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Marginal Likelihood
A marginal likelihood is a likelihood function that has been integrated over the parameter space. In Bayesian statistics, it represents the probability of generating the observed sample for all possible values of the parameters; it can be understood as the probability of the model itself and is therefore often referred to as model evidence or simply evidence. Due to the integration over the parameter space, the marginal likelihood does not directly depend upon the parameters. If the focus is not on model comparison, the marginal likelihood is simply the normalizing constant that ensures that the posterior is a proper probability. It is related to the partition function in statistical mechanics. Concept Given a set of independent identically distributed data points \mathbf=(x_1,\ldots,x_n), where x_i \sim p(x, \theta) according to some probability distribution parameterized by \theta, where \theta itself is a random variable described by a distribution, i.e. \theta \sim p(\t ...
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Likelihood Function
A likelihood function (often simply called the likelihood) measures how well a statistical model explains observed data by calculating the probability of seeing that data under different parameter values of the model. It is constructed from the joint probability distribution of the random variable that (presumably) generated the observations. When evaluated on the actual data points, it becomes a function solely of the model parameters. In maximum likelihood estimation, the argument that maximizes the likelihood function serves as a point estimate for the unknown parameter, while the Fisher information (often approximated by the likelihood's Hessian matrix at the maximum) gives an indication of the estimate's precision. In contrast, in Bayesian statistics, the estimate of interest is the ''converse'' of the likelihood, the so-called posterior probability of the parameter given the observed data, which is calculated via Bayes' rule. Definition The likelihood function, ...
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Monte Carlo Method
Monte Carlo methods, or Monte Carlo experiments, are a broad class of computational algorithms that rely on repeated random sampling to obtain numerical results. The underlying concept is to use randomness to solve problems that might be deterministic in principle. The name comes from the Monte Carlo Casino in Monaco, where the primary developer of the method, mathematician Stanisław Ulam, was inspired by his uncle's gambling habits. Monte Carlo methods are mainly used in three distinct problem classes: optimization, numerical integration, and generating draws from a probability distribution. They can also be used to model phenomena with significant uncertainty in inputs, such as calculating the risk of a nuclear power plant failure. Monte Carlo methods are often implemented using computer simulations, and they can provide approximate solutions to problems that are otherwise intractable or too complex to analyze mathematically. Monte Carlo methods are widely used in va ...
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Bayesian Information Criterion
In statistics, the Bayesian information criterion (BIC) or Schwarz information criterion (also SIC, SBC, SBIC) is a criterion for model selection among a finite set of models; models with lower BIC are generally preferred. It is based, in part, on the likelihood function and it is closely related to the Akaike information criterion (AIC). When fitting models, it is possible to increase the maximum likelihood by adding parameters, but doing so may result in overfitting. Both BIC and AIC attempt to resolve this problem by introducing a penalty term for the number of parameters in the model; the penalty term is larger in BIC than in AIC for sample sizes greater than 7. The BIC was developed by Gideon E. Schwarz and published in a 1978 paper, as a large-sample approximation to the Bayes factor. Definition The BIC is formally defined as : \mathrm = k\ln(n) - 2\ln(\widehat L). \ where *\hat L = the maximized value of the likelihood function of the model M, i.e. \hat L=p(x\mid\wid ...
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Marginal Probability
In probability theory and statistics, the marginal distribution of a subset of a collection of random variables is the probability distribution of the variables contained in the subset. It gives the probabilities of various values of the variables in the subset without reference to the values of the other variables. This contrasts with a conditional distribution, which gives the probabilities contingent upon the values of the other variables. Marginal variables are those variables in the subset of variables being retained. These concepts are "marginal" because they can be found by summing values in a table along rows or columns, and writing the sum in the margins of the table. The distribution of the marginal variables (the marginal distribution) is obtained by marginalizing (that is, focusing on the sums in the margin) over the distribution of the variables being discarded, and the discarded variables are said to have been marginalized out. The context here is that the theoretic ...
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Lindley's Paradox
Lindley's paradox is a counterintuitive situation in statistics in which the Bayesian and frequentist approaches to a hypothesis testing problem give different results for certain choices of the prior distribution. The problem of the disagreement between the two approaches was discussed in Harold Jeffreys' 1939 textbook; it became known as Lindley's paradox after Dennis Lindley called the disagreement a paradox in a 1957 paper. Although referred to as a ''paradox'', the differing results from the Bayesian and frequentist approaches can be explained as using them to answer fundamentally different questions, rather than actual disagreement between the two methods. Nevertheless, for a large class of priors the differences between the frequentist and Bayesian approach are caused by keeping the significance level fixed: as even Lindley recognized, "the theory does not justify the practice of keeping the significance level fixed" and even "some computations by Prof. Pearson in the ...
