RNA components of the ribosome. Associated with a number of ribosomal proteins, the LSU rRNA forms the large subunit of the ribosome. The LSU rRNA acts as a rib ...: the large subunit ribosomal ribonucleic acid. References {{Ribosome subunits Ribosomal RNA Protein biosynthesis ...
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Protist
A protist () is any eukaryotic organism (that is, an organism whose cells contain a cell nucleus) that is not an animal, plant, or fungus. While it is likely that protists share a common ancestor (the last eukaryotic common ancestor), the exclusion of other eukaryotes means that protists do not form a natural group, or clade. Therefore, some protists may be more closely related to animals, plants, or fungi than they are to other protists. However, like the groups ''algae'', '' invertebrates'', and ''protozoans'', the biological category ''protist'' is used for convenience. Others classify any unicellular eukaryotic microorganism as a protist. The study of protists is termed protistology. History The classification of a third kingdom separate from animals and plants was first proposed by John Hogg in 1860 as the kingdom Protoctista; in 1866 Ernst Haeckel also proposed a third kingdom Protista as "the kingdom of primitive forms". Originally these also included prokaryote ...
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