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Empirical Bayes Methods
Empirical Bayes methods are procedures for statistical inference in which the prior probability distribution is estimated from the data. This approach stands in contrast to standard Bayesian methods, for which the prior distribution is fixed before any data are observed. Despite this difference in perspective, empirical Bayes may be viewed as an approximation to a fully Bayesian treatment of a hierarchical model wherein the parameters at the highest level of the hierarchy are set to their most likely values, instead of being integrated out. Introduction Empirical Bayes methods can be seen as an approximation to a fully Bayesian treatment of a hierarchical Bayes model. In, for example, a two-stage hierarchical Bayes model, observed data y = \ are assumed to be generated from an unobserved set of parameters \theta = \ according to a probability distribution p(y\mid\theta)\,. In turn, the parameters \theta can be considered samples drawn from a population characterised by hy ...
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Odds
In probability theory, odds provide a measure of the probability of a particular outcome. Odds are commonly used in gambling and statistics. For example for an event that is 40% probable, one could say that the odds are or When gambling, odds are often given as the ratio of the possible net profit ''to'' the possible net loss. However in many situations, you pay the possible loss ("stake" or "wager") up front and, if you win, you are paid the net win plus you also get your stake returned. So wagering 2 at , pays out , which is called When Moneyline odds are quoted as a positive number , it means that a wager pays When Moneyline odds are quoted as a negative number , it means that a wager pays Odds have a simple relationship with probability. When probability is expressed as a number between 0 and 1, the relationships between probability and odds are as follows. Note that if probability is to be expressed as a percentage these probability values should be multiplied ...
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Bayes Factor
The Bayes factor is a ratio of two competing statistical models represented by their evidence, and is used to quantify the support for one model over the other. The models in question can have a common set of parameters, such as a null hypothesis and an alternative, but this is not necessary; for instance, it could also be a non-linear model compared to its linear approximation. The Bayes factor can be thought of as a Bayesian analog to the likelihood-ratio test, although it uses the integrated (i.e., marginal) likelihood rather than the maximized likelihood. As such, both quantities only coincide under simple hypotheses (e.g., two specific parameter values). Also, in contrast with null hypothesis significance testing, Bayes factors support evaluation of evidence ''in favor'' of a null hypothesis, rather than only allowing the null to be rejected or not rejected. Although conceptually simple, the computation of the Bayes factor can be challenging depending on the complexity of ...
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Prior Predictive Distribution
In Bayesian statistics, the posterior predictive distribution is the distribution of possible unobserved values conditional on the observed values. Given a set of ''N'' i.i.d. observations \mathbf = \, a new value \tilde will be drawn from a distribution that depends on a parameter \theta \in \Theta, where \Theta is the parameter space. :p(\tilde, \theta) It may seem tempting to plug in a single best estimate \hat for \theta, but this ignores uncertainty about \theta, and because a source of uncertainty is ignored, the predictive distribution will be too narrow. Put another way, predictions of extreme values of \tilde will have a lower probability than if the uncertainty in the parameters as given by their posterior distribution is accounted for. A posterior predictive distribution accounts for uncertainty about \theta. The posterior distribution of possible \theta values depends on \mathbf: : p(\theta, \mathbf) And the posterior predictive distribution of \tilde given \ma ...
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EM Algorithm
EM, Em or em may refer to: Arts and entertainment Music * Em, the E minor musical scale * Em, the E minor chord * Electronic music, music that employs electronic musical instruments and electronic music technology in its production * Encyclopedia Metallum, an online metal music database * Eminem, American rapper Other uses in arts and entertainment * ''Em'' (comic strip), a comic strip by Maria Smedstad Companies and organizations * Em (restaurant), a restaurant in Mexico City * Aero Benin (IATA code), a defunct airline * Empire Airlines (IATA code), a charter and cargo airline based in Idaho, US * Erasmus Mundus, an international student-exchange program * '' Estado de Minas'', a Brazilian newspaper * European Movement, an international lobbying association * ExxonMobil, a large oil company formed from the merger of Exxon and Mobil in 1999 * La République En Marche! (sometimes shortened to "En Marche!"), a major French political party Economics * Emerging markets, nations ...
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Metropolis–Hastings Algorithm
In statistics and statistical physics, the Metropolis–Hastings algorithm is a Markov chain Monte Carlo (MCMC) method for obtaining a sequence of random samples from a probability distribution from which direct sampling is difficult. New samples are added to the sequence in two steps: first a new sample is proposed based on the previous sample, then the proposed sample is either added to the sequence or rejected depending on the value of the probability distribution at that point. The resulting sequence can be used to approximate the distribution (e.g. to generate a histogram) or to compute an integral (e.g. an expected value). Metropolis–Hastings and other MCMC algorithms are generally used for sampling from multi-dimensional distributions, especially when the number of dimensions is high. For single-dimensional distributions, there are usually other methods (e.g. adaptive rejection sampling) that can directly return independent samples from the distribution, and these are ...
